RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C UTR5P32630 166 aa5.5□□□□□ -1.53
RGD1YBR260C PPZ2P33329 710 aa5.5□□□□□ -1.53
RGD1YBR260C PHO11P35842 467 aa5.5□□□□□ -1.53
RGD1YBR260C AME1P38313 324 aa5.5□□□□□ -1.53
RGD1YBR260C PHO12P38693 467 aa5.5□□□□□ -1.53
RGD1YBR260C IRC22P40006 225 aa5.5□□□□□ -1.53
RGD1YBR260C RRD1P40454 393 aaKnown RBP5.5□□□□□ -1.53
RGD1YBR260C MET28P40573 187 aa5.5□□□□□ -1.53
RGD1YBR260C CDC40P40968 455 aaPredicted RBP5.5□□□□□ -1.53
RGD1YBR260C CIN2P46670 268 aa5.5□□□□□ -1.53
RGD1YBR260C IKS1P47042 667 aa5.5□□□□□ -1.53
RGD1YBR260C MIC26P50087 233 aa5.5□□□□□ -1.53
RGD1YBR260C RIB4P50861 169 aaPredicted RBP5.5□□□□□ -1.53
RGD1YBR260C THG1P53215 237 aaKnown RBP5.5□□□□□ -1.53
RGD1YBR260C YNL134CP53912 376 aaKnown RBP5.5□□□□□ -1.53
RGD1YBR260C NRG1Q03125 231 aa5.5□□□□□ -1.53
RGD1YBR260C YDR391CQ04170 232 aa5.5□□□□□ -1.53
RGD1YBR260C MCH1Q07376 486 aa5.5□□□□□ -1.53
RGD1YBR260C YCT1Q12235 531 aa5.5□□□□□ -1.53
RGD1YBR260C RAX2Q12465 1220 aa5.5□□□□□ -1.53
RGD1YBR260C TDH3P00359 332 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
RGD1YBR260C AGP1P25376 633 aa5.5□□□□□ -1.53
RGD1YBR260C DCG1P32460 244 aa5.5□□□□□ -1.53
RGD1YBR260C MTC7P32633 139 aa5.5□□□□□ -1.53
RGD1YBR260C YPT53P36019 220 aa5.5□□□□□ -1.53
RGD1YBR260C RPL14AP36105 138 aaKnown RBP5.5□□□□□ -1.53
RGD1YBR260C TRS20P38334 175 aa5.5□□□□□ -1.53
RGD1YBR260C RPL14BP38754 138 aaKnown RBP5.5□□□□□ -1.53
RGD1YBR260C YEL073CP39974 107 aa5.5□□□□□ -1.53
RGD1YBR260C DLS1P40366 167 aa5.5□□□□□ -1.53
RGD1YBR260C GTS1P40956 396 aa5.5□□□□□ -1.53
RGD1YBR260C NIF3P53081 288 aa5.5□□□□□ -1.53
RGD1YBR260C MTQ2Q03920 221 aaPredicted RBP5.5□□□□□ -1.53
RGD1YBR260C GRX8Q05926 109 aa5.5□□□□□ -1.53
RGD1YBR260C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
RGD1YBR260C YOR378WQ08902 515 aa5.5□□□□□ -1.53
RGD1YBR260C ODC2Q99297 307 aa5.5□□□□□ -1.53
RGD1YBR260C MSW1P04803 379 aa5.49□□□□□ -1.53
RGD1YBR260C TY2A-LR1P0C2J4 438 aa5.49□□□□□ -1.53
RGD1YBR260C TY2A-CP25383 438 aa5.49□□□□□ -1.53
RGD1YBR260C CSE2P33308 149 aa5.49□□□□□ -1.53
RGD1YBR260C CBP4P37267 147 aa5.49□□□□□ -1.53
RGD1YBR260C YHL041WP38730 149 aa5.49□□□□□ -1.53
RGD1YBR260C ACA1P39970 489 aa5.49□□□□□ -1.53
RGD1YBR260C AVT7P40501 490 aa5.49□□□□□ -1.53
RGD1YBR260C YPL080CQ02826 108 aa5.49□□□□□ -1.53
RGD1YBR260C TY2A-DR2Q03483 438 aa5.49□□□□□ -1.53
RGD1YBR260C RCE1Q03530 315 aa5.49□□□□□ -1.53
RGD1YBR260C YML083CQ04526 418 aa5.49□□□□□ -1.53
RGD1YBR260C ADH6Q04894 360 aaKnown RBP5.49□□□□□ -1.53
RGD1YBR260C TY2A-BQ12260 438 aa5.49□□□□□ -1.53
RGD1YBR260C TY2A-OR2Q12293 438 aa5.49□□□□□ -1.53
RGD1YBR260C TY2A-DR1Q12392 438 aa5.49□□□□□ -1.53
RGD1YBR260C TY2A-OR1Q12439 438 aa5.49□□□□□ -1.53
RGD1YBR260C TY2A-DR3Q99303 438 aa5.49□□□□□ -1.53
RGD1YBR260C MES1P00958 751 aaKnown RBP5.48□□□□□ -1.53
RGD1YBR260C PHS1P40857 217 aa5.48□□□□□ -1.53
RGD1YBR260C ATG27P46989 271 aa5.48□□□□□ -1.53
RGD1YBR260C YML018CQ03730 393 aa5.48□□□□□ -1.53
RGD1YBR260C PAU23Q07987 124 aa5.48□□□□□ -1.53
RGD1YBR260C PRR2Q12310 699 aa5.48□□□□□ -1.53
RGD1YBR260C PAU17Q12370 124 aa5.48□□□□□ -1.53
RGD1YBR260C PDH1Q12428 516 aaKnown RBP5.48□□□□□ -1.53
RGD1YBR260C IZH2Q12442 317 aa5.48□□□□□ -1.53
RGD1YBR260C YOR338WQ99326 363 aa5.48□□□□□ -1.53
RGD1YBR260C CPA1P07258 411 aaKnown RBP5.48□□□□□ -1.53
RGD1YBR260C YOL162WP0CF19 215 aa5.48□□□□□ -1.53
RGD1YBR260C HAP4P14064 554 aa5.48□□□□□ -1.53
RGD1YBR260C TKL1P23254 680 aaKnown RBP5.48□□□□□ -1.53
RGD1YBR260C MSS51P32335 436 aa5.48□□□□□ -1.53
RGD1YBR260C PRP18P33411 251 aaPredicted RBP5.48□□□□□ -1.53
RGD1YBR260C MRPL27P36526 146 aaPredicted RBP5.48□□□□□ -1.53
RGD1YBR260C HEM14P40012 539 aa5.48□□□□□ -1.53
RGD1YBR260C RPA43P46669 326 aa5.48□□□□□ -1.53
RGD1YBR260C YPR011CQ12251 326 aa5.48□□□□□ -1.53
RGD1YBR260C AFG1P32317 509 aa5.47□□□□□ -1.53
RGD1YBR260C SLC1P33333 303 aa5.47□□□□□ -1.53
RGD1YBR260C YEA6P39953 335 aa5.47□□□□□ -1.53
RGD1YBR260C GIP2P40036 548 aa5.47□□□□□ -1.53
RGD1YBR260C HST3P53687 447 aa5.47□□□□□ -1.53
RGD1YBR260C PUS5Q06244 254 aa5.47□□□□□ -1.53
RGD1YBR260C ISA2Q12425 185 aa5.47□□□□□ -1.53
RGD1YBR260C POR1P04840 283 aaKnown RBP5.47□□□□□ -1.53
RGD1YBR260C HVG1P0CE11 249 aa5.47□□□□□ -1.53
RGD1YBR260C SCH9P11792 824 aaKnown RBP5.47□□□□□ -1.53
RGD1YBR260C TRX3P25372 127 aa5.47□□□□□ -1.53
RGD1YBR260C ADK2P26364 225 aa5.47□□□□□ -1.53
RGD1YBR260C FMO1P38866 432 aa5.47□□□□□ -1.53
RGD1YBR260C PFS1P38872 237 aa5.47□□□□□ -1.53
RGD1YBR260C IST3P40565 148 aaPredicted RBP5.47□□□□□ -1.53
RGD1YBR260C BAT2P47176 376 aaKnown RBP5.47□□□□□ -1.53
RGD1YBR260C YNL260CP53846 198 aa5.47□□□□□ -1.53
RGD1YBR260C GIM5Q04493 163 aa5.47□□□□□ -1.53
RGD1YBR260C DFG5Q05031 458 aa5.47□□□□□ -1.53
RGD1YBR260C CTS2Q06350 511 aa5.47□□□□□ -1.53
RGD1YBR260C YDL157CQ12082 118 aa5.47□□□□□ -1.53
RGD1YBR260C TPT1Q12272 230 aaKnown RBP5.47□□□□□ -1.53
RGD1YBR260C SLY41P22215 453 aa5.46□□□□□ -1.54
RGD1YBR260C MIH1P23748 554 aa5.46□□□□□ -1.54
RGD1YBR260C ERG3P32353 365 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms