RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W AGA2P32781 87 aa6.64□□□□□ -1.35
PEX28YHR150W LNP1P38878 278 aa6.64□□□□□ -1.35
PEX28YHR150W SLZ1P40167 298 aa6.64□□□□□ -1.35
PEX28YHR150W QRI1P43123 477 aaKnown RBP6.64□□□□□ -1.35
PEX28YHR150W NIT2P47016 307 aa6.64□□□□□ -1.35
PEX28YHR150W RNH201P53942 307 aa6.64□□□□□ -1.35
PEX28YHR150W SAM50P53969 484 aa6.64□□□□□ -1.35
PEX28YHR150W SCP1Q08873 200 aa6.64□□□□□ -1.35
PEX28YHR150W PRS5Q12265 496 aaKnown RBP6.64□□□□□ -1.35
PEX28YHR150W PAR32Q12515 295 aaKnown RBP6.64□□□□□ -1.35
PEX28YHR150W MSW1P04803 379 aa6.64□□□□□ -1.35
PEX28YHR150W RFA1P22336 621 aaKnown RBP6.64□□□□□ -1.35
PEX28YHR150W MCM10P32354 571 aa6.64□□□□□ -1.35
PEX28YHR150W CUP9P41817 306 aa6.64□□□□□ -1.35
PEX28YHR150W UFD1P53044 361 aa6.64□□□□□ -1.35
PEX28YHR150W PKP2P53170 491 aa6.64□□□□□ -1.35
PEX28YHR150W ALG9P53868 555 aaKnown RBP6.64□□□□□ -1.35
PEX28YHR150W SKO1Q02100 647 aa6.64□□□□□ -1.35
PEX28YHR150W CTS2Q06350 511 aa6.64□□□□□ -1.35
PEX28YHR150W SDO1Q07953 250 aaKnown RBP6.64□□□□□ -1.35
PEX28YHR150W FAS1P07149 2051 aaKnown RBP6.64□□□□□ -1.35
PEX28YHR150W FMP27Q06179 2628 aa6.63□□□□□ -1.35
PEX28YHR150W YML003WP0CF16 290 aa6.63□□□□□ -1.35
PEX28YHR150W PCL1P24867 279 aa6.63□□□□□ -1.35
PEX28YHR150W GPI16P38875 610 aa6.63□□□□□ -1.35
PEX28YHR150W POG1P40473 351 aa6.63□□□□□ -1.35
PEX28YHR150W GTT1P40582 234 aa6.63□□□□□ -1.35
PEX28YHR150W YCL001W-AP87012 153 aa6.63□□□□□ -1.35
PEX28YHR150W LRS4Q04087 347 aaKnown RBP6.63□□□□□ -1.35
PEX28YHR150W YRA1Q12159 226 aaKnown RBP6.63□□□□□ -1.35
PEX28YHR150W VAM3Q12241 283 aa6.63□□□□□ -1.35
PEX28YHR150W OLE1P21147 510 aaKnown RBP6.62□□□□□ -1.35
PEX28YHR150W DAL82P21705 255 aa6.62□□□□□ -1.35
PEX28YHR150W APA2P22108 325 aa6.62□□□□□ -1.35
PEX28YHR150W YJR056CP47115 236 aa6.62□□□□□ -1.35
PEX28YHR150W ADO1P47143 340 aaKnown RBP6.62□□□□□ -1.35
PEX28YHR150W YPR147CQ06522 304 aaKnown RBP6.62□□□□□ -1.35
PEX28YHR150W HNT3Q08702 217 aa6.62□□□□□ -1.35
PEX28YHR150W YPR145C-AQ2V2P0 78 aa6.62□□□□□ -1.35
PEX28YHR150W COX1P00401 534 aa6.62□□□□□ -1.35
PEX28YHR150W COS9P36034 407 aa6.62□□□□□ -1.35
PEX28YHR150W ATG8P38182 117 aaRIP-Chip data6.62□□□□□ -1.35not detected
PEX28YHR150W FIG1P38224 298 aa6.62□□□□□ -1.35
PEX28YHR150W APD1P38281 316 aa6.62□□□□□ -1.35
PEX28YHR150W SHO1P40073 367 aa6.62□□□□□ -1.35
PEX28YHR150W SOL1P50278 321 aa6.62□□□□□ -1.35
PEX28YHR150W LCL3P53153 274 aa6.62□□□□□ -1.35
PEX28YHR150W APJ1P53940 528 aa6.62□□□□□ -1.35
PEX28YHR150W ERP1Q05359 219 aaKnown RBP6.62□□□□□ -1.35
PEX28YHR150W MCH4Q08268 501 aa6.62□□□□□ -1.35
PEX28YHR150W RDL2Q08742 149 aaKnown RBP6.62□□□□□ -1.35
PEX28YHR150W YOR376WQ08900 122 aa6.62□□□□□ -1.35
PEX28YHR150W YAL064W-BO13512 126 aa6.61□□□□□ -1.35
PEX28YHR150W SHM2P37291 469 aaKnown RBP6.61□□□□□ -1.35
PEX28YHR150W YEA6P39953 335 aa6.61□□□□□ -1.35
PEX28YHR150W AIR1P40507 360 aaKnown RBP6.61□□□□□ -1.35
PEX28YHR150W CGR1P53188 120 aa6.61□□□□□ -1.35
PEX28YHR150W YGR126WP53274 230 aa6.61□□□□□ -1.35
PEX28YHR150W CGI121Q03705 181 aaKnown RBP6.61□□□□□ -1.35
PEX28YHR150W YDR102CQ03864 110 aa6.61□□□□□ -1.35
PEX28YHR150W UBA3Q99344 299 aa6.61□□□□□ -1.35
PEX28YHR150W QCR2P07257 368 aa6.6□□□□□ -1.35
PEX28YHR150W MRS4P23500 304 aa6.6□□□□□ -1.35
PEX28YHR150W RFA3P26755 122 aaKnown RBP6.6□□□□□ -1.35
PEX28YHR150W EHD3P28817 500 aa6.6□□□□□ -1.35
PEX28YHR150W ARC40P38328 384 aaKnown RBP6.6□□□□□ -1.35
PEX28YHR150W YER010CP40011 234 aa6.6□□□□□ -1.35
PEX28YHR150W YJR011CP47086 261 aaPredicted RBP6.6□□□□□ -1.35
PEX28YHR150W HOL1P53389 586 aa6.6□□□□□ -1.35
PEX28YHR150W GPI15P53961 229 aa6.6□□□□□ -1.35
PEX28YHR150W VPS28Q02767 242 aa6.6□□□□□ -1.35
PEX28YHR150W YMR265CQ03508 461 aaKnown RBP6.6□□□□□ -1.35
PEX28YHR150W NUP53Q03790 475 aa6.6□□□□□ -1.35
PEX28YHR150W THI74Q04083 370 aa6.6□□□□□ -1.35
PEX28YHR150W YCT1Q12235 531 aa6.6□□□□□ -1.35
PEX28YHR150W SWM1Q12379 170 aa6.6□□□□□ -1.35
PEX28YHR150W YLL053CP0CD98 152 aa6.59□□□□□ -1.35
PEX28YHR150W SIP1P32578 815 aa6.59□□□□□ -1.35
PEX28YHR150W RIB5P38145 238 aa6.59□□□□□ -1.35
PEX28YHR150W RFC2P40348 353 aa6.59□□□□□ -1.35
PEX28YHR150W ATF1P40353 525 aa6.59□□□□□ -1.35
PEX28YHR150W VMA21P41806 77 aa6.59□□□□□ -1.35
PEX28YHR150W MRPL22P53881 309 aa6.59□□□□□ -1.35
PEX28YHR150W ADD37Q03233 198 aa6.59□□□□□ -1.35
PEX28YHR150W YMR279CQ03263 540 aa6.59□□□□□ -1.35
PEX28YHR150W TRS23Q03784 219 aa6.59□□□□□ -1.35
PEX28YHR150W GIS1Q03833 894 aa6.59□□□□□ -1.35
PEX28YHR150W MIX14Q04341 121 aa6.59□□□□□ -1.35
PEX28YHR150W FIT1Q04433 528 aa6.59□□□□□ -1.35
PEX28YHR150W YMR253CQ04835 414 aa6.59□□□□□ -1.35
PEX28YHR150W AKR2Q12013 749 aa6.59□□□□□ -1.35
PEX28YHR150W FRE7Q12333 620 aa6.59□□□□□ -1.35
PEX28YHR150W DGK1Q12382 290 aa6.59□□□□□ -1.35
PEX28YHR150W COX19Q3E731 98 aa6.59□□□□□ -1.35
PEX28YHR150W LSO2Q3E772 92 aaKnown RBP6.59□□□□□ -1.35
PEX28YHR150W YIL046W-AQ3E7Z4 54 aa6.59□□□□□ -1.35
PEX28YHR150W YPT1P01123 206 aaKnown RBP6.59□□□□□ -1.36
PEX28YHR150W RPP2BP02400 110 aaKnown RBP6.59□□□□□ -1.36
PEX28YHR150W SCEIP03882 235 aa6.59□□□□□ -1.36
PEX28YHR150W YHR214C-DP0CX93 97 aa6.59□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 94.4 ms