RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAR009C	YAR009C	YOR214C	Q12282	236 aa		0.91	□□□□□ -2.26
YAR009C	YAR009C	GAL3	P13045	520 aa		0.9	□□□□□ -2.26
YAR009C	YAR009C	CPT1	P17898	393 aa		0.9	□□□□□ -2.26
YAR009C	YAR009C	YHI9	P38765	294 aa		0.9	□□□□□ -2.26
YAR009C	YAR009C	YNL194C	P40169	301 aa		0.9	□□□□□ -2.26
YAR009C	YAR009C	MIC19	P43594	170 aa		0.9	□□□□□ -2.26
YAR009C	YAR009C	SHE4	P51534	789 aa		0.9	□□□□□ -2.26
YAR009C	YAR009C	TPC1	P53257	314 aa		0.9	□□□□□ -2.26
YAR009C	YAR009C	CGI121	Q03705	181 aa	Known RBP	0.9	□□□□□ -2.26
YAR009C	YAR009C	VTI1	Q04338	217 aa		0.9	□□□□□ -2.26
YAR009C	YAR009C	RDL2	Q08742	149 aa	Known RBP	0.9	□□□□□ -2.26
YAR009C	YAR009C	MCP1	Q12106	302 aa		0.9	□□□□□ -2.26
YAR009C	YAR009C	RUD3	Q12234	484 aa	Known RBP	0.9	□□□□□ -2.26
YAR009C	YAR009C	RPL18A	P0CX49	186 aa	Known RBP	0.9	□□□□□ -2.27
YAR009C	YAR009C	RPL18B	P0CX50	186 aa	Known RBP	0.9	□□□□□ -2.27
YAR009C	YAR009C	SPS100	P13130	326 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	SRB4	P32569	687 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	YKL187C	P34231	750 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	ZRT3	P34240	503 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	COA1	P40452	197 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	LSM3	P57743	89 aa	Known RBP	0.9	□□□□□ -2.27
YAR009C	YAR009C	MHT1	Q12525	324 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	YCL012C	Q8J0M4	134 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	RRG9	P40156	214 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	YIL059C	P40520	121 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	GTO1	P48239	356 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	SDS23	P53172	527 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	ECM19	Q06011	112 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	YPL245W	Q12179	454 aa	Known RBP	0.9	□□□□□ -2.27
YAR009C	YAR009C	YPL229W	Q99395	206 aa		0.9	□□□□□ -2.27
YAR009C	YAR009C	NSP1	P14907	823 aa	Known RBP	0.89	□□□□□ -2.27
YAR009C	YAR009C	CUP2	P15315	225 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	ECM31	P38122	312 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	YHR035W	P38769	630 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	RCY1	P39531	840 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	UTP25	P40498	721 aa	Known RBP	0.89	□□□□□ -2.27
YAR009C	YAR009C	COS4	P43542	379 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	YGL118C	P53132	145 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	CAX4	P53223	239 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	SMD1	Q02260	146 aa	Predicted RBP	0.89	□□□□□ -2.27
YAR009C	YAR009C	DFM1	Q12743	341 aa	Known RBP	0.89	□□□□□ -2.27
YAR009C	YAR009C	YKL018C-A	Q3E7A7	99 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	RAD3	P06839	778 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	MRPL20	P22354	195 aa	Predicted RBP	0.89	□□□□□ -2.27
YAR009C	YAR009C	YPS1	P32329	569 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	AGA2	P32781	87 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	SLM1	P40485	686 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	MSA1	Q08471	629 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	RFM1	Q12192	310 aa		0.89	□□□□□ -2.27
YAR009C	YAR009C	FAS1	P07149	2051 aa	Known RBP	0.89	□□□□□ -2.27
YAR009C	YAR009C	CDC37	P06101	506 aa	Known RBP	0.88	□□□□□ -2.27
YAR009C	YAR009C	NMT1	P14743	455 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	SWD2	P36104	329 aa	Predicted RBP	0.88	□□□□□ -2.27
YAR009C	YAR009C	YDR249C	Q03787	373 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	VAC14	Q06708	880 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	COQ10	Q08058	207 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	MIM1	Q08176	113 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	TFC7	Q12415	435 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	ZRT1	P32804	376 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	CAF4	P36130	643 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	FMP23	P38231	175 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	PET8	P38921	284 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	AIM20	P40451	204 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	BNA6	P43619	295 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	YNR066C	P53752	436 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	YPL080C	Q02826	108 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	CAB5	Q03941	241 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	STE23	Q06010	1027 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	VIK1	Q12045	647 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	GET4	Q12125	312 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	UTP23	Q12339	254 aa	Known RBP	0.88	□□□□□ -2.27
YAR009C	YAR009C	TRM10	Q12400	293 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	STF1	P01098	86 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	CBP2	P03874	630 aa	Predicted RBP	0.88	□□□□□ -2.27
YAR009C	YAR009C	DPM1	P14020	267 aa	Known RBP	0.88	□□□□□ -2.27
YAR009C	YAR009C	INO2	P26798	304 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	MEI4	P29467	408 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	TPO5	P36029	618 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	SSO2	P39926	295 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	SCC4	P40090	624 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	YIL001W	P40560	513 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	INA22	P40576	216 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	YFR035C	P43608	114 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	SLM2	P53955	656 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	SNX41	Q04053	625 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	MGR3	Q04472	501 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	PRP46	Q12417	451 aa	Predicted RBP	0.88	□□□□□ -2.27
YAR009C	YAR009C	YPR1	Q12458	312 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	HFA1	P32874	2273 aa		0.88	□□□□□ -2.27
YAR009C	YAR009C	CCW14	O13547	238 aa		0.87	□□□□□ -2.27
YAR009C	YAR009C	PET18	P25362	215 aa		0.87	□□□□□ -2.27
YAR009C	YAR009C	SUR1	P33300	382 aa		0.87	□□□□□ -2.27
YAR009C	YAR009C	YET1	P35723	206 aa		0.87	□□□□□ -2.27
YAR009C	YAR009C	ASP1	P38986	381 aa	Predicted RBP	0.87	□□□□□ -2.27
YAR009C	YAR009C	SOP4	P39543	234 aa	Predicted RBP	0.87	□□□□□ -2.27
YAR009C	YAR009C	AYR1	P40471	297 aa		0.87	□□□□□ -2.27
YAR009C	YAR009C	APS3	P47064	194 aa		0.87	□□□□□ -2.27
YAR009C	YAR009C	GPI8	P49018	411 aa		0.87	□□□□□ -2.27
YAR009C	YAR009C	MDM32	Q12171	622 aa		0.87	□□□□□ -2.27
YAR009C	YAR009C	Q0144	Q9ZZW2	109 aa		0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms