RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	PMT2	P31382	759 aa		4.71	□□□□□ -1.66
NUP1	YOR098C	UTP30	P36144	274 aa	Known RBP	4.71	□□□□□ -1.66
NUP1	YOR098C	GIM4	P40005	111 aa	Known RBP	4.71	□□□□□ -1.66
NUP1	YOR098C	YFH7	P43591	353 aa		4.71	□□□□□ -1.66
NUP1	YOR098C	YGL235W	P53071	178 aa		4.71	□□□□□ -1.66
NUP1	YOR098C	PHO80	P20052	293 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	SPS18	P32572	300 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	TRM9	P49957	279 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	YPS5	P53057	165 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	MMS2	P53152	137 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	GOR1	P53839	350 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	IBD2	P53892	351 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	YLR152C	P54072	576 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	YLR112W	Q12130	139 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	RRP42	Q12277	265 aa	Predicted RBP	4.7	□□□□□ -1.66
NUP1	YOR098C	GPA2	P10823	449 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	GRX2	P17695	143 aa	Known RBP	4.7	□□□□□ -1.66
NUP1	YOR098C	HMT1	P38074	348 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	DER1	P38307	211 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
NUP1	YOR098C	YFL012W	P43580	148 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	AVT4	P50944	713 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	YNG1	Q08465	219 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	ZWF1	P11412	505 aa	Known RBP	4.7	□□□□□ -1.66
NUP1	YOR098C	PTC1	P35182	281 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	YCR087C-A	P37263	153 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	SHG1	P38337	142 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	RTS2	P40962	232 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	YNL234W	P53857	426 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	TRM44	Q02648	567 aa	Known RBP	4.7	□□□□□ -1.66
NUP1	YOR098C	DYN3	Q04949	312 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	HEM25	Q07534	307 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	DTD1	Q07648	150 aa	Known RBP	4.7	□□□□□ -1.66
NUP1	YOR098C	FLO11	P08640	1367 aa		4.7	□□□□□ -1.66
NUP1	YOR098C	FKS1	P38631	1876 aa	Known RBP	4.69	□□□□□ -1.66
NUP1	YOR098C	RPS3	P05750	240 aa	Known RBP	4.69	□□□□□ -1.66
NUP1	YOR098C	GLN3	P18494	730 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	YAP1	P19880	650 aa	Known RBP	4.69	□□□□□ -1.66
NUP1	YOR098C	HCM1	P25364	564 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	YKL075C	P36083	450 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	ECM13	P38195	257 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	MST28	P39552	234 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	RRT5	P43607	289 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	CWC25	P53854	179 aa	Known RBP	4.69	□□□□□ -1.66
NUP1	YOR098C	RSC9	Q03124	581 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	YML096W	Q04489	525 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	DXO1	Q06349	442 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	BI3	Q9ZZW7	517 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	FIG2	P25653	1609 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	NMT1	P14743	455 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	SAM2	P19358	384 aa	Known RBP	4.69	□□□□□ -1.66
NUP1	YOR098C	GLC7	P32598	312 aa	Known RBP	4.69	□□□□□ -1.66
NUP1	YOR098C	AVT2	P39981	480 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	SER33	P40510	469 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	MRPL49	P40858	161 aa	Predicted RBP	4.69	□□□□□ -1.66
NUP1	YOR098C	ATP16	Q12165	160 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	SNU23	Q12368	194 aa	Predicted RBP	4.69	□□□□□ -1.66
NUP1	YOR098C	YPL119C-A	Q3E751	87 aa		4.69	□□□□□ -1.66
NUP1	YOR098C	PPH21	P23594	369 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	SGE1	P33335	543 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	ALB1	P47019	175 aa	Predicted RBP	4.68	□□□□□ -1.66
NUP1	YOR098C	TPN1	P53099	579 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	GTR2	P53290	341 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	SWS2	P53937	143 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	HNT3	Q08702	217 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	YLR126C	Q12288	251 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	YCR024C-B	Q3E7Z8	88 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	DRE2	P36152	348 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	VMA7	P39111	118 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	KIN4	Q01919	800 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	TRM82	Q03774	444 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	YPR098C	Q06089	161 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	RIF2	Q06208	395 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	IRC10	Q08118	586 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	RRS1	Q08746	203 aa	Known RBP	4.68	□□□□□ -1.66
NUP1	YOR098C	USB1	Q12208	290 aa	Known RBP	4.68	□□□□□ -1.66
NUP1	YOR098C	PDC2	P32896	925 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	CSG2	P35206	410 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	MTC6	P38849	526 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	KRE29	P40026	464 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	PRM10	P42946	383 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	SBH2	P52871	88 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	NSA1	P53136	463 aa	Predicted RBP	4.68	□□□□□ -1.66
NUP1	YOR098C	POP6	P53218	158 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	NRK1	P53915	240 aa		4.68	□□□□□ -1.66
NUP1	YOR098C	BCY1	P07278	416 aa	Known RBP	4.67	□□□□□ -1.66
NUP1	YOR098C	ERD1	P16151	362 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	UBC8	P28263	218 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	CAF4	P36130	643 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	YBR137W	P38276	179 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	AIM23	P47015	356 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	YNR066C	P53752	436 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	YPL199C	Q08954	240 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	PHA2	P32452	334 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	YIL054W	P40524	105 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	CPR7	P47103	393 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	TDA7	P53882	636 aa	Predicted RBP	4.67	□□□□□ -1.66
NUP1	YOR098C	DPP1	Q05521	289 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	MUM3	Q08750	479 aa		4.67	□□□□□ -1.66
NUP1	YOR098C	MMT2	Q08970	484 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 145.4 ms