RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C YGP1P38616 354 aaKnown RBP9.29□□□□□ -0.92
SPC25YER018C SKP1P52286 194 aa9.29□□□□□ -0.92
SPC25YER018C LAP3Q01532 483 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
SPC25YER018C YDR248CQ03786 193 aa9.29□□□□□ -0.92
SPC25YER018C SPS4P09937 338 aa9.28□□□□□ -0.92
SPC25YER018C RPL43AP0CX25 92 aaKnown RBP9.28□□□□□ -0.92
SPC25YER018C RPL43BP0CX26 92 aa9.28□□□□□ -0.92
SPC25YER018C HNM1P19807 563 aa9.28□□□□□ -0.92
SPC25YER018C RFA1P22336 621 aaKnown RBP9.28□□□□□ -0.92
SPC25YER018C MRPL36P36531 177 aa9.28□□□□□ -0.92
SPC25YER018C FIG1P38224 298 aa9.28□□□□□ -0.92
SPC25YER018C MID1P41821 548 aa9.28□□□□□ -0.92
SPC25YER018C GPG1P53130 126 aa9.28□□□□□ -0.92
SPC25YER018C SKO1Q02100 647 aa9.28□□□□□ -0.92
SPC25YER018C YML018CQ03730 393 aa9.28□□□□□ -0.92
SPC25YER018C PIN3Q06449 215 aa9.28□□□□□ -0.92
SPC25YER018C YOR186WQ08560 144 aa9.28□□□□□ -0.92
SPC25YER018C RPL6BP05739 176 aaKnown RBP9.27□□□□□ -0.93
SPC25YER018C RPS31P05759 152 aaKnown RBP9.27□□□□□ -0.93
SPC25YER018C SAR1P20606 190 aaKnown RBP9.27□□□□□ -0.93
SPC25YER018C ACH1P32316 526 aa9.27□□□□□ -0.93
SPC25YER018C BOL3P39724 118 aa9.27□□□□□ -0.93
SPC25YER018C EGT2P42835 1041 aa9.27□□□□□ -0.93
SPC25YER018C YLR125WQ12138 136 aa9.27□□□□□ -0.93
SPC25YER018C TRA1P38811 3744 aa9.27□□□□□ -0.93
SPC25YER018C YLL053CP0CD98 152 aa9.26□□□□□ -0.93
SPC25YER018C RPS23AP0CX29 145 aaKnown RBP9.26□□□□□ -0.93
SPC25YER018C RPS23BP0CX30 145 aa9.26□□□□□ -0.93
SPC25YER018C PET122P10355 254 aa9.26□□□□□ -0.93
SPC25YER018C NHP6BP11633 99 aaKnown RBP9.26□□□□□ -0.93
SPC25YER018C GRX2P17695 143 aaKnown RBP9.26□□□□□ -0.93
SPC25YER018C DIT1P21623 536 aa9.26□□□□□ -0.93
SPC25YER018C ERG3P32353 365 aa9.26□□□□□ -0.93
SPC25YER018C MRPL27P36526 146 aaPredicted RBP9.26□□□□□ -0.93
SPC25YER018C MRPS16Q02608 121 aa9.26□□□□□ -0.93
SPC25YER018C YOR385WQ08909 290 aa9.26□□□□□ -0.93
SPC25YER018C AAC1P04710 309 aa9.25□□□□□ -0.93
SPC25YER018C IFM1P25038 676 aa9.25□□□□□ -0.93
SPC25YER018C AGA2P32781 87 aa9.25□□□□□ -0.93
SPC25YER018C PAN3P36102 679 aaPredicted RBP9.25□□□□□ -0.93
SPC25YER018C YCK3P39962 524 aa9.25□□□□□ -0.93
SPC25YER018C YJR011CP47086 261 aaPredicted RBP9.25□□□□□ -0.93
SPC25YER018C ALG9P53868 555 aaKnown RBP9.25□□□□□ -0.93
SPC25YER018C PRM15Q03262 622 aa9.25□□□□□ -0.93
SPC25YER018C NGL2Q03264 515 aaKnown RBP9.25□□□□□ -0.93
SPC25YER018C VBA1Q04301 562 aa9.25□□□□□ -0.93
SPC25YER018C GAT3Q07928 141 aa9.25□□□□□ -0.93
SPC25YER018C PET20Q99373 253 aa9.25□□□□□ -0.93
SPC25YER018C YCR101CP25607 182 aa9.24□□□□□ -0.93
SPC25YER018C PEX4P29340 183 aa9.24□□□□□ -0.93
SPC25YER018C FMT1P32785 401 aa9.24□□□□□ -0.93
SPC25YER018C PPQ1P32945 549 aa9.24□□□□□ -0.93
SPC25YER018C MTR2P34232 184 aaKnown RBP9.24□□□□□ -0.93
SPC25YER018C YKL107WP34251 309 aa9.24□□□□□ -0.93
SPC25YER018C LSM1P47017 172 aaKnown RBP9.24□□□□□ -0.93
SPC25YER018C GWT1P47026 490 aa9.24□□□□□ -0.93
SPC25YER018C TAF4P50105 388 aa9.24□□□□□ -0.93
SPC25YER018C GTF1P53260 183 aaPredicted RBP9.24□□□□□ -0.93
SPC25YER018C SED1Q01589 338 aa9.24□□□□□ -0.93
SPC25YER018C YMR279CQ03263 540 aa9.24□□□□□ -0.93
SPC25YER018C YMR254CQ04838 102 aa9.24□□□□□ -0.93
SPC25YER018C FCY22Q12119 530 aa9.24□□□□□ -0.93
SPC25YER018C IMP1P28627 190 aa9.23□□□□□ -0.93
SPC25YER018C SPC29P33419 253 aa9.23□□□□□ -0.93
SPC25YER018C YTH1Q06102 208 aaPredicted RBP9.23□□□□□ -0.93
SPC25YER018C TRM13Q12383 476 aa9.23□□□□□ -0.93
SPC25YER018C MPD1Q12404 318 aaKnown RBP9.23□□□□□ -0.93
SPC25YER018C DAL80P26343 269 aa9.22□□□□□ -0.93
SPC25YER018C PRS2P38620 318 aaKnown RBP9.22□□□□□ -0.93
SPC25YER018C ECM14P38836 430 aa9.22□□□□□ -0.93
SPC25YER018C YER121WP40076 114 aa9.22□□□□□ -0.93
SPC25YER018C QRI1P43123 477 aaKnown RBP9.22□□□□□ -0.93
SPC25YER018C RPS0BP46654 252 aaKnown RBP9.22□□□□□ -0.93
SPC25YER018C MRX5P47007 382 aa9.22□□□□□ -0.93
SPC25YER018C OKP1P53298 406 aa9.22□□□□□ -0.93
SPC25YER018C GRC3Q07845 632 aa9.22□□□□□ -0.93
SPC25YER018C YLR108CQ12259 485 aa9.22□□□□□ -0.93
SPC25YER018C ATG40Q99325 256 aa9.22□□□□□ -0.93
SPC25YER018C URA3P03962 267 aa9.21□□□□□ -0.94
SPC25YER018C YML003WP0CF16 290 aa9.21□□□□□ -0.94
SPC25YER018C CPR4P25334 318 aa9.21□□□□□ -0.94
SPC25YER018C MRP17P28778 131 aa9.21□□□□□ -0.94
SPC25YER018C SRL3P36167 246 aa9.21□□□□□ -0.94
SPC25YER018C EDS1P38073 919 aa9.21□□□□□ -0.94
SPC25YER018C YBR197CP38306 217 aa9.21□□□□□ -0.94
SPC25YER018C LNP1P38878 278 aa9.21□□□□□ -0.94
SPC25YER018C YPL067CQ02754 198 aa9.21□□□□□ -0.94
SPC25YER018C YDR114CQ04597 100 aa9.21□□□□□ -0.94
SPC25YER018C SYM1Q06563 197 aa9.21□□□□□ -0.94
SPC25YER018C UBA3Q99344 299 aa9.21□□□□□ -0.94
SPC25YER018C RPL39P04650 51 aa9.2□□□□□ -0.94
SPC25YER018C OCH1P31755 480 aa9.2□□□□□ -0.94
SPC25YER018C YKL187CP34231 750 aa9.2□□□□□ -0.94
SPC25YER018C SHM2P37291 469 aaKnown RBP9.2□□□□□ -0.94
SPC25YER018C SWD3P38123 315 aa9.2□□□□□ -0.94
SPC25YER018C POP8P38208 133 aa9.2□□□□□ -0.94
SPC25YER018C COS8P38723 381 aa9.2□□□□□ -0.94
SPC25YER018C CCS1P40202 249 aaKnown RBP9.2□□□□□ -0.94
SPC25YER018C HNT2P49775 206 aa9.2□□□□□ -0.94
SPC25YER018C SLX9P53251 210 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms