RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W RMR1P53060 241 aa1.91□□□□□ -2.1
VPS16YPL045W LIF1P53150 421 aa1.91□□□□□ -2.1
VPS16YPL045W YET2Q04210 160 aa1.91□□□□□ -2.1
VPS16YPL045W ARC18Q05933 178 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W YPR098CQ06089 161 aa1.91□□□□□ -2.1
VPS16YPL045W IRC25Q07951 179 aa1.91□□□□□ -2.1
VPS16YPL045W COQ10Q08058 207 aa1.91□□□□□ -2.1
VPS16YPL045W ABP140Q08641 628 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W SNU23Q12368 194 aaPredicted RBP1.91□□□□□ -2.1
VPS16YPL045W FIG2P25653 1609 aa1.91□□□□□ -2.1
VPS16YPL045W HTB1P02293 131 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W HTB2P02294 131 aa1.91□□□□□ -2.1
VPS16YPL045W KSS1P14681 368 aa1.91□□□□□ -2.1
VPS16YPL045W CDC10P25342 322 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W YCR025CP25352 136 aa1.91□□□□□ -2.1
VPS16YPL045W ATG15P25641 520 aa1.91□□□□□ -2.1
VPS16YPL045W RFA3P26755 122 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W IDH1P28834 360 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
VPS16YPL045W FRM2P37261 193 aa1.91□□□□□ -2.1
VPS16YPL045W MRP21P38175 177 aa1.91□□□□□ -2.1
VPS16YPL045W STB1P42845 420 aa1.91□□□□□ -2.1
VPS16YPL045W NIF3P53081 288 aa1.91□□□□□ -2.1
VPS16YPL045W NOP19P53317 196 aaPredicted RBP1.91□□□□□ -2.1
VPS16YPL045W SDC1Q03323 175 aa1.91□□□□□ -2.1
VPS16YPL045W YMR114CQ04471 368 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W YMR317WQ04893 1140 aa1.91□□□□□ -2.1
VPS16YPL045W CDD1Q06549 142 aa1.91□□□□□ -2.1
VPS16YPL045W SRO7Q12038 1033 aa1.91□□□□□ -2.1
VPS16YPL045W RPL21BQ12672 160 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W GSC2P40989 1895 aa1.9□□□□□ -2.1
VPS16YPL045W ATP7P30902 174 aa1.9□□□□□ -2.11
VPS16YPL045W SPS19P32573 292 aaKnown RBP1.9□□□□□ -2.11
VPS16YPL045W YKL075CP36083 450 aa1.9□□□□□ -2.11
VPS16YPL045W HEK2P38199 381 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
VPS16YPL045W GOS1P38736 223 aa1.9□□□□□ -2.11
VPS16YPL045W WSC4P38739 605 aa1.9□□□□□ -2.11
VPS16YPL045W IKI1P38874 309 aa1.9□□□□□ -2.11
VPS16YPL045W AVT7P40501 490 aa1.9□□□□□ -2.11
VPS16YPL045W ALG13P53178 202 aa1.9□□□□□ -2.11
VPS16YPL045W DIA1P54005 336 aa1.9□□□□□ -2.11
VPS16YPL045W RMI1Q02685 241 aa1.9□□□□□ -2.11
VPS16YPL045W UTP15Q04305 513 aaKnown RBP1.9□□□□□ -2.11
VPS16YPL045W YDL144CQ07589 356 aa1.9□□□□□ -2.11
VPS16YPL045W VIK1Q12045 647 aa1.9□□□□□ -2.11
VPS16YPL045W QCR7P00128 127 aa1.9□□□□□ -2.11
VPS16YPL045W BGL2P15703 313 aaKnown RBP1.9□□□□□ -2.11
VPS16YPL045W AAT2P23542 418 aaKnown RBP1.9□□□□□ -2.11
VPS16YPL045W ARO2P28777 376 aaKnown RBP1.9□□□□□ -2.11
VPS16YPL045W SSO1P32867 290 aa1.9□□□□□ -2.11
VPS16YPL045W FZO1P38297 855 aa1.9□□□□□ -2.11
VPS16YPL045W MED8P38304 223 aa1.9□□□□□ -2.11
VPS16YPL045W TIM17P39515 158 aa1.9□□□□□ -2.11
VPS16YPL045W MIG3P39943 394 aa1.9□□□□□ -2.11
VPS16YPL045W PRE6P40303 254 aaKnown RBP1.9□□□□□ -2.11
VPS16YPL045W ADO1P47143 340 aaKnown RBP1.9□□□□□ -2.11
VPS16YPL045W MIC26P50087 233 aa1.9□□□□□ -2.11
VPS16YPL045W MGA1P53050 456 aa1.9□□□□□ -2.11
VPS16YPL045W COG7P53195 279 aa1.9□□□□□ -2.11
VPS16YPL045W GIM5Q04493 163 aa1.9□□□□□ -2.11
VPS16YPL045W FAR8Q05040 523 aa1.9□□□□□ -2.11
VPS16YPL045W MMT2Q08970 484 aa1.9□□□□□ -2.11
VPS16YPL045W YPL278CQ08990 100 aa1.9□□□□□ -2.11
VPS16YPL045W RFM1Q12192 310 aa1.9□□□□□ -2.11
VPS16YPL045W TAD3Q9URQ3 322 aa1.9□□□□□ -2.11
VPS16YPL045W ASP3-2P0CX77 362 aa1.89□□□□□ -2.11
VPS16YPL045W ASP3-3P0CX78 362 aa1.89□□□□□ -2.11
VPS16YPL045W ASP3-4P0CX79 362 aa1.89□□□□□ -2.11
VPS16YPL045W ASP3-1P0CZ17 362 aa1.89□□□□□ -2.11
VPS16YPL045W GDH2P33327 1092 aaKnown RBP1.89□□□□□ -2.11
VPS16YPL045W PRX1P34227 261 aaKnown RBP1.89□□□□□ -2.11
VPS16YPL045W SOL2P37262 315 aa1.89□□□□□ -2.11
VPS16YPL045W YHL049CP38722 271 aa1.89□□□□□ -2.11
VPS16YPL045W SEN34P39707 275 aa1.89□□□□□ -2.11
VPS16YPL045W ERG10P41338 398 aaKnown RBP1.89□□□□□ -2.11
VPS16YPL045W SNZ3P43545 298 aa1.89□□□□□ -2.11
VPS16YPL045W TRM9P49957 279 aa1.89□□□□□ -2.11
VPS16YPL045W GET1P53192 235 aa1.89□□□□□ -2.11
VPS16YPL045W SNZ2P53824 298 aa1.89□□□□□ -2.11
VPS16YPL045W YPL113CQ02961 396 aa1.89□□□□□ -2.11
VPS16YPL045W NDD1Q08887 554 aa1.89□□□□□ -2.11
VPS16YPL045W YLR126CQ12288 251 aa1.89□□□□□ -2.11
VPS16YPL045W JLP1Q12358 412 aa1.89□□□□□ -2.11
VPS16YPL045W DCN1Q12395 269 aa1.89□□□□□ -2.11
VPS16YPL045W RPL28P02406 149 aaKnown RBP1.88□□□□□ -2.11
VPS16YPL045W MRPL3P36516 390 aa1.88□□□□□ -2.11
VPS16YPL045W RFT1P38206 574 aaPredicted RBP1.88□□□□□ -2.11
VPS16YPL045W EGD2P38879 174 aaKnown RBP1.88□□□□□ -2.11
VPS16YPL045W KRE29P40026 464 aa1.88□□□□□ -2.11
VPS16YPL045W YIL001WP40560 513 aa1.88□□□□□ -2.11
VPS16YPL045W FMP48P53233 369 aa1.88□□□□□ -2.11
VPS16YPL045W BOR1P53838 576 aa1.88□□□□□ -2.11
VPS16YPL045W FMP41P53889 259 aaKnown RBP1.88□□□□□ -2.11
VPS16YPL045W RNH201P53942 307 aa1.88□□□□□ -2.11
VPS16YPL045W MRX11Q03079 207 aa1.88□□□□□ -2.11
VPS16YPL045W YDR115WQ04598 105 aa1.88□□□□□ -2.11
VPS16YPL045W ATG17Q06410 417 aa1.88□□□□□ -2.11
VPS16YPL045W GRE1Q08969 168 aa1.88□□□□□ -2.11
VPS16YPL045W YMR316C-AI2HB70 103 aa1.88□□□□□ -2.11
VPS16YPL045W SPT3P06844 337 aa1.88□□□□□ -2.11
VPS16YPL045W CAM1P29547 415 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms