RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 TTPALQ9BTX7 342 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 RHOBTB2Q9BYZ6 727 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 CNTN3Q9P232 1028 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 ODF2LQ9ULJ1 636 aa18.68■□□□□ 0.58
BRCC3-202ENST00000340647 SRPRBQ9Y5M8 271 aaKnown RBP18.68■□□□□ 0.58
BRCC3-202ENST00000340647 SF3B1O75533 1304 aaKnown RBP eCLIP18.68■□□□□ 0.58
BRCC3-202ENST00000340647 A0A087X0B3 334 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 CCDC195A0A1B0GUA6 201 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 TMEM221A6NGB7 291 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 M0R296 226 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 TOM1L1O75674 476 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 PDCP20941 246 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 BRCC3P46736 316 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 MCL1Q07820 350 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 ZBTB41Q5SVQ8 909 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 DCLRE1AQ6PJP8 1040 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 ZPBP2Q6X784 338 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 CALML4Q96GE6 196 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 PHOX2BQ99453 314 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.67■□□□□ 0.58
BRCC3-202ENST00000340647 DAXXQ9UER7 740 aaPredicted RBP18.67■□□□□ 0.58
BRCC3-202ENST00000340647 USTQ9Y2C2 406 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 NR2E1Q9Y466 385 aa18.67■□□□□ 0.58
BRCC3-202ENST00000340647 TKTP29401 623 aaKnown RBP18.66■□□□□ 0.58
BRCC3-202ENST00000340647 DDIT3P35638 169 aa18.66■□□□□ 0.58
BRCC3-202ENST00000340647 TNFSF9P41273 254 aa18.66■□□□□ 0.58
BRCC3-202ENST00000340647 KREMEN2Q8NCW0 462 aa18.66■□□□□ 0.58
BRCC3-202ENST00000340647 HDAC7Q8WUI4 952 aa18.66■□□□□ 0.58
BRCC3-202ENST00000340647 SNX21Q969T3 373 aa18.66■□□□□ 0.58
BRCC3-202ENST00000340647 ACAP3Q96P50 834 aa18.66■□□□□ 0.58
BRCC3-202ENST00000340647 CCDC94Q9BW85 323 aaPredicted RBP18.66■□□□□ 0.58
BRCC3-202ENST00000340647 IKZF4Q9H2S9 585 aa18.66■□□□□ 0.58
BRCC3-202ENST00000340647 LIMD1Q9UGP4 676 aa18.66■□□□□ 0.58
BRCC3-202ENST00000340647 FBXW11Q9UKB1 542 aa18.66■□□□□ 0.58
BRCC3-202ENST00000340647 MORC2Q9Y6X9 1032 aaPredicted RBP18.66■□□□□ 0.58
BRCC3-202ENST00000340647 SCN1AP35498 2009 aa18.66■□□□□ 0.58
BRCC3-202ENST00000340647 B3GAT3O94766 335 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 PDGFBP01127 241 aaPredicted RBP18.65■□□□□ 0.58
BRCC3-202ENST00000340647 PIGRP01833 764 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 HARSP12081 509 aaKnown RBP18.65■□□□□ 0.58
BRCC3-202ENST00000340647 NMT1P30419 496 aaKnown RBP18.65■□□□□ 0.58
BRCC3-202ENST00000340647 SMTNP53814 917 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 CEBPZQ03701 1054 aaKnown RBP18.65■□□□□ 0.58
BRCC3-202ENST00000340647 SIGLEC14Q08ET2 396 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 NOLC1Q14978 699 aaKnown RBP eCLIP18.65■□□□□ 0.58
BRCC3-202ENST00000340647 ZBTB6Q15916 424 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 PSMD5Q16401 504 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.65■□□□□ 0.58
BRCC3-202ENST00000340647 CEP57Q86XR8 500 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 LARP4BQ92615 738 aaKnown RBP18.65■□□□□ 0.58
BRCC3-202ENST00000340647 DDX27Q96GQ7 796 aaKnown RBP18.65■□□□□ 0.58
BRCC3-202ENST00000340647 MFSD14AQ96MC6 490 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 TCHPQ9BT92 498 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 PLEKHA4Q9H4M7 779 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 WDR6Q9NNW5 1121 aaKnown RBP18.65■□□□□ 0.58
BRCC3-202ENST00000340647 LARSQ9P2J5 1176 aaKnown RBP18.65■□□□□ 0.58
BRCC3-202ENST00000340647 ANKFY1Q9P2R3 1169 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 TBX20Q9UMR3 447 aa18.65■□□□□ 0.58
BRCC3-202ENST00000340647 TTC26A0AVF1 554 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 TISP43B9A030 160 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 STX6O43752 255 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 TBC1D4O60343 1298 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 CXCL8P10145 99 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 GTF2BQ00403 316 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 STRN3Q13033 797 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 SLC39A14Q15043 492 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 IER5LQ5T953 404 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 PRSS33Q8NF86 280 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 DNAJC19Q96DA6 116 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 UROC1Q96N76 676 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 MYADMQ96S97 322 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 STRA6Q9BX79 667 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 MTRRQ9UBK8 725 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 TUBGCP4Q9UGJ1 667 aa18.64■□□□□ 0.57
BRCC3-202ENST00000340647 MYMKA6NI61 221 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 ANKRD63C9JTQ0 380 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 PODXLO00592 558 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 TRAK2O60296 914 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 ZMYND10O75800 440 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 PPP1R37O75864 691 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 ADRB2P07550 413 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 NASPP49321 788 aaPredicted RBP18.63■□□□□ 0.57
BRCC3-202ENST00000340647 YARSP54577 528 aaKnown RBP18.63■□□□□ 0.57
BRCC3-202ENST00000340647 SPAG1Q07617 926 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 RAB33AQ14088 237 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 ZC2HC1CQ53FD0 456 aaPredicted RBP18.63■□□□□ 0.57
BRCC3-202ENST00000340647 APBB1IPQ7Z5R6 666 aaPredicted RBP18.63■□□□□ 0.57
BRCC3-202ENST00000340647 MYCT1Q8N699 235 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 TDRD5Q8NAT2 981 aaKnown RBP18.63■□□□□ 0.57
BRCC3-202ENST00000340647 PRKD2Q9BZL6 878 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 PARVGQ9HBI0 331 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 TOPORSQ9NS56 1045 aaPredicted RBP18.63■□□□□ 0.57
BRCC3-202ENST00000340647 KCNG1Q9UIX4 513 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 SORCS3Q9UPU3 1222 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 TSC2P49815 1807 aa18.63■□□□□ 0.57
BRCC3-202ENST00000340647 CLDN3O15551 220 aa18.62■□□□□ 0.57
BRCC3-202ENST00000340647 FAM13AO94988 1023 aa18.62■□□□□ 0.57
BRCC3-202ENST00000340647 OR1D2P34982 312 aa18.62■□□□□ 0.57
BRCC3-202ENST00000340647 ELAVL2Q12926 359 aaKnown RBP18.62■□□□□ 0.57
BRCC3-202ENST00000340647 MRPL58Q14197 206 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms