RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC2	YDR180W	HXT11	P54862	567 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	TRM44	Q02648	567 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	RSM10	Q03201	203 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YDR132C	Q03900	495 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	ECM18	Q04623	453 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YMR034C	Q05131	434 aa	Predicted RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	CTS2	Q06350	511 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	CUR1	Q06469	252 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YPD1	Q07688	167 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	THP1	Q08231	455 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	REX4	Q08237	289 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	TMS1	Q12116	473 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	DFM1	Q12743	341 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	KIN28	P06242	306 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	SPT15	P13393	240 aa	Known RBP	0.9	□□□□□ -2.26
SCC2	YDR180W	RNA15	P25299	296 aa	Predicted RBP	0.9	□□□□□ -2.26
SCC2	YDR180W	ECM25	P32525	599 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	ASC1	P38011	319 aa	Known RBP	0.9	□□□□□ -2.26
SCC2	YDR180W	MRPS9	P38120	278 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	VBA2	P38358	474 aa	Known RBP	0.9	□□□□□ -2.26
SCC2	YDR180W	INM1	P38710	295 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	YHR035W	P38769	630 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	MBB1	P39534	108 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	MEP2	P41948	499 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	ATG27	P46989	271 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	LSM1	P47017	172 aa	Known RBP	0.9	□□□□□ -2.26
SCC2	YDR180W	AIF1	P52923	378 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	SDT1	P53078	280 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	YGL039W	P53183	348 aa	Known RBP	0.9	□□□□□ -2.26
SCC2	YDR180W	TIM21	P53220	239 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	NRK1	P53915	240 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	DIA1	P54005	336 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	SKO1	Q02100	647 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	NUP116	Q02630	1113 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	NEJ1	Q06148	342 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	TGS1	Q12052	315 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	ERP3	Q12403	225 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	NCB2	Q92317	146 aa		0.9	□□□□□ -2.26
SCC2	YDR180W	OPI3	P05375	206 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	ERG4	P25340	473 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	YCR006C	P25350	157 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	DCC1	P25559	380 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	RPS5	P26783	225 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	ERG24	P32462	438 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	YKL097C	P34245	136 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	SOR1	P35497	357 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	RMD6	P39975	231 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	YMR144W	P40214	342 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	YFL015C	P43578	164 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	ARP3	P47117	449 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	PRM8	P53174	237 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	RPN14	P53196	417 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	NQM1	P53228	333 aa	Predicted RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	YGR126W	P53274	230 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	SLD5	Q03406	294 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	MAK3	Q03503	176 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	SOR2	Q07786	357 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	YOR365C	Q08844	703 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	FEX2	Q08991	375 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	RBD2	Q12270	262 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	GEP5	Q12393	293 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	SPO24	Q3E752	67 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	YDR246W-A	Q3E763	66 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	YMR175W-A	Q3E766	64 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	YCR075W-A	Q3E830	75 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	COX2	P00410	251 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	CDC7	P06243	507 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	TRP4	P07285	380 aa	Predicted RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	RPS28B	P0C0X0	67 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	SAR1	P20606	190 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	GPI12	P23797	304 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	LSB5	P25369	354 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	AHC2	P25649	128 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	FMP46	P36141	133 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	URA8	P38627	578 aa	Predicted RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	CHL4	P38907	458 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	YER076C	P40049	302 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	YIL012W	P40551	113 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	RPS10B	P46784	105 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	SCS3	P53012	380 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	YGL114W	P53134	725 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	YGR015C	P53208	328 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	RTT102	P53330	157 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	RRN9	P53437	365 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	MPP6	P53725	186 aa	Predicted RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	ALG9	P53868	555 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	EGD1	Q02642	157 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	MSC1	Q03104	513 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	CWC21	Q03375	135 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	SUE1	Q06524	206 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	CSM4	Q08955	156 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	PER33	Q12144	273 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	RRP42	Q12277	265 aa	Predicted RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	MTR10	Q99189	972 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	Q0144	Q9ZZW2	109 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	MDN1	Q12019	4910 aa	Known RBP	0.9	□□□□□ -2.27
SCC2	YDR180W	FLO9	P39712	1322 aa		0.9	□□□□□ -2.27
SCC2	YDR180W	MSW1	P04803	379 aa		0.89	□□□□□ -2.27
SCC2	YDR180W	SIR2	P06700	562 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms