RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W POP5P28005 173 aa1.74□□□□□ -2.13
UBP1YDL122W COS9P36034 407 aa1.74□□□□□ -2.13
UBP1YDL122W IST2P38250 946 aa1.74□□□□□ -2.13
UBP1YDL122W EFM1P38732 585 aa1.74□□□□□ -2.13
UBP1YDL122W GEP4P38812 185 aa1.74□□□□□ -2.13
UBP1YDL122W ATG7P38862 630 aa1.74□□□□□ -2.13
UBP1YDL122W CCT4P39078 528 aaKnown RBP1.74□□□□□ -2.13
UBP1YDL122W YER084WP40057 128 aa1.74□□□□□ -2.13
UBP1YDL122W SIM1P40472 476 aa1.74□□□□□ -2.13
UBP1YDL122W OTU1P43558 301 aa1.74□□□□□ -2.13
UBP1YDL122W AIM24P47127 394 aa1.74□□□□□ -2.13
UBP1YDL122W BOL2P53082 120 aa1.74□□□□□ -2.13
UBP1YDL122W POP6P53218 158 aa1.74□□□□□ -2.13
UBP1YDL122W LST7P53237 242 aa1.74□□□□□ -2.13
UBP1YDL122W TPC1P53257 314 aa1.74□□□□□ -2.13
UBP1YDL122W PXR1P53335 271 aaPredicted RBP1.74□□□□□ -2.13
UBP1YDL122W YDR415CQ04033 374 aaPredicted RBP1.74□□□□□ -2.13
UBP1YDL122W SSQ1Q05931 657 aaPredicted RBP1.74□□□□□ -2.13
UBP1YDL122W BER1Q06688 274 aaKnown RBP1.74□□□□□ -2.13
UBP1YDL122W YEH2Q07950 538 aa1.74□□□□□ -2.13
UBP1YDL122W FAR1P21268 830 aa1.74□□□□□ -2.13
UBP1YDL122W GLC7P32598 312 aaKnown RBP1.74□□□□□ -2.13
UBP1YDL122W SWD2P36104 329 aaPredicted RBP1.74□□□□□ -2.13
UBP1YDL122W MST28P39552 234 aa1.74□□□□□ -2.13
UBP1YDL122W YIL024CP40543 189 aa1.74□□□□□ -2.13
UBP1YDL122W CAB4P53332 305 aa1.74□□□□□ -2.13
UBP1YDL122W BIO4P53630 237 aa1.74□□□□□ -2.13
UBP1YDL122W HXT11P54862 567 aa1.74□□□□□ -2.13
UBP1YDL122W PBP4Q07362 185 aaKnown RBP1.74□□□□□ -2.13
UBP1YDL122W THP3Q12049 470 aaKnown RBP1.74□□□□□ -2.13
UBP1YDL122W YOR214CQ12282 236 aa1.74□□□□□ -2.13
UBP1YDL122W ATG31Q12421 196 aa1.74□□□□□ -2.13
UBP1YDL122W YCL012CQ8J0M4 134 aa1.74□□□□□ -2.13
UBP1YDL122W CAP2P13517 287 aa1.73□□□□□ -2.13
UBP1YDL122W MCK1P21965 375 aaKnown RBP1.73□□□□□ -2.13
UBP1YDL122W EXG1P23776 448 aaKnown RBP1.73□□□□□ -2.13
UBP1YDL122W UTR5P32630 166 aa1.73□□□□□ -2.13
UBP1YDL122W SIP2P34164 415 aaKnown RBP1.73□□□□□ -2.13
UBP1YDL122W KEG1P43614 200 aa1.73□□□□□ -2.13
UBP1YDL122W YAR1P46683 200 aa1.73□□□□□ -2.13
UBP1YDL122W SFH5P47008 294 aa1.73□□□□□ -2.13
UBP1YDL122W OKP1P53298 406 aa1.73□□□□□ -2.13
UBP1YDL122W ACT1P60010 375 aaKnown RBP1.73□□□□□ -2.13
UBP1YDL122W MDM36Q06820 579 aa1.73□□□□□ -2.13
UBP1YDL122W SLD7Q08457 257 aa1.73□□□□□ -2.13
UBP1YDL122W OSW1Q08692 278 aa1.73□□□□□ -2.13
UBP1YDL122W YPL199CQ08954 240 aa1.73□□□□□ -2.13
UBP1YDL122W CRC1Q12289 327 aa1.73□□□□□ -2.13
UBP1YDL122W ADH2P00331 348 aaKnown RBP1.72□□□□□ -2.13
UBP1YDL122W RPL42AP0CX27 106 aaKnown RBP1.72□□□□□ -2.13
UBP1YDL122W RPL42BP0CX28 106 aaKnown RBP1.72□□□□□ -2.13
UBP1YDL122W TIR2P33890 251 aa1.72□□□□□ -2.13
UBP1YDL122W GPX2P38143 162 aa1.72□□□□□ -2.13
UBP1YDL122W YHK8P38776 514 aa1.72□□□□□ -2.13
UBP1YDL122W AGP3P43548 558 aa1.72□□□□□ -2.13
UBP1YDL122W MRPL50P53724 139 aa1.72□□□□□ -2.13
UBP1YDL122W WSC2P53832 503 aa1.72□□□□□ -2.13
UBP1YDL122W YPL080CQ02826 108 aa1.72□□□□□ -2.13
UBP1YDL122W MRPS17Q03246 237 aaPredicted RBP1.72□□□□□ -2.13
UBP1YDL122W YMR209CQ03648 457 aa1.72□□□□□ -2.13
UBP1YDL122W SNX41Q04053 625 aa1.72□□□□□ -2.13
UBP1YDL122W RTT103Q05543 409 aa1.72□□□□□ -2.13
UBP1YDL122W PAM18Q07914 168 aa1.72□□□□□ -2.13
UBP1YDL122W ATX2Q12067 313 aa1.72□□□□□ -2.13
UBP1YDL122W YPL245WQ12179 454 aaKnown RBP1.72□□□□□ -2.13
UBP1YDL122W YOR029WQ12243 111 aa1.72□□□□□ -2.13
UBP1YDL122W TDH2P00358 332 aaKnown RBP1.72□□□□□ -2.13
UBP1YDL122W MRP1P10662 321 aaKnown RBP1.72□□□□□ -2.13
UBP1YDL122W TOM40P23644 387 aaKnown RBP1.72□□□□□ -2.13
UBP1YDL122W ASF2P32448 525 aaPredicted RBP1.72□□□□□ -2.13
UBP1YDL122W ZRT1P32804 376 aa1.72□□□□□ -2.13
UBP1YDL122W BIG1P38813 335 aa1.72□□□□□ -2.13
UBP1YDL122W PCL6P40038 420 aa1.72□□□□□ -2.13
UBP1YDL122W CAF40P53829 373 aa1.72□□□□□ -2.13
UBP1YDL122W YNL140CP53910 189 aa1.72□□□□□ -2.13
UBP1YDL122W YMR181CQ03231 154 aa1.72□□□□□ -2.13
UBP1YDL122W BNA7Q04066 261 aa1.72□□□□□ -2.13
UBP1YDL122W YLR283WQ05867 314 aa1.72□□□□□ -2.13
UBP1YDL122W MCP1Q12106 302 aa1.72□□□□□ -2.13
UBP1YDL122W APC9Q12107 265 aa1.72□□□□□ -2.13
UBP1YDL122W YLR108CQ12259 485 aa1.72□□□□□ -2.13
UBP1YDL122W YAL064W-BO13512 126 aa1.71□□□□□ -2.14
UBP1YDL122W FUS3P16892 353 aaKnown RBP1.71□□□□□ -2.14
UBP1YDL122W GRX2P17695 143 aaKnown RBP1.71□□□□□ -2.14
UBP1YDL122W MDM10P18409 493 aa1.71□□□□□ -2.14
UBP1YDL122W AIM29P36154 155 aa1.71□□□□□ -2.14
UBP1YDL122W PRS4P38063 326 aaPredicted RBP1.71□□□□□ -2.14
UBP1YDL122W RIB5P38145 238 aa1.71□□□□□ -2.14
UBP1YDL122W COA1P40452 197 aa1.71□□□□□ -2.14
UBP1YDL122W YCH1P42937 148 aa1.71□□□□□ -2.14
UBP1YDL122W YGR210CP42942 411 aa1.71□□□□□ -2.14
UBP1YDL122W SPG4Q04438 115 aa1.71□□□□□ -2.14
UBP1YDL122W YMR254CQ04838 102 aa1.71□□□□□ -2.14
UBP1YDL122W NDE2Q07500 545 aa1.71□□□□□ -2.14
UBP1YDL122W SNX3Q08826 162 aaKnown RBP1.71□□□□□ -2.14
UBP1YDL122W ATP6P00854 259 aa1.71□□□□□ -2.14
UBP1YDL122W MATALPHA1P0CY06 175 aa1.71□□□□□ -2.14
UBP1YDL122W HMLALPHA1P0CY07 175 aa1.71□□□□□ -2.14
UBP1YDL122W NHP6BP11633 99 aaKnown RBP1.71□□□□□ -2.14
UBP1YDL122W MRPS28P21771 286 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms