RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	ROX3	P25046	220 aa		4.4	□□□□□ -1.7
RSC30	YHR056C	VMA6	P32366	345 aa	Known RBP	4.4	□□□□□ -1.7
RSC30	YHR056C	MRPL36	P36531	177 aa		4.4	□□□□□ -1.7
RSC30	YHR056C	YND1	P40009	630 aa		4.4	□□□□□ -1.7
RSC30	YHR056C	PHM8	P40025	321 aa		4.4	□□□□□ -1.7
RSC30	YHR056C	VOA1	P53262	265 aa		4.4	□□□□□ -1.7
RSC30	YHR056C	COG5	P53951	403 aa		4.4	□□□□□ -1.7
RSC30	YHR056C	ATG40	Q99325	256 aa		4.4	□□□□□ -1.7
RSC30	YHR056C	PEX4	P29340	183 aa		4.4	□□□□□ -1.71
RSC30	YHR056C	OAC1	P32332	324 aa		4.4	□□□□□ -1.71
RSC30	YHR056C	PRM5	P40476	318 aa		4.4	□□□□□ -1.71
RSC30	YHR056C	YDR274C	P87283	123 aa		4.4	□□□□□ -1.71
RSC30	YHR056C	PST2	Q12335	198 aa	Known RBP	4.4	□□□□□ -1.71
RSC30	YHR056C	YLR358C	O13565	187 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	KIN28	P06242	306 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	ADK1	P07170	222 aa	Known RBP	4.39	□□□□□ -1.71
RSC30	YHR056C	COX9	P07255	59 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	ATF1	P40353	525 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	NOC4	Q06512	552 aa	Predicted RBP	4.39	□□□□□ -1.71
RSC30	YHR056C	FUR4	P05316	633 aa	Known RBP	4.39	□□□□□ -1.71
RSC30	YHR056C	YNL194C	P40169	301 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	MAM33	P40513	266 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	YDR239C	Q03780	787 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	LYS21	Q12122	440 aa	Known RBP	4.39	□□□□□ -1.71
RSC30	YHR056C	RAS1	P01119	309 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	MATALPHA1	P0CY06	175 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	HMLALPHA1	P0CY07	175 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	SRY1	P36007	326 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	THO1	P40040	218 aa	Known RBP	4.39	□□□□□ -1.71
RSC30	YHR056C	YGL204C	P53089	101 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	PEX30	Q06169	523 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	YLR173W	Q06247	608 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	MDM36	Q06820	579 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	YOR352W	Q08816	343 aa		4.39	□□□□□ -1.71
RSC30	YHR056C	MRS3	P10566	314 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	SNF4	P12904	322 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	PHB2	P50085	310 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	TDA6	Q06466	467 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	YOR186W	Q08560	144 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	DGK1	Q12382	290 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	EAF3	Q12432	401 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	ZRT3	P34240	503 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	RCN1	P36054	211 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	RMR1	P53060	241 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
RSC30	YHR056C	HSK3	P69852	69 aa		4.38	□□□□□ -1.71
RSC30	YHR056C	CKA1	P15790	372 aa		4.37	□□□□□ -1.71
RSC30	YHR056C	ERV1	P27882	189 aa		4.37	□□□□□ -1.71
RSC30	YHR056C	ARO4	P32449	370 aa	Known RBP	4.37	□□□□□ -1.71
RSC30	YHR056C	FLO10	P36170	1169 aa		4.37	□□□□□ -1.71
RSC30	YHR056C	NTC20	P38302	140 aa	Predicted RBP	4.37	□□□□□ -1.71
RSC30	YHR056C	SSH1	P38353	490 aa	Known RBP	4.37	□□□□□ -1.71
RSC30	YHR056C	SDP1	P40479	209 aa		4.37	□□□□□ -1.71
RSC30	YHR056C	HOT1	Q03213	719 aa		4.37	□□□□□ -1.71
RSC30	YHR056C	RRP17	Q04031	235 aa	Predicted RBP	4.37	□□□□□ -1.71
RSC30	YHR056C	PDC2	P32896	925 aa		4.37	□□□□□ -1.71
RSC30	YHR056C	POP6	P53218	158 aa		4.37	□□□□□ -1.71
RSC30	YHR056C	QRI7	P43122	407 aa		4.36	□□□□□ -1.71
RSC30	YHR056C	BUD17	P53727	317 aa		4.36	□□□□□ -1.71
RSC30	YHR056C	YOR378W	Q08902	515 aa		4.36	□□□□□ -1.71
RSC30	YHR056C	SWT1	Q12104	458 aa		4.36	□□□□□ -1.71
RSC30	YHR056C	ARO7	P32178	256 aa		4.36	□□□□□ -1.71
RSC30	YHR056C	NDC1	P32500	655 aa		4.36	□□□□□ -1.71
RSC30	YHR056C	BMT5	P40493	336 aa		4.36	□□□□□ -1.71
RSC30	YHR056C	RGC1	Q06108	1083 aa	Known RBP	4.36	□□□□□ -1.71
RSC30	YHR056C	ASA1	Q06822	443 aa		4.36	□□□□□ -1.71
RSC30	YHR056C	ATO3	Q12359	275 aa		4.36	□□□□□ -1.71
RSC30	YHR056C	FRE6	Q12473	712 aa		4.36	□□□□□ -1.71
RSC30	YHR056C	DIM1	P41819	318 aa	Known RBP	4.35	□□□□□ -1.71
RSC30	YHR056C	MID1	P41821	548 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	GNA1	P43577	159 aa	Predicted RBP	4.35	□□□□□ -1.71
RSC30	YHR056C	TOS8	P53147	276 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	YGR151C	P53287	111 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	SAY1	P53324	424 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	TLG1	Q03322	224 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	SPC24	Q04477	213 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	MSC3	Q05812	728 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	ALG6	Q12001	544 aa	Known RBP	4.35	□□□□□ -1.71
RSC30	YHR056C	YLR126C	Q12288	251 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	MTC2	P34246	357 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	SDS24	P38314	527 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	YJL163C	P46996	555 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	SKP1	P52286	194 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	YDR179W-A	Q03983	463 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	HOF1	Q05080	669 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	YPD1	Q07688	167 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	FCY1	Q12178	158 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	HUT1	Q12520	339 aa		4.35	□□□□□ -1.71
RSC30	YHR056C	YBR285W	P38354	144 aa		4.34	□□□□□ -1.71
RSC30	YHR056C	YHK8	P38776	514 aa		4.34	□□□□□ -1.71
RSC30	YHR056C	MRX1	P40050	688 aa		4.34	□□□□□ -1.71
RSC30	YHR056C	GPP2	P40106	250 aa	Known RBP	4.34	□□□□□ -1.71
RSC30	YHR056C	SCW4	P53334	386 aa	Known RBP	4.34	□□□□□ -1.71
RSC30	YHR056C	YMR226C	Q05016	267 aa	Known RBP	4.34	□□□□□ -1.71
RSC30	YHR056C	SNC2	P33328	115 aa		4.34	□□□□□ -1.72
RSC30	YHR056C	UTP30	P36144	274 aa	Known RBP	4.34	□□□□□ -1.72
RSC30	YHR056C	HNT2	P49775	206 aa		4.34	□□□□□ -1.72
RSC30	YHR056C	YNL234W	P53857	426 aa		4.34	□□□□□ -1.72
RSC30	YHR056C	PET122	P10355	254 aa		4.33	□□□□□ -1.72
RSC30	YHR056C	ALK2	P32789	676 aa	Predicted RBP	4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms