RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	TRX3	P25372	127 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	ACB1	P31787	87 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	MUD1	P32605	298 aa	Known RBP	2.99	□□□□□ -1.93
VAM10	YOR068C	TRM7	P38238	310 aa	Known RBP	2.99	□□□□□ -1.93
VAM10	YOR068C	COS8	P38723	381 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	IPI1	P38803	334 aa	Predicted RBP	2.99	□□□□□ -1.93
VAM10	YOR068C	CHL4	P38907	458 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	YER076C	P40049	302 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	DIM1	P41819	318 aa	Known RBP	2.99	□□□□□ -1.93
VAM10	YOR068C	BIR1	P47134	954 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	ALG13	P53178	202 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	CDH1	P53197	566 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	COS1	P53822	381 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	YKR005C	Q02203	525 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	YMR315W	Q04869	349 aa	Known RBP	2.99	□□□□□ -1.93
VAM10	YOR068C	CTR3	Q06686	241 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	SKI7	Q08491	747 aa	Predicted RBP	2.99	□□□□□ -1.93
VAM10	YOR068C	YOR283W	Q12040	230 aa	Known RBP	2.99	□□□□□ -1.93
VAM10	YOR068C	YCT1	Q12235	531 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	ATG34	Q12292	412 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	GEP5	Q12393	293 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	PEX11	Q12462	236 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	IZH4	Q99393	312 aa		2.99	□□□□□ -1.93
VAM10	YOR068C	PHO2	P07269	559 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	YCR023C	P25351	611 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	LSB5	P25369	354 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	MXR2	P25566	168 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	RPC19	P28000	142 aa	Known RBP	2.98	□□□□□ -1.93
VAM10	YOR068C	UGX2	P32772	223 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	COX13	P32799	129 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	SKN1	P33336	771 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	PTC1	P35182	281 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	YBR220C	P38318	560 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	YAL037W	P39728	267 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	GLE2	P40066	365 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	YPS6	P40583	537 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	MEP2	P41948	499 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	FAR7	P43592	221 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	MIC19	P43594	170 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	ERJ5	P43613	295 aa	Predicted RBP	2.98	□□□□□ -1.93
VAM10	YOR068C	CTK3	P46963	296 aa	Predicted RBP	2.98	□□□□□ -1.93
VAM10	YOR068C	IKS1	P47042	667 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	YJR012C	P47087	207 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	YJR079W	P47126	109 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	MKC7	P53379	596 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	FRE4	P53746	719 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	YNL095C	P53932	642 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	YPL077C	Q02831	240 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	ODC1	Q03028	310 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	YDR249C	Q03787	373 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	HNT1	Q04344	158 aa	Known RBP	2.98	□□□□□ -1.93
VAM10	YOR068C	YML096W	Q04489	525 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	NAT4	Q04751	285 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	GAS2	Q06135	555 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	PEX30	Q06169	523 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	YLR030W	Q07967	263 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	TRM10	Q12400	293 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	RIB3	Q99258	208 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	SPP41	P38904	1435 aa		2.98	□□□□□ -1.93
VAM10	YOR068C	TPK3	P05986	398 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	RPL20A	P0CX23	172 aa	Known RBP	2.97	□□□□□ -1.93
VAM10	YOR068C	RPL20B	P0CX24	172 aa	Predicted RBP	2.97	□□□□□ -1.93
VAM10	YOR068C	MRS3	P10566	314 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	YCR102C	P25608	368 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	PMT2	P31382	759 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	RNP1	P32385	249 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	ZRT1	P32804	376 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	MRPL6	P32904	214 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	SFC1	P33303	322 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	SIP2	P34164	415 aa	Known RBP	2.97	□□□□□ -1.93
VAM10	YOR068C	PAN3	P36102	679 aa	Predicted RBP	2.97	□□□□□ -1.93
VAM10	YOR068C	SOL2	P37262	315 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	YBR285W	P38354	144 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	YMR144W	P40214	342 aa	Known RBP	2.97	□□□□□ -1.93
VAM10	YOR068C	GWT1	P47026	490 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	CPR7	P47103	393 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	RPS12	P48589	143 aa	Known RBP	2.97	□□□□□ -1.93
VAM10	YOR068C	AIF1	P52923	378 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	SWC4	P53201	476 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	PEX31	P53203	462 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	TIM13	P53299	105 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	GPI15	P53961	229 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	ASI3	P53983	676 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	TIM8	P57744	87 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	ACT1	P60010	375 aa	Known RBP	2.97	□□□□□ -1.93
VAM10	YOR068C	TMA23	Q03525	211 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	SEC13	Q04491	297 aa	Known RBP	2.97	□□□□□ -1.93
VAM10	YOR068C	TAF9	Q05027	157 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	SEI1	Q06058	285 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	RRS1	Q08746	203 aa	Known RBP	2.97	□□□□□ -1.93
VAM10	YOR068C	TIM18	Q08749	192 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	FSF1	Q12029	327 aa	Known RBP	2.97	□□□□□ -1.93
VAM10	YOR068C	RAX2	Q12465	1220 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	SAS5	Q99314	248 aa		2.97	□□□□□ -1.93
VAM10	YOR068C	POM152	P39685	1337 aa		2.96	□□□□□ -1.93
VAM10	YOR068C	BUD4	P47136	1447 aa		2.96	□□□□□ -1.94
VAM10	YOR068C	ARF1	P11076	181 aa	Known RBP	2.96	□□□□□ -1.94
VAM10	YOR068C	MTF1	P14908	341 aa	Known RBP	2.96	□□□□□ -1.94
VAM10	YOR068C	ARF2	P19146	181 aa	Known RBP	2.96	□□□□□ -1.94
VAM10	YOR068C	ATG22	P25568	528 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms