RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFA1	YAR007C	SUI1	P32911	108 aa	Known RBP	4.9	□□□□□ -1.62
RFA1	YAR007C	CHK1	P38147	527 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	JHD1	P40034	492 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	YIL161W	P40449	235 aa	Known RBP	4.9	□□□□□ -1.62
RFA1	YAR007C	GLC8	P41818	229 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	RPL9B	P51401	191 aa	Known RBP	4.9	□□□□□ -1.62
RFA1	YAR007C	ACS2	P52910	683 aa	Known RBP	4.9	□□□□□ -1.62
RFA1	YAR007C	YGL235W	P53071	178 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	ERG26	P53199	349 aa	Known RBP	4.9	□□□□□ -1.62
RFA1	YAR007C	MTM1	P53320	366 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	YDC1	Q02896	317 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	EKI1	Q03764	534 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	YDR248C	Q03786	193 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	RUB1	Q03919	77 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	CAB5	Q03941	241 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	ATC1	Q04005	294 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	YPR053C	Q6Q5F3	151 aa		4.9	□□□□□ -1.62
RFA1	YAR007C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RFA1	YAR007C	PAU19	P0CE85	124 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	PAU21	P0CE86	164 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	PAU22	P0CE87	164 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	RPB5	P20434	215 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	PDE1	P22434	369 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	PAU3	P25610	124 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RFA1	YAR007C	MRPS9	P38120	278 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	FLO5	P38894	1075 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	YGR149W	P48236	432 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	ALG12	P53730	551 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	SAE3	P89114	91 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	RSM23	Q01163	450 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	MRP51	Q02950	344 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	ROT1	Q03691	256 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	HNT1	Q04344	158 aa	Known RBP	4.9	□□□□□ -1.63
RFA1	YAR007C	TMN2	Q04562	672 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	RTT103	Q05543	409 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	YOL073C	Q08232	322 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	SRL2	Q12020	392 aa		4.9	□□□□□ -1.63
RFA1	YAR007C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.9	□□□□□ -1.63
RFA1	YAR007C	MSB2	P32334	1306 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	RPS25B	P0C0T4	108 aa	Known RBP	4.89	□□□□□ -1.63
RFA1	YAR007C	STE4	P18851	423 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	CPR2	P23285	205 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	COQ3	P27680	312 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	ALK2	P32789	676 aa	Predicted RBP	4.89	□□□□□ -1.63
RFA1	YAR007C	TIM12	P32830	109 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	TRS20	P38334	175 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	RPP1	P38786	293 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	RTC3	P38804	111 aa	Predicted RBP	4.89	□□□□□ -1.63
RFA1	YAR007C	PEX28	P38848	579 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	HEM14	P40012	539 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	PHS1	P40857	217 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	CCC1	P47818	322 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	CWC27	Q02770	301 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	INP1	Q03694	420 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	ROY1	Q04847	553 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	ASM4	Q05166	528 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	FDH1	Q08911	376 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	POM33	Q12164	279 aa		4.89	□□□□□ -1.63
RFA1	YAR007C	RPS25A	Q3E792	108 aa	Predicted RBP	4.89	□□□□□ -1.63
RFA1	YAR007C	RPL31A	P0C2H8	113 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	RPL31B	P0C2H9	113 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	MATALPHA1	P0CY06	175 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	HMLALPHA1	P0CY07	175 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	BGL2	P15703	313 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	SLC1	P33333	303 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	SKN7	P38889	622 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	YEA4	P40004	342 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	RPA34	P47006	233 aa	Predicted RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	YJR012C	P47087	207 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	NSA1	P53136	463 aa	Predicted RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	RMD9	P53140	646 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	YNR014W	P53719	212 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	ALG9	P53868	555 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	YVH1	Q02256	364 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	AKR2	Q12013	749 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	SUL2	Q12325	893 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	LAS17	Q12446	633 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	GDH1	P07262	454 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	ERG1	P32476	496 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	AGA2	P32781	87 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	UPS2	P35200	230 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	RPL14A	P36105	138 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	YBR096W	P38256	230 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	VBA2	P38358	474 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	RPL14B	P38754	138 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	NSA2	P40078	261 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	BUD8	P41698	603 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	PAU5	P43575	122 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	SCW4	P53334	386 aa	Known RBP	4.88	□□□□□ -1.63
RFA1	YAR007C	GIC2	Q06648	383 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	HRT1	Q08273	121 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	VAM3	Q12241	283 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	ATG5	Q12380	294 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	IZH2	Q12442	317 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	Q0182	Q9ZZW1	134 aa		4.88	□□□□□ -1.63
RFA1	YAR007C	RPS13	P05756	151 aa	Known RBP	4.87	□□□□□ -1.63
RFA1	YAR007C	MLF3	P32047	452 aa		4.87	□□□□□ -1.63
RFA1	YAR007C	ERG3	P32353	365 aa		4.87	□□□□□ -1.63
RFA1	YAR007C	WSS1	P38838	269 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms