RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W STE7P06784 515 aa1.75□□□□□ -2.13
NIC96YFR002W YCR025CP25352 136 aa1.75□□□□□ -2.13
NIC96YFR002W PEX34P25584 144 aa1.75□□□□□ -2.13
NIC96YFR002W RFA3P26755 122 aaKnown RBP1.75□□□□□ -2.13
NIC96YFR002W AEP1P32493 518 aa1.75□□□□□ -2.13
NIC96YFR002W NTF2P33331 125 aaKnown RBP1.75□□□□□ -2.13
NIC96YFR002W JEN1P36035 616 aa1.75□□□□□ -2.13
NIC96YFR002W YKL075CP36083 450 aa1.75□□□□□ -2.13
NIC96YFR002W TVP38P36164 337 aa1.75□□□□□ -2.13
NIC96YFR002W MBA1P38300 278 aa1.75□□□□□ -2.13
NIC96YFR002W LSM12P38828 187 aaKnown RBP1.75□□□□□ -2.13
NIC96YFR002W YNR066CP53752 436 aa1.75□□□□□ -2.13
NIC96YFR002W IGO1P53897 168 aa1.75□□□□□ -2.13
NIC96YFR002W YMR010WQ03687 405 aa1.75□□□□□ -2.13
NIC96YFR002W YMR114CQ04471 368 aaKnown RBP1.75□□□□□ -2.13
NIC96YFR002W FSH2Q05015 223 aa1.75□□□□□ -2.13
NIC96YFR002W YMR226CQ05016 267 aaKnown RBP1.75□□□□□ -2.13
NIC96YFR002W GAS2Q06135 555 aa1.75□□□□□ -2.13
NIC96YFR002W SEC10Q06245 871 aa1.75□□□□□ -2.13
NIC96YFR002W RPN8Q08723 338 aaKnown RBP1.75□□□□□ -2.13
NIC96YFR002W GRE1Q08969 168 aa1.75□□□□□ -2.13
NIC96YFR002W SRO7Q12038 1033 aa1.75□□□□□ -2.13
NIC96YFR002W YAL064W-BO13512 126 aa1.75□□□□□ -2.13
NIC96YFR002W HTB1P02293 131 aaKnown RBP1.75□□□□□ -2.13
NIC96YFR002W HTB2P02294 131 aa1.75□□□□□ -2.13
NIC96YFR002W SPS19P32573 292 aaKnown RBP1.75□□□□□ -2.13
NIC96YFR002W YJR054WP47114 497 aa1.75□□□□□ -2.13
NIC96YFR002W DIA1P54005 336 aa1.75□□□□□ -2.13
NIC96YFR002W PRP38Q00723 242 aaPredicted RBP1.75□□□□□ -2.13
NIC96YFR002W YML018CQ03730 393 aa1.75□□□□□ -2.13
NIC96YFR002W CDD1Q06549 142 aa1.75□□□□□ -2.13
NIC96YFR002W DTD1Q07648 150 aaKnown RBP1.75□□□□□ -2.13
NIC96YFR002W COQ10Q08058 207 aa1.75□□□□□ -2.13
NIC96YFR002W PLB3Q08108 686 aa1.75□□□□□ -2.13
NIC96YFR002W TIR4Q12218 487 aaPredicted RBP1.75□□□□□ -2.13
NIC96YFR002W YIL046W-AQ3E7Z4 54 aa1.75□□□□□ -2.13
NIC96YFR002W QCR7P00128 127 aa1.74□□□□□ -2.13
NIC96YFR002W IFM1P25038 676 aa1.74□□□□□ -2.13
NIC96YFR002W URA10P30402 227 aa1.74□□□□□ -2.13
NIC96YFR002W LDS1P31379 325 aa1.74□□□□□ -2.13
NIC96YFR002W PRX1P34227 261 aaKnown RBP1.74□□□□□ -2.13
NIC96YFR002W GOS1P38736 223 aa1.74□□□□□ -2.13
NIC96YFR002W MGA1P53050 456 aa1.74□□□□□ -2.13
NIC96YFR002W ALG13P53178 202 aa1.74□□□□□ -2.13
NIC96YFR002W SDC1Q03323 175 aa1.74□□□□□ -2.13
NIC96YFR002W VPS60Q03390 229 aa1.74□□□□□ -2.13
NIC96YFR002W GIM5Q04493 163 aa1.74□□□□□ -2.13
NIC96YFR002W FUS2Q05670 677 aa1.74□□□□□ -2.13
NIC96YFR002W YOR292CQ08743 309 aa1.74□□□□□ -2.13
NIC96YFR002W YPL119C-AQ3E751 87 aa1.74□□□□□ -2.13
NIC96YFR002W FMP27Q06179 2628 aa1.74□□□□□ -2.13
NIC96YFR002W RPL35AP0CX84 120 aaKnown RBP1.74□□□□□ -2.13
NIC96YFR002W RPL35BP0CX85 120 aaKnown RBP1.74□□□□□ -2.13
NIC96YFR002W KSS1P14681 368 aa1.74□□□□□ -2.13
NIC96YFR002W CDC10P25342 322 aaKnown RBP1.74□□□□□ -2.13
NIC96YFR002W SRX1P36077 127 aa1.74□□□□□ -2.13
NIC96YFR002W SHE1P38200 338 aa1.74□□□□□ -2.13
NIC96YFR002W IKI1P38874 309 aa1.74□□□□□ -2.13
NIC96YFR002W COX15P40086 486 aa1.74□□□□□ -2.13
NIC96YFR002W ADO1P47143 340 aaKnown RBP1.74□□□□□ -2.13
NIC96YFR002W SDS23P53172 527 aa1.74□□□□□ -2.13
NIC96YFR002W YGR015CP53208 328 aa1.74□□□□□ -2.13
NIC96YFR002W UTP15Q04305 513 aaKnown RBP1.74□□□□□ -2.13
NIC96YFR002W TAF9Q05027 157 aa1.74□□□□□ -2.13
NIC96YFR002W ARC18Q05933 178 aaKnown RBP1.74□□□□□ -2.13
NIC96YFR002W YPR098CQ06089 161 aa1.74□□□□□ -2.13
NIC96YFR002W YPL245WQ12179 454 aaKnown RBP1.74□□□□□ -2.13
NIC96YFR002W HMS1Q12398 434 aa1.74□□□□□ -2.13
NIC96YFR002W AI5_BETAQ9ZZX0 354 aa1.74□□□□□ -2.13
NIC96YFR002W SEC16P48415 2195 aaKnown RBP1.73□□□□□ -2.13
NIC96YFR002W RPL27AP0C2H6 136 aaKnown RBP1.73□□□□□ -2.13
NIC96YFR002W RPL27BP0C2H7 136 aaKnown RBP1.73□□□□□ -2.13
NIC96YFR002W ATP7P30902 174 aa1.73□□□□□ -2.13
NIC96YFR002W FMT1P32785 401 aa1.73□□□□□ -2.13
NIC96YFR002W FRM2P37261 193 aa1.73□□□□□ -2.13
NIC96YFR002W SOL2P37262 315 aa1.73□□□□□ -2.13
NIC96YFR002W HEK2P38199 381 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
NIC96YFR002W MED8P38304 223 aa1.73□□□□□ -2.13
NIC96YFR002W YHB1P39676 399 aaKnown RBP1.73□□□□□ -2.13
NIC96YFR002W MIC26P50087 233 aa1.73□□□□□ -2.13
NIC96YFR002W NRM1P53718 249 aa1.73□□□□□ -2.13
NIC96YFR002W FAR8Q05040 523 aa1.73□□□□□ -2.13
NIC96YFR002W YLR177WQ06251 628 aa1.73□□□□□ -2.13
NIC96YFR002W DCN1Q12395 269 aa1.73□□□□□ -2.13
NIC96YFR002W TFC7Q12415 435 aa1.73□□□□□ -2.13
NIC96YFR002W CMC2Q3E7A4 109 aa1.73□□□□□ -2.13
NIC96YFR002W YOL085CQ99345 113 aa1.73□□□□□ -2.13
NIC96YFR002W PHO80P20052 293 aa1.73□□□□□ -2.13
NIC96YFR002W IDH1P28834 360 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
NIC96YFR002W ALK2P32789 676 aaPredicted RBP1.73□□□□□ -2.13
NIC96YFR002W EGD2P38879 174 aaKnown RBP1.73□□□□□ -2.13
NIC96YFR002W YJR149WP47177 404 aa1.73□□□□□ -2.13
NIC96YFR002W TRM9P49957 279 aa1.73□□□□□ -2.13
NIC96YFR002W GET1P53192 235 aa1.73□□□□□ -2.13
NIC96YFR002W EFM5P53200 248 aaKnown RBP1.73□□□□□ -2.13
NIC96YFR002W YGR067CP53243 804 aa1.73□□□□□ -2.13
NIC96YFR002W MMT2Q08970 484 aa1.73□□□□□ -2.13
NIC96YFR002W YLR126CQ12288 251 aa1.73□□□□□ -2.13
NIC96YFR002W YPL229WQ99395 206 aa1.73□□□□□ -2.13
NIC96YFR002W TPS2P31688 896 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms