RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C COX5AP00424 153 aa2.79□□□□□ -1.96
MSM1YGR171C RPS28BP0C0X0 67 aaKnown RBP2.79□□□□□ -1.96
MSM1YGR171C GCY1P14065 312 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
MSM1YGR171C GCN3P14741 305 aa2.79□□□□□ -1.96
MSM1YGR171C MRPL28P36527 147 aa2.79□□□□□ -1.96
MSM1YGR171C SSH1P38353 490 aaKnown RBP2.79□□□□□ -1.96
MSM1YGR171C YER121WP40076 114 aa2.79□□□□□ -1.96
MSM1YGR171C SER33P40510 469 aa2.79□□□□□ -1.96
MSM1YGR171C YKE4P40544 346 aa2.79□□□□□ -1.96
MSM1YGR171C ILM1P47155 203 aa2.79□□□□□ -1.96
MSM1YGR171C OST3P48439 350 aa2.79□□□□□ -1.96
MSM1YGR171C BXI1P48558 297 aa2.79□□□□□ -1.96
MSM1YGR171C NRK1P53915 240 aa2.79□□□□□ -1.96
MSM1YGR171C ABF2Q02486 183 aa2.79□□□□□ -1.96
MSM1YGR171C DYN3Q04949 312 aa2.79□□□□□ -1.96
MSM1YGR171C SEI1Q06058 285 aa2.79□□□□□ -1.96
MSM1YGR171C YOL019WQ08157 551 aa2.79□□□□□ -1.96
MSM1YGR171C YOR292CQ08743 309 aa2.79□□□□□ -1.96
MSM1YGR171C MRX4Q12467 430 aa2.79□□□□□ -1.96
MSM1YGR171C RPS28AQ3E7X9 67 aaPredicted RBP2.79□□□□□ -1.96
MSM1YGR171C COX4P04037 155 aa2.79□□□□□ -1.96
MSM1YGR171C HIS3P06633 220 aa2.79□□□□□ -1.96
MSM1YGR171C DBF2P22204 572 aa2.79□□□□□ -1.96
MSM1YGR171C SPS18P32572 300 aa2.79□□□□□ -1.96
MSM1YGR171C YBR062CP38239 180 aa2.79□□□□□ -1.96
MSM1YGR171C YBR096WP38256 230 aa2.79□□□□□ -1.96
MSM1YGR171C GGC1P38988 300 aa2.79□□□□□ -1.96
MSM1YGR171C COG3P40094 801 aa2.79□□□□□ -1.96
MSM1YGR171C YGL204CP53089 101 aa2.79□□□□□ -1.96
MSM1YGR171C GOT1Q03554 138 aa2.79□□□□□ -1.96
MSM1YGR171C YDR248CQ03786 193 aa2.79□□□□□ -1.96
MSM1YGR171C PLP1Q04004 230 aa2.79□□□□□ -1.96
MSM1YGR171C YDR124WQ04608 324 aa2.79□□□□□ -1.96
MSM1YGR171C NOC4Q06512 552 aaPredicted RBP2.79□□□□□ -1.96
MSM1YGR171C YDL085C-AQ3E7B7 68 aaKnown RBP2.79□□□□□ -1.96
MSM1YGR171C IMP1P28627 190 aa2.78□□□□□ -1.96
MSM1YGR171C GPX1P36014 167 aa2.78□□□□□ -1.96
MSM1YGR171C YHI9P38765 294 aa2.78□□□□□ -1.96
MSM1YGR171C PDS1P40316 373 aaPredicted RBP2.78□□□□□ -1.96
MSM1YGR171C YGL235WP53071 178 aa2.78□□□□□ -1.96
MSM1YGR171C FMP48P53233 369 aa2.78□□□□□ -1.96
MSM1YGR171C NUP49Q02199 472 aa2.78□□□□□ -1.96
MSM1YGR171C MAK3Q03503 176 aa2.78□□□□□ -1.96
MSM1YGR171C SYC1Q08553 188 aaPredicted RBP2.78□□□□□ -1.96
MSM1YGR171C YPL278CQ08990 100 aa2.78□□□□□ -1.96
MSM1YGR171C YLR053CQ12026 108 aa2.78□□□□□ -1.96
MSM1YGR171C PET20Q99373 253 aa2.78□□□□□ -1.96
MSM1YGR171C TRX3P25372 127 aa2.77□□□□□ -1.97
MSM1YGR171C ECM33P38248 429 aaKnown RBP2.77□□□□□ -1.97
MSM1YGR171C DER1P38307 211 aa2.77□□□□□ -1.97
MSM1YGR171C UFE1P41834 346 aa2.77□□□□□ -1.97
MSM1YGR171C API2Q04413 109 aa2.77□□□□□ -1.97
MSM1YGR171C DAS2Q12084 232 aa2.77□□□□□ -1.97
MSM1YGR171C YLR050CQ12155 161 aaKnown RBP2.77□□□□□ -1.97
MSM1YGR171C TOP2P06786 1428 aaKnown RBP2.77□□□□□ -1.97
MSM1YGR171C EPT1P22140 391 aa2.76□□□□□ -1.97
MSM1YGR171C TAH1P25638 111 aaPredicted RBP2.76□□□□□ -1.97
MSM1YGR171C TCA17P32613 152 aa2.76□□□□□ -1.97
MSM1YGR171C CAT2P32796 670 aaKnown RBP2.76□□□□□ -1.97
MSM1YGR171C TIP20P33891 701 aa2.76□□□□□ -1.97
MSM1YGR171C SMP1P38128 452 aa2.76□□□□□ -1.97
MSM1YGR171C MBA1P38300 278 aa2.76□□□□□ -1.97
MSM1YGR171C YFL064CP43540 174 aa2.76□□□□□ -1.97
MSM1YGR171C YFH7P43591 353 aa2.76□□□□□ -1.97
MSM1YGR171C MRH4P53166 561 aa2.76□□□□□ -1.97
MSM1YGR171C AAH1P53909 347 aa2.76□□□□□ -1.97
MSM1YGR171C MRPS16Q02608 121 aa2.76□□□□□ -1.97
MSM1YGR171C SDC1Q03323 175 aa2.76□□□□□ -1.97
MSM1YGR171C INP1Q03694 420 aa2.76□□□□□ -1.97
MSM1YGR171C VHS1Q03785 461 aa2.76□□□□□ -1.97
MSM1YGR171C UTP15Q04305 513 aaKnown RBP2.76□□□□□ -1.97
MSM1YGR171C YLR030WQ07967 263 aa2.76□□□□□ -1.97
MSM1YGR171C AGC1Q12482 902 aa2.76□□□□□ -1.97
MSM1YGR171C PSK1P31374 1356 aa2.76□□□□□ -1.97
MSM1YGR171C CDC28P00546 298 aaKnown RBP2.76□□□□□ -1.97
MSM1YGR171C DPM1P14020 267 aaKnown RBP2.76□□□□□ -1.97
MSM1YGR171C NMT1P14743 455 aa2.76□□□□□ -1.97
MSM1YGR171C PHO80P20052 293 aa2.76□□□□□ -1.97
MSM1YGR171C YBR242WP38331 238 aa2.76□□□□□ -1.97
MSM1YGR171C PHO89P38361 574 aa2.76□□□□□ -1.97
MSM1YGR171C CYC2P38909 366 aa2.76□□□□□ -1.97
MSM1YGR171C COS4P43542 379 aa2.76□□□□□ -1.97
MSM1YGR171C YJR111CP47148 283 aaKnown RBP2.76□□□□□ -1.97
MSM1YGR171C PGU1P47180 361 aa2.76□□□□□ -1.97
MSM1YGR171C YGL262WP53054 175 aa2.76□□□□□ -1.97
MSM1YGR171C YGL034CP53186 121 aa2.76□□□□□ -1.97
MSM1YGR171C JAC1P53193 184 aa2.76□□□□□ -1.97
MSM1YGR171C COS6P53344 381 aa2.76□□□□□ -1.97
MSM1YGR171C HAL1Q01766 294 aa2.76□□□□□ -1.97
MSM1YGR171C DML1Q03652 475 aa2.76□□□□□ -1.97
MSM1YGR171C GRX8Q05926 109 aa2.76□□□□□ -1.97
MSM1YGR171C RFU1Q08003 200 aa2.76□□□□□ -1.97
MSM1YGR171C YOL024WQ08172 172 aa2.76□□□□□ -1.97
MSM1YGR171C YPL225WQ08971 146 aaKnown RBP2.76□□□□□ -1.97
MSM1YGR171C NSL1Q12143 216 aa2.76□□□□□ -1.97
MSM1YGR171C IGO2Q9P305 131 aa2.76□□□□□ -1.97
MSM1YGR171C SNT2P53127 1403 aa2.75□□□□□ -1.97
MSM1YGR171C RPL25P04456 142 aaKnown RBP2.75□□□□□ -1.97
MSM1YGR171C MET2P08465 486 aa2.75□□□□□ -1.97
MSM1YGR171C YOL163WP0CF20 169 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms