RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	URA6	P15700	204 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	HOM6	P31116	359 aa	Known RBP	3.19	□□□□□ -1.9
YAL004W	YAL004W	QRI5	P32344	111 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	CAT2	P32796	670 aa	Known RBP	3.19	□□□□□ -1.9
YAL004W	YAL004W	ANR2	P36090	516 aa	Predicted RBP	3.19	□□□□□ -1.9
YAL004W	YAL004W	SPC34	P36131	295 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	GPX2	P38143	162 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	DER1	P38307	211 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	YHK8	P38776	514 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	YHR127W	P38833	243 aa	Known RBP	3.19	□□□□□ -1.9
YAL004W	YAL004W	IPT1	P38954	527 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	MET30	P39014	640 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	KRE29	P40026	464 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	DFG10	P40526	253 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	CIN5	P40917	295 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	PRM10	P42946	383 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	YJL043W	P47053	257 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	YJL016W	P47072	561 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	RBL2	P48606	106 aa	Known RBP	3.19	□□□□□ -1.9
YAL004W	YAL004W	NSA1	P53136	463 aa	Predicted RBP	3.19	□□□□□ -1.9
YAL004W	YAL004W	MMS2	P53152	137 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	ALG13	P53178	202 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	CDH1	P53197	566 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	YNR048W	P53740	393 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	SNO1	Q03144	224 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	YMR099C	Q03161	297 aa	Known RBP	3.19	□□□□□ -1.9
YAL004W	YAL004W	CTL1	Q03220	320 aa	Known RBP	3.19	□□□□□ -1.9
YAL004W	YAL004W	VPS68	Q12016	184 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	YPL245W	Q12179	454 aa	Known RBP	3.19	□□□□□ -1.9
YAL004W	YAL004W	SFM1	Q12314	213 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	SME1	Q12330	94 aa	Predicted RBP	3.19	□□□□□ -1.9
YAL004W	YAL004W	TRM10	Q12400	293 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	YDL199C	Q12407	687 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	YPR064W	Q12492	139 aa		3.19	□□□□□ -1.9
YAL004W	YAL004W	MDM35	O60200	86 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	RPS28B	P0C0X0	67 aa	Known RBP	3.18	□□□□□ -1.9
YAL004W	YAL004W	CBS2	P14905	389 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	MAK32	P23060	363 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	YCR100C	P25606	316 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	CPR3	P25719	182 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	MCH2	P36032	473 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	SRL3	P36167	246 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	SCO2	P38072	301 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	FMP23	P38231	175 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	SDS24	P38314	527 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	YEL073C	P39974	107 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	SPO73	P40031	143 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	AVT6	P40074	448 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	YIL169C	P40442	995 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	MEP2	P41948	499 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	BIR1	P47134	954 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	NUP57	P48837	541 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	IMD3	P50095	523 aa	Known RBP	3.18	□□□□□ -1.9
YAL004W	YAL004W	BRR6	P53062	197 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	EMC4	P53073	190 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	IMP4	P53941	290 aa	Known RBP	3.18	□□□□□ -1.9
YAL004W	YAL004W	TRM82	Q03774	444 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	YNG1	Q08465	219 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	RRS1	Q08746	203 aa	Known RBP	3.18	□□□□□ -1.9
YAL004W	YAL004W	YDL009C	Q12210	107 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	YPR011C	Q12251	326 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	IES3	Q12345	250 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.18	□□□□□ -1.9
YAL004W	YAL004W	MHF1	Q3E835	90 aa		3.18	□□□□□ -1.9
YAL004W	YAL004W	REP1	P03871	373 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	URE2	P23202	354 aa	Known RBP	3.17	□□□□□ -1.9
YAL004W	YAL004W	RPS1B	P23248	255 aa	Known RBP	3.17	□□□□□ -1.9
YAL004W	YAL004W	TRX3	P25372	127 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	UBC8	P28263	218 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	SPT4	P32914	102 aa	Predicted RBP	3.17	□□□□□ -1.9
YAL004W	YAL004W	NTF2	P33331	125 aa	Known RBP	3.17	□□□□□ -1.9
YAL004W	YAL004W	TIR2	P33890	251 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	PHD1	P36093	366 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
YAL004W	YAL004W	APQ12	P40532	138 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	WWM1	P43582	211 aa	Known RBP	3.17	□□□□□ -1.9
YAL004W	YAL004W	NQM1	P53228	333 aa	Predicted RBP	3.17	□□□□□ -1.9
YAL004W	YAL004W	CWC25	P53854	179 aa	Known RBP	3.17	□□□□□ -1.9
YAL004W	YAL004W	NRK1	P53915	240 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	RHO3	Q00245	231 aa	Known RBP	3.17	□□□□□ -1.9
YAL004W	YAL004W	MET31	Q03081	177 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	YMR010W	Q03687	405 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	MRPL51	Q06090	140 aa	Predicted RBP	3.17	□□□□□ -1.9
YAL004W	YAL004W	TIM18	Q08749	192 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	MOT1	P32333	1867 aa		3.17	□□□□□ -1.9
YAL004W	YAL004W	STE7	P06784	515 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	CAP2	P13517	287 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	DPM1	P14020	267 aa	Known RBP	3.16	□□□□□ -1.9
YAL004W	YAL004W	ERD1	P16151	362 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	CPT1	P17898	393 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	SCL1	P21243	252 aa	Known RBP	3.16	□□□□□ -1.9
YAL004W	YAL004W	PPH21	P23594	369 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	EXG1	P23776	448 aa	Known RBP	3.16	□□□□□ -1.9
YAL004W	YAL004W	TIP1	P27654	210 aa	Predicted RBP	3.16	□□□□□ -1.9
YAL004W	YAL004W	PMT2	P31382	759 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	SPS18	P32572	300 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	SEC17	P32602	292 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	JEN1	P36035	616 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	YPC1	P38298	316 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	COG3	P40094	801 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms