RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C AKR2Q12013 749 aa1.18□□□□□ -2.22
SMB1YER029C ATG31Q12421 196 aa1.18□□□□□ -2.22
SMB1YER029C YHR127WP38833 243 aaKnown RBP1.17□□□□□ -2.22
SMB1YER029C YER189WP40104 122 aa1.17□□□□□ -2.22
SMB1YER029C YGL159WP53110 370 aa1.17□□□□□ -2.22
SMB1YER029C MRPS8Q03799 155 aa1.17□□□□□ -2.22
SMB1YER029C PAM18Q07914 168 aa1.17□□□□□ -2.22
SMB1YER029C YOR186WQ08560 144 aa1.17□□□□□ -2.22
SMB1YER029C SNU23Q12368 194 aaPredicted RBP1.17□□□□□ -2.22
SMB1YER029C UBR2Q07963 1872 aa1.17□□□□□ -2.22
SMB1YER029C SIR4P11978 1358 aa1.17□□□□□ -2.22
SMB1YER029C CFT1Q06632 1357 aaKnown RBP1.17□□□□□ -2.22
SMB1YER029C YLR462WO13556 202 aa1.16□□□□□ -2.22
SMB1YER029C ERG24P32462 438 aaKnown RBP1.16□□□□□ -2.22
SMB1YER029C YEL075CP39972 122 aa1.16□□□□□ -2.22
SMB1YER029C PEP8P40335 379 aa1.16□□□□□ -2.22
SMB1YER029C HOC1P47124 396 aa1.16□□□□□ -2.22
SMB1YER029C YNL046WP53956 172 aa1.16□□□□□ -2.22
SMB1YER029C RRN5Q02983 363 aa1.16□□□□□ -2.22
SMB1YER029C YMR279CQ03263 540 aa1.16□□□□□ -2.22
SMB1YER029C MSA1Q08471 629 aa1.16□□□□□ -2.22
SMB1YER029C YLR126CQ12288 251 aa1.16□□□□□ -2.22
SMB1YER029C MED4Q12343 284 aa1.16□□□□□ -2.22
SMB1YER029C IPP1P00817 287 aaKnown RBP1.15□□□□□ -2.23
SMB1YER029C DDI2P0CH63 225 aa1.15□□□□□ -2.23
SMB1YER029C DDI3P0CH64 225 aa1.15□□□□□ -2.23
SMB1YER029C DSF1P0CX08 502 aa1.15□□□□□ -2.23
SMB1YER029C YNR073CP0CX09 502 aa1.15□□□□□ -2.23
SMB1YER029C FBA1P14540 359 aaKnown RBP1.15□□□□□ -2.23
SMB1YER029C LDB7P38210 180 aa1.15□□□□□ -2.23
SMB1YER029C MRPL50P53724 139 aa1.15□□□□□ -2.23
SMB1YER029C PET117Q02771 107 aa1.15□□□□□ -2.23
SMB1YER029C FAR8Q05040 523 aa1.15□□□□□ -2.23
SMB1YER029C INM2Q05533 292 aa1.15□□□□□ -2.23
SMB1YER029C SEI1Q06058 285 aa1.15□□□□□ -2.23
SMB1YER029C YPR172WQ06608 200 aa1.15□□□□□ -2.23
SMB1YER029C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
SMB1YER029C YPL229WQ99395 206 aa1.15□□□□□ -2.23
SMB1YER029C GRX2P17695 143 aaKnown RBP1.14□□□□□ -2.23
SMB1YER029C RPS5P26783 225 aaKnown RBP1.14□□□□□ -2.23
SMB1YER029C MDH3P32419 343 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
SMB1YER029C MSN4P33749 630 aa1.14□□□□□ -2.23
SMB1YER029C YKL075CP36083 450 aa1.14□□□□□ -2.23
SMB1YER029C YMR144WP40214 342 aaKnown RBP1.14□□□□□ -2.23
SMB1YER029C YGR026WP53217 278 aa1.14□□□□□ -2.23
SMB1YER029C GTR2P53290 341 aa1.14□□□□□ -2.23
SMB1YER029C SRL4Q03085 281 aa1.14□□□□□ -2.23
SMB1YER029C PRM15Q03262 622 aa1.14□□□□□ -2.23
SMB1YER029C YIL177CP40434 1758 aa1.13□□□□□ -2.23
SMB1YER029C YJL225CP40889 1758 aa1.13□□□□□ -2.23
SMB1YER029C MATALPHA1P0CY06 175 aa1.13□□□□□ -2.23
SMB1YER029C HMLALPHA1P0CY07 175 aa1.13□□□□□ -2.23
SMB1YER029C ERD2P18414 219 aa1.13□□□□□ -2.23
SMB1YER029C YPT52P36018 234 aaKnown RBP1.13□□□□□ -2.23
SMB1YER029C PHO88P38264 188 aaPredicted RBP1.13□□□□□ -2.23
SMB1YER029C YHR180WP38868 163 aa1.13□□□□□ -2.23
SMB1YER029C FMC1P40491 155 aa1.13□□□□□ -2.23
SMB1YER029C BMT5P40493 336 aa1.13□□□□□ -2.23
SMB1YER029C CAT5P41735 233 aa1.13□□□□□ -2.23
SMB1YER029C RPA43P46669 326 aa1.13□□□□□ -2.23
SMB1YER029C CYT2Q00873 224 aa1.13□□□□□ -2.23
SMB1YER029C ATG39Q06159 398 aa1.13□□□□□ -2.23
SMB1YER029C YPL257WQ08974 193 aa1.13□□□□□ -2.23
SMB1YER029C ATO3Q12359 275 aa1.13□□□□□ -2.23
SMB1YER029C YHR139C-AO13536 103 aa1.12□□□□□ -2.23
SMB1YER029C YCR016WP25617 290 aaKnown RBP1.12□□□□□ -2.23
SMB1YER029C VMA11P32842 164 aa1.12□□□□□ -2.23
SMB1YER029C GLE2P40066 365 aa1.12□□□□□ -2.23
SMB1YER029C FIS1P40515 155 aa1.12□□□□□ -2.23
SMB1YER029C CIS3P47001 227 aa1.12□□□□□ -2.23
SMB1YER029C TRM9P49957 279 aa1.12□□□□□ -2.23
SMB1YER029C RMR1P53060 241 aa1.12□□□□□ -2.23
SMB1YER029C KRE28Q04431 385 aa1.12□□□□□ -2.23
SMB1YER029C NEJ1Q06148 342 aa1.12□□□□□ -2.23
SMB1YER029C NIP7Q08962 181 aaKnown RBP1.12□□□□□ -2.23
SMB1YER029C HTL1Q9URQ5 78 aa1.12□□□□□ -2.23
SMB1YER029C SNA3P14359 133 aa1.11□□□□□ -2.23
SMB1YER029C FCY2P17064 533 aa1.11□□□□□ -2.23
SMB1YER029C RPO26P20435 155 aa1.11□□□□□ -2.23
SMB1YER029C MRPL25P23369 157 aa1.11□□□□□ -2.23
SMB1YER029C CDC10P25342 322 aaKnown RBP1.11□□□□□ -2.23
SMB1YER029C SRB4P32569 687 aa1.11□□□□□ -2.23
SMB1YER029C YHR022CP38763 256 aa1.11□□□□□ -2.23
SMB1YER029C YAR068WP39564 161 aa1.11□□□□□ -2.23
SMB1YER029C ARR2Q06597 130 aa1.11□□□□□ -2.23
SMB1YER029C MSW1P04803 379 aa1.1□□□□□ -2.23
SMB1YER029C RPL9AP05738 191 aaKnown RBP1.1□□□□□ -2.23
SMB1YER029C MDH2P22133 377 aa1.1□□□□□ -2.23
SMB1YER029C OAC1P32332 324 aa1.1□□□□□ -2.23
SMB1YER029C RIB1P38066 345 aa1.1□□□□□ -2.23
SMB1YER029C CUE1P38428 203 aa1.1□□□□□ -2.23
SMB1YER029C RPF1P38805 295 aaKnown RBP1.1□□□□□ -2.23
SMB1YER029C PEX17P40155 199 aa1.1□□□□□ -2.23
SMB1YER029C YIL001WP40560 513 aa1.1□□□□□ -2.23
SMB1YER029C HAM1P47119 197 aaKnown RBP1.1□□□□□ -2.23
SMB1YER029C ILM1P47155 203 aa1.1□□□□□ -2.23
SMB1YER029C YJR149WP47177 404 aa1.1□□□□□ -2.23
SMB1YER029C RPL9BP51401 191 aaKnown RBP1.1□□□□□ -2.23
SMB1YER029C NSA1P53136 463 aaPredicted RBP1.1□□□□□ -2.23
SMB1YER029C TOS8P53147 276 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms