RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W NUP84P52891 726 aa2.13□□□□□ -2.07
UBC9YDL064W CGI121Q03705 181 aaKnown RBP2.13□□□□□ -2.07
UBC9YDL064W Q0255P03881 472 aa2.12□□□□□ -2.07
UBC9YDL064W SNX4P47057 423 aa2.12□□□□□ -2.07
UBC9YDL064W NOP13P53883 403 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
UBC9YDL064W INM2Q05533 292 aa2.12□□□□□ -2.07
UBC9YDL064W COX5AP00424 153 aa2.11□□□□□ -2.07
UBC9YDL064W IPP1P00817 287 aaKnown RBP2.11□□□□□ -2.07
UBC9YDL064W SNA3P14359 133 aa2.11□□□□□ -2.07
UBC9YDL064W MRPL25P23369 157 aa2.11□□□□□ -2.07
UBC9YDL064W SCM4P32564 187 aa2.11□□□□□ -2.07
UBC9YDL064W SRB4P32569 687 aa2.11□□□□□ -2.07
UBC9YDL064W GRE3P38715 327 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
UBC9YDL064W FCY21P40039 528 aa2.11□□□□□ -2.07
UBC9YDL064W YER085CP40058 173 aa2.11□□□□□ -2.07
UBC9YDL064W ARC15P40518 154 aaRIP-Chip data2.11□□□□□ -2.07not detected
UBC9YDL064W TRM9P49957 279 aa2.11□□□□□ -2.07
UBC9YDL064W GTR2P53290 341 aa2.11□□□□□ -2.07
UBC9YDL064W FAR8Q05040 523 aa2.11□□□□□ -2.07
UBC9YDL064W YLR283WQ05867 314 aa2.11□□□□□ -2.07
UBC9YDL064W DSF1P0CX08 502 aa2.1□□□□□ -2.07
UBC9YDL064W YNR073CP0CX09 502 aa2.1□□□□□ -2.07
UBC9YDL064W CCA1P21269 546 aa2.1□□□□□ -2.07
UBC9YDL064W NTF2P33331 125 aaKnown RBP2.1□□□□□ -2.07
UBC9YDL064W YOR062CP36025 268 aa2.1□□□□□ -2.07
UBC9YDL064W YMR144WP40214 342 aaKnown RBP2.1□□□□□ -2.07
UBC9YDL064W CAT5P41735 233 aa2.1□□□□□ -2.07
UBC9YDL064W YJL027CP47063 138 aaPredicted RBP2.1□□□□□ -2.07
UBC9YDL064W LIA1P47120 325 aaKnown RBP2.1□□□□□ -2.07
UBC9YDL064W TOS8P53147 276 aa2.1□□□□□ -2.07
UBC9YDL064W YPL257WQ08974 193 aa2.1□□□□□ -2.07
UBC9YDL064W FKS1P38631 1876 aaKnown RBP2.09□□□□□ -2.07
UBC9YDL064W RHO1P06780 209 aaKnown RBP2.09□□□□□ -2.07
UBC9YDL064W CDC10P25342 322 aaKnown RBP2.09□□□□□ -2.07
UBC9YDL064W YJR149WP47177 404 aa2.09□□□□□ -2.07
UBC9YDL064W DCR2Q05924 578 aa2.09□□□□□ -2.07
UBC9YDL064W NIP7Q08962 181 aaKnown RBP2.09□□□□□ -2.07
UBC9YDL064W EMC6Q12431 108 aa2.09□□□□□ -2.07
UBC9YDL064W YHR086W-AQ3E746 53 aa2.09□□□□□ -2.07
UBC9YDL064W DOA4P32571 926 aa2.08□□□□□ -2.08
UBC9YDL064W VPS21P36017 210 aaKnown RBP2.08□□□□□ -2.08
UBC9YDL064W YPT52P36018 234 aaKnown RBP2.08□□□□□ -2.08
UBC9YDL064W RPA43P46669 326 aa2.08□□□□□ -2.08
UBC9YDL064W RPC17P47076 161 aa2.08□□□□□ -2.08
UBC9YDL064W MHT1Q12525 324 aa2.08□□□□□ -2.08
UBC9YDL064W HTL1Q9URQ5 78 aa2.08□□□□□ -2.08
UBC9YDL064W CUE1P38428 203 aa2.07□□□□□ -2.08
UBC9YDL064W FIS1P40515 155 aa2.07□□□□□ -2.08
UBC9YDL064W AKR2Q12013 749 aa2.07□□□□□ -2.08
UBC9YDL064W YOR283WQ12040 230 aaKnown RBP2.07□□□□□ -2.08
UBC9YDL064W RIB1P38066 345 aa2.06□□□□□ -2.08
UBC9YDL064W NRG2P38082 220 aa2.06□□□□□ -2.08
UBC9YDL064W MIC12P38341 106 aa2.06□□□□□ -2.08
UBC9YDL064W RPF1P38805 295 aaKnown RBP2.06□□□□□ -2.08
UBC9YDL064W PEX17P40155 199 aa2.06□□□□□ -2.08
UBC9YDL064W RMR1P53060 241 aa2.06□□□□□ -2.08
UBC9YDL064W YMR279CQ03263 540 aa2.06□□□□□ -2.08
UBC9YDL064W ATG39Q06159 398 aa2.06□□□□□ -2.08
UBC9YDL064W SIR4P11978 1358 aa2.06□□□□□ -2.08
UBC9YDL064W THP2O13539 261 aaKnown RBP2.05□□□□□ -2.08
UBC9YDL064W FCY2P17064 533 aa2.05□□□□□ -2.08
UBC9YDL064W VMA11P32842 164 aa2.05□□□□□ -2.08
UBC9YDL064W URA8P38627 578 aaPredicted RBP2.05□□□□□ -2.08
UBC9YDL064W RTR1P40084 226 aaPredicted RBP2.05□□□□□ -2.08
UBC9YDL064W ALG13P53178 202 aa2.05□□□□□ -2.08
UBC9YDL064W ERV29P53337 310 aa2.05□□□□□ -2.08
UBC9YDL064W RAS2P01120 322 aaKnown RBP2.04□□□□□ -2.08
UBC9YDL064W ARG80P07249 177 aa2.04□□□□□ -2.08
UBC9YDL064W BCY1P07278 416 aaKnown RBP2.04□□□□□ -2.08
UBC9YDL064W YMR31P19955 123 aa2.04□□□□□ -2.08
UBC9YDL064W SRY1P36007 326 aa2.04□□□□□ -2.08
UBC9YDL064W ECM33P38248 429 aaKnown RBP2.04□□□□□ -2.08
UBC9YDL064W MCM22P47167 239 aa2.04□□□□□ -2.08
UBC9YDL064W NSA1P53136 463 aaPredicted RBP2.04□□□□□ -2.08
UBC9YDL064W YGR026WP53217 278 aa2.04□□□□□ -2.08
UBC9YDL064W TPO4Q12256 659 aa2.04□□□□□ -2.08
UBC9YDL064W ATO3Q12359 275 aa2.04□□□□□ -2.08
UBC9YDL064W PUT1P09368 476 aa2.03□□□□□ -2.08
UBC9YDL064W BMH2P34730 273 aaKnown RBP2.03□□□□□ -2.08
UBC9YDL064W RTC3P38804 111 aaPredicted RBP2.03□□□□□ -2.08
UBC9YDL064W YAR068WP39564 161 aa2.03□□□□□ -2.08
UBC9YDL064W HAM1P47119 197 aaKnown RBP2.03□□□□□ -2.08
UBC9YDL064W YML096WQ04489 525 aa2.03□□□□□ -2.08
UBC9YDL064W RNH1Q04740 348 aa2.03□□□□□ -2.08
UBC9YDL064W YOR020W-AQ3E824 90 aa2.03□□□□□ -2.08
UBC9YDL064W ADH3P07246 375 aaKnown RBP2.02□□□□□ -2.09
UBC9YDL064W VMA6P32366 345 aaKnown RBP2.02□□□□□ -2.09
UBC9YDL064W YBR063CP38083 404 aa2.02□□□□□ -2.09
UBC9YDL064W OTU1P43558 301 aa2.02□□□□□ -2.09
UBC9YDL064W ILM1P47155 203 aa2.02□□□□□ -2.09
UBC9YDL064W TIM11P81449 96 aaPredicted RBP2.02□□□□□ -2.09
UBC9YDL064W CDC123Q05791 360 aa2.02□□□□□ -2.09
UBC9YDL064W SPT3P06844 337 aa2.01□□□□□ -2.09
UBC9YDL064W URA6P15700 204 aa2.01□□□□□ -2.09
UBC9YDL064W GRX2P17695 143 aaKnown RBP2.01□□□□□ -2.09
UBC9YDL064W RPL24BP24000 155 aaKnown RBP2.01□□□□□ -2.09
UBC9YDL064W PPA2P28239 310 aa2.01□□□□□ -2.09
UBC9YDL064W YHR180WP38868 163 aa2.01□□□□□ -2.09
UBC9YDL064W YJR056CP47115 236 aa2.01□□□□□ -2.09
UBC9YDL064W MRPS8Q03799 155 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms