RNA–Protein interactions for RNA: YBL014C

RRN6, Transcript of Component of the core factor (CF) rDNA transcription factor complex, yeast

Gene RRN6, Length 2,685 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN6	YBL014C	SER3	P40054	469 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	YER137C	P40083	148 aa	Known RBP	3.14	□□□□□ -1.91
RRN6	YBL014C	AVT7	P40501	490 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	BXI1	P48558	297 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	SLI1	P53304	468 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	KAP120	Q02932	1032 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	PLP1	Q04004	230 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	TRI1	Q05024	226 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	YLR352W	Q06479	807 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	YLR031W	Q07978	186 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	YOR385W	Q08909	290 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	YRM1	Q12340	786 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	RRI1	Q12468	440 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	SEC16	P48415	2195 aa	Known RBP	3.14	□□□□□ -1.91
RRN6	YBL014C	MSS1	P32559	526 aa	Predicted RBP	3.14	□□□□□ -1.91
RRN6	YBL014C	FLO10	P36170	1169 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	RRF1	P38771	230 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	YNG1	Q08465	219 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	POM34	Q12445	299 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	YBR298C-A	Q8TGK4	73 aa		3.14	□□□□□ -1.91
RRN6	YBL014C	MES1	P00958	751 aa	Known RBP	3.13	□□□□□ -1.91
RRN6	YBL014C	URA6	P15700	204 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	CKS1	P20486	150 aa	Known RBP	3.13	□□□□□ -1.91
RRN6	YBL014C	HXT2	P23585	541 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	ADH7	P25377	361 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	ARO4	P32449	370 aa	Known RBP	3.13	□□□□□ -1.91
RRN6	YBL014C	MRPL27	P36526	146 aa	Predicted RBP	3.13	□□□□□ -1.91
RRN6	YBL014C	YIL169C	P40442	995 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	YGR210C	P42942	411 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	CTK2	P46962	323 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	IKS1	P47042	667 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	LOH1	P47055	219 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	RSM27	P53305	110 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	NRG1	Q03125	231 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	FRE3	Q08905	711 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	SRL2	Q12020	392 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	TGS1	Q12052	315 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	TRM13	Q12383	476 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	ISA2	Q12425	185 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	CDC36	P06100	191 aa	Predicted RBP	3.13	□□□□□ -1.91
RRN6	YBL014C	ARG80	P07249	177 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	PHO2	P07269	559 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	DSF1	P0CX08	502 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	YNR073C	P0CX09	502 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	MRP17	P28778	131 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	AFG1	P32317	509 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	FMT1	P32785	401 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	PHM8	P40025	321 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	ATF1	P40353	525 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	ADO1	P47143	340 aa	Known RBP	3.13	□□□□□ -1.91
RRN6	YBL014C	PHB2	P50085	310 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	NRK1	P53915	240 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	RNH201	P53942	307 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	ACS1	Q01574	713 aa		3.13	□□□□□ -1.91
RRN6	YBL014C	HNT1	Q04344	158 aa	Known RBP	3.13	□□□□□ -1.91
RRN6	YBL014C	CDC39	P25655	2108 aa	Known RBP	3.13	□□□□□ -1.91
RRN6	YBL014C	PUT1	P09368	476 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	NAM2	P11325	894 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	HNM1	P19807	563 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	VMA5	P31412	392 aa	Known RBP	3.12	□□□□□ -1.91
RRN6	YBL014C	ACB1	P31787	87 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	UMP1	P38293	148 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	LSM1	P47017	172 aa	Known RBP	3.12	□□□□□ -1.91
RRN6	YBL014C	YGL159W	P53110	370 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	COX18	P53239	316 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
RRN6	YBL014C	MRP51	Q02950	344 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	COQ11	Q05892	277 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	MCT1	Q12283	360 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	BBP1	Q12365	385 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	FMP16	Q12497	93 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	Q0144	Q9ZZW2	109 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	IRA1	P18963	3092 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	COX5B	P00425	151 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	CBP6	P07253	162 aa	Predicted RBP	3.12	□□□□□ -1.91
RRN6	YBL014C	CUP1-1	P0CX80	61 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	CUP1-2	P0CX81	61 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	GEP4	P38812	185 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	VMA7	P39111	118 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	PTI1	P39927	425 aa	Predicted RBP	3.12	□□□□□ -1.91
RRN6	YBL014C	ECM27	P47144	725 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	OKP1	P53298	406 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	GIM3	P53900	129 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	HHT1	P61830	136 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	RSM23	Q01163	450 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	DIG2	Q03373	323 aa	Known RBP	3.12	□□□□□ -1.91
RRN6	YBL014C	YDR387C	Q04162	555 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	RTR2	Q12378	196 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	YGL194C-A	Q2V2P6	80 aa		3.12	□□□□□ -1.91
RRN6	YBL014C	CPR4	P25334	318 aa		3.11	□□□□□ -1.91
RRN6	YBL014C	AGA2	P32781	87 aa		3.11	□□□□□ -1.91
RRN6	YBL014C	PPZ2	P33329	710 aa		3.11	□□□□□ -1.91
RRN6	YBL014C	YKL063C	P35725	167 aa		3.11	□□□□□ -1.91
RRN6	YBL014C	PAN3	P36102	679 aa	Predicted RBP	3.11	□□□□□ -1.91
RRN6	YBL014C	YBR096W	P38256	230 aa		3.11	□□□□□ -1.91
RRN6	YBL014C	SEC24	P40482	926 aa	Known RBP	3.11	□□□□□ -1.91
RRN6	YBL014C	SNX4	P47057	423 aa		3.11	□□□□□ -1.91
RRN6	YBL014C	HRI1	Q05905	244 aa	Known RBP	3.11	□□□□□ -1.91
RRN6	YBL014C	SYM1	Q06563	197 aa		3.11	□□□□□ -1.91
RRN6	YBL014C	ARR3	Q06598	404 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms