RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C CYT2Q00873 224 aa0.6□□□□□ -2.31
NIP100YPL174C VBA1Q04301 562 aa0.6□□□□□ -2.31
NIP100YPL174C YDR124WQ04608 324 aa0.6□□□□□ -2.31
NIP100YPL174C POX1P13711 748 aa0.6□□□□□ -2.31
NIP100YPL174C MDH2P22133 377 aa0.6□□□□□ -2.31
NIP100YPL174C MRPL39P36533 70 aa0.6□□□□□ -2.31
NIP100YPL174C COS8P38723 381 aa0.6□□□□□ -2.31
NIP100YPL174C BMT5P40493 336 aa0.6□□□□□ -2.31
NIP100YPL174C YGL185CP53100 379 aa0.6□□□□□ -2.31
NIP100YPL174C YGR219WP53307 113 aa0.6□□□□□ -2.31
NIP100YPL174C CAB4P53332 305 aa0.6□□□□□ -2.31
NIP100YPL174C SWI1P09547 1314 aa0.59□□□□□ -2.31
NIP100YPL174C RPL9AP05738 191 aaKnown RBP0.59□□□□□ -2.31
NIP100YPL174C YIL001WP40560 513 aa0.59□□□□□ -2.31
NIP100YPL174C RPL9BP51401 191 aaKnown RBP0.59□□□□□ -2.31
NIP100YPL174C FMP16Q12497 93 aa0.59□□□□□ -2.31
NIP100YPL174C YHR125WP38831 101 aa0.59□□□□□ -2.32
NIP100YPL174C PEX18P38855 283 aa0.59□□□□□ -2.32
NIP100YPL174C YMR279CQ03263 540 aa0.59□□□□□ -2.32
NIP100YPL174C GMC2Q06201 188 aa0.59□□□□□ -2.32
NIP100YPL174C ATG17Q06410 417 aa0.59□□□□□ -2.32
NIP100YPL174C MEU1Q07938 337 aaKnown RBP RIP-Chip data0.59□□□□□ -2.32not detected
NIP100YPL174C MDH3P32419 343 aaKnown RBP RIP-Chip data0.58□□□□□ -2.32not detected
NIP100YPL174C MRPL40P36534 297 aa0.58□□□□□ -2.32
NIP100YPL174C ECM13P38195 257 aa0.58□□□□□ -2.32
NIP100YPL174C FZO1P38297 855 aa0.58□□□□□ -2.32
NIP100YPL174C MNT4P53745 580 aa0.58□□□□□ -2.32
NIP100YPL174C OST6Q03723 332 aa0.58□□□□□ -2.32
NIP100YPL174C MRPS8Q03799 155 aa0.58□□□□□ -2.32
NIP100YPL174C ERV41Q04651 352 aa0.58□□□□□ -2.32
NIP100YPL174C RRP40Q08285 240 aaKnown RBP0.58□□□□□ -2.32
NIP100YPL174C CCA1P21269 546 aa0.58□□□□□ -2.32
NIP100YPL174C YAR068WP39564 161 aa0.58□□□□□ -2.32
NIP100YPL174C PRO2P54885 456 aaKnown RBP0.58□□□□□ -2.32
NIP100YPL174C YRF1-1P0CX20 1796 aa0.58□□□□□ -2.32
NIP100YPL174C YRF1-5P0CX21 1796 aa0.58□□□□□ -2.32
NIP100YPL174C YRF1-8P0CX22 1796 aa0.58□□□□□ -2.32
NIP100YPL174C FLO9P39712 1322 aa0.57□□□□□ -2.32
NIP100YPL174C VPS3P23643 1011 aa0.57□□□□□ -2.32
NIP100YPL174C KRR1P25586 316 aaPredicted RBP0.57□□□□□ -2.32
NIP100YPL174C PRS4P38063 326 aaPredicted RBP0.57□□□□□ -2.32
NIP100YPL174C DSE2P38844 325 aa0.57□□□□□ -2.32
NIP100YPL174C FIS1P40515 155 aa0.57□□□□□ -2.32
NIP100YPL174C AKR2Q12013 749 aa0.57□□□□□ -2.32
NIP100YPL174C BEM2P39960 2167 aaKnown RBP0.57□□□□□ -2.32
NIP100YPL174C YPR117WQ06116 2489 aa0.57□□□□□ -2.32
NIP100YPL174C FRS2P15625 503 aaKnown RBP0.57□□□□□ -2.32
NIP100YPL174C TPM1P17536 199 aaKnown RBP0.57□□□□□ -2.32
NIP100YPL174C YHR022CP38763 256 aa0.57□□□□□ -2.32
NIP100YPL174C COA1P40452 197 aa0.57□□□□□ -2.32
NIP100YPL174C GCD14P46959 383 aaPredicted RBP0.57□□□□□ -2.32
NIP100YPL174C RHO3Q00245 231 aaKnown RBP0.57□□□□□ -2.32
NIP100YPL174C EGD1Q02642 157 aaKnown RBP0.57□□□□□ -2.32
NIP100YPL174C DCN1Q12395 269 aa0.57□□□□□ -2.32
NIP100YPL174C MSW1P04803 379 aa0.56□□□□□ -2.32
NIP100YPL174C COS2P0CX12 379 aa0.56□□□□□ -2.32
NIP100YPL174C COS3P0CX13 379 aa0.56□□□□□ -2.32
NIP100YPL174C SCL1P21243 252 aaKnown RBP0.56□□□□□ -2.32
NIP100YPL174C MEK1P24719 497 aaPredicted RBP0.56□□□□□ -2.32
NIP100YPL174C ERG24P32462 438 aaKnown RBP0.56□□□□□ -2.32
NIP100YPL174C YKL070WP36087 169 aa0.56□□□□□ -2.32
NIP100YPL174C PHO88P38264 188 aaPredicted RBP0.56□□□□□ -2.32
NIP100YPL174C YBR219CP38317 127 aa0.56□□□□□ -2.32
NIP100YPL174C DDI1P40087 428 aa0.56□□□□□ -2.32
NIP100YPL174C SWS2P53937 143 aa0.56□□□□□ -2.32
NIP100YPL174C ARV1Q06541 321 aa0.56□□□□□ -2.32
NIP100YPL174C YPL257WQ08974 193 aa0.56□□□□□ -2.32
NIP100YPL174C DSF1P0CX08 502 aa0.56□□□□□ -2.32
NIP100YPL174C YNR073CP0CX09 502 aa0.56□□□□□ -2.32
NIP100YPL174C FPR1P20081 114 aaKnown RBP0.56□□□□□ -2.32
NIP100YPL174C DAL80P26343 269 aa0.56□□□□□ -2.32
NIP100YPL174C ERV15P38312 142 aa0.56□□□□□ -2.32
NIP100YPL174C VPS45P38932 577 aa0.56□□□□□ -2.32
NIP100YPL174C SME1Q12330 94 aaPredicted RBP0.56□□□□□ -2.32
NIP100YPL174C MET5P47169 1442 aa0.56□□□□□ -2.32
NIP100YPL174C IPP1P00817 287 aaKnown RBP0.55□□□□□ -2.32
NIP100YPL174C MSA2P36157 363 aa0.55□□□□□ -2.32
NIP100YPL174C YER189WP40104 122 aa0.55□□□□□ -2.32
NIP100YPL174C NUP49Q02199 472 aa0.55□□□□□ -2.32
NIP100YPL174C RRS1Q08746 203 aaKnown RBP0.55□□□□□ -2.32
NIP100YPL174C Q0255P03881 472 aa0.55□□□□□ -2.32
NIP100YPL174C RPL24AP04449 155 aaKnown RBP0.55□□□□□ -2.32
NIP100YPL174C CDC7P06243 507 aa0.55□□□□□ -2.32
NIP100YPL174C AGE2P40529 298 aa0.55□□□□□ -2.32
NIP100YPL174C BTS1Q12051 335 aa0.55□□□□□ -2.32
NIP100YPL174C HSL1P34244 1518 aa0.54□□□□□ -2.32
NIP100YPL174C YKR104WP0CE69 306 aa0.54□□□□□ -2.32
NIP100YPL174C SSQ1Q05931 657 aaPredicted RBP0.54□□□□□ -2.32
NIP100YPL174C YPR098CQ06089 161 aa0.54□□□□□ -2.32
NIP100YPL174C ATG39Q06159 398 aa0.54□□□□□ -2.32
NIP100YPL174C LOA1Q06508 300 aa0.54□□□□□ -2.32
NIP100YPL174C GSC2P40989 1895 aa0.54□□□□□ -2.32
NIP100YPL174C YLR462WO13556 202 aa0.54□□□□□ -2.32
NIP100YPL174C RAS2P01120 322 aaKnown RBP0.54□□□□□ -2.32
NIP100YPL174C RPP0P05317 312 aaKnown RBP0.54□□□□□ -2.32
NIP100YPL174C SSA3P09435 649 aaKnown RBP0.54□□□□□ -2.32
NIP100YPL174C OAC1P32332 324 aa0.54□□□□□ -2.32
NIP100YPL174C QRI5P32344 111 aa0.54□□□□□ -2.32
NIP100YPL174C YEL075CP39972 122 aa0.54□□□□□ -2.32
NIP100YPL174C RMR1P53060 241 aa0.54□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms