RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W MRPL51Q06090 140 aaPredicted RBP3.34□□□□□ -1.88
ROD1YOR018W YTH1Q06102 208 aaPredicted RBP3.34□□□□□ -1.88
ROD1YOR018W GPN3Q06543 272 aa3.34□□□□□ -1.88
ROD1YOR018W TSR2Q06672 205 aaKnown RBP3.34□□□□□ -1.88
ROD1YOR018W YDL218WQ07629 317 aa3.34□□□□□ -1.88
ROD1YOR018W RPL7BQ12213 244 aaKnown RBP3.34□□□□□ -1.88
ROD1YOR018W YOR032W-AQ8TGS1 66 aa3.34□□□□□ -1.88
ROD1YOR018W CYC1P00044 109 aaPredicted RBP3.33□□□□□ -1.88
ROD1YOR018W CDC31P06704 161 aaKnown RBP3.33□□□□□ -1.88
ROD1YOR018W DBF20P32328 564 aa3.33□□□□□ -1.88
ROD1YOR018W SSH1P38353 490 aaKnown RBP3.33□□□□□ -1.88
ROD1YOR018W YFL051CP43552 160 aa3.33□□□□□ -1.88
ROD1YOR018W PCP1P53259 346 aa3.33□□□□□ -1.88
ROD1YOR018W MRPL13Q02204 264 aa3.33□□□□□ -1.88
ROD1YOR018W NRG1Q03125 231 aa3.33□□□□□ -1.88
ROD1YOR018W GAS2Q06135 555 aa3.33□□□□□ -1.88
ROD1YOR018W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
ROD1YOR018W MES1P00958 751 aaKnown RBP3.33□□□□□ -1.88
ROD1YOR018W UTR1P21373 530 aa3.33□□□□□ -1.88
ROD1YOR018W SEC62P21825 274 aa3.33□□□□□ -1.88
ROD1YOR018W MAK32P23060 363 aa3.33□□□□□ -1.88
ROD1YOR018W ARO4P32449 370 aaKnown RBP3.33□□□□□ -1.88
ROD1YOR018W YER084WP40057 128 aa3.33□□□□□ -1.88
ROD1YOR018W YPL077CQ02831 240 aa3.33□□□□□ -1.88
ROD1YOR018W YAP6Q03935 383 aa3.33□□□□□ -1.88
ROD1YOR018W KEI1Q06346 221 aa3.33□□□□□ -1.88
ROD1YOR018W PHO92Q06390 306 aa3.33□□□□□ -1.88
ROD1YOR018W NIP7Q08962 181 aaKnown RBP3.33□□□□□ -1.88
ROD1YOR018W GRE1Q08969 168 aa3.33□□□□□ -1.88
ROD1YOR018W ERP4Q12450 207 aa3.33□□□□□ -1.88
ROD1YOR018W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
ROD1YOR018W ODC2Q99297 307 aa3.33□□□□□ -1.88
ROD1YOR018W CBP6P07253 162 aaPredicted RBP3.32□□□□□ -1.88
ROD1YOR018W YLL053CP0CD98 152 aa3.32□□□□□ -1.88
ROD1YOR018W ARO3P14843 370 aaKnown RBP3.32□□□□□ -1.88
ROD1YOR018W STE50P25344 346 aa3.32□□□□□ -1.88
ROD1YOR018W PET18P25362 215 aa3.32□□□□□ -1.88
ROD1YOR018W ATG22P25568 528 aa3.32□□□□□ -1.88
ROD1YOR018W VPS17P32913 551 aa3.32□□□□□ -1.88
ROD1YOR018W OTU1P43558 301 aa3.32□□□□□ -1.88
ROD1YOR018W CTK2P46962 323 aa3.32□□□□□ -1.88
ROD1YOR018W YJL055WP47044 245 aa3.32□□□□□ -1.88
ROD1YOR018W YGL204CP53089 101 aa3.32□□□□□ -1.88
ROD1YOR018W OKP1P53298 406 aa3.32□□□□□ -1.88
ROD1YOR018W SRL4Q03085 281 aa3.32□□□□□ -1.88
ROD1YOR018W YDR114CQ04597 100 aa3.32□□□□□ -1.88
ROD1YOR018W RAF1Q06891 181 aa3.32□□□□□ -1.88
ROD1YOR018W CYC7P00045 113 aa3.32□□□□□ -1.88
ROD1YOR018W IPP1P00817 287 aaKnown RBP3.32□□□□□ -1.88
ROD1YOR018W REP2P03872 296 aa3.32□□□□□ -1.88
ROD1YOR018W RAD52P06778 471 aaKnown RBP3.32□□□□□ -1.88
ROD1YOR018W VAM7P32912 316 aa3.32□□□□□ -1.88
ROD1YOR018W FMP23P38231 175 aa3.32□□□□□ -1.88
ROD1YOR018W MLH1P38920 769 aa3.32□□□□□ -1.88
ROD1YOR018W RTT105P40063 208 aa3.32□□□□□ -1.88
ROD1YOR018W DLS1P40366 167 aa3.32□□□□□ -1.88
ROD1YOR018W FLX1P40464 311 aa3.32□□□□□ -1.88
ROD1YOR018W SEC24P40482 926 aaKnown RBP3.32□□□□□ -1.88
ROD1YOR018W LOH1P47055 219 aa3.32□□□□□ -1.88
ROD1YOR018W YJL016WP47072 561 aa3.32□□□□□ -1.88
ROD1YOR018W CCC1P47818 322 aa3.32□□□□□ -1.88
ROD1YOR018W AAH1P53909 347 aa3.32□□□□□ -1.88
ROD1YOR018W RNH201P53942 307 aa3.32□□□□□ -1.88
ROD1YOR018W SPC19Q03954 165 aa3.32□□□□□ -1.88
ROD1YOR018W API2Q04413 109 aa3.32□□□□□ -1.88
ROD1YOR018W FIT3Q08907 204 aa3.32□□□□□ -1.88
ROD1YOR018W YDL180WQ12301 547 aa3.32□□□□□ -1.88
ROD1YOR018W COX9P07255 59 aa3.31□□□□□ -1.88
ROD1YOR018W DSF1P0CX08 502 aa3.31□□□□□ -1.88
ROD1YOR018W YNR073CP0CX09 502 aa3.31□□□□□ -1.88
ROD1YOR018W CAP2P13517 287 aa3.31□□□□□ -1.88
ROD1YOR018W MSI1P13712 422 aa3.31□□□□□ -1.88
ROD1YOR018W YBL010CP32788 280 aa3.31□□□□□ -1.88
ROD1YOR018W YND1P40009 630 aa3.31□□□□□ -1.88
ROD1YOR018W ERJ5P43613 295 aaPredicted RBP3.31□□□□□ -1.88
ROD1YOR018W BXI1P48558 297 aa3.31□□□□□ -1.88
ROD1YOR018W POP6P53218 158 aa3.31□□□□□ -1.88
ROD1YOR018W LSM7P53905 115 aaKnown RBP3.31□□□□□ -1.88
ROD1YOR018W MOT3P54785 490 aaKnown RBP3.31□□□□□ -1.88
ROD1YOR018W APM1Q00776 475 aaPredicted RBP3.31□□□□□ -1.88
ROD1YOR018W RCF1Q03713 159 aa3.31□□□□□ -1.88
ROD1YOR018W HNT3Q08702 217 aa3.31□□□□□ -1.88
ROD1YOR018W YPL199CQ08954 240 aa3.31□□□□□ -1.88
ROD1YOR018W FEX2Q08991 375 aa3.31□□□□□ -1.88
ROD1YOR018W RTC5Q12108 567 aaKnown RBP3.31□□□□□ -1.88
ROD1YOR018W HUT1Q12520 339 aa3.31□□□□□ -1.88
ROD1YOR018W HTZ1Q12692 134 aaKnown RBP3.31□□□□□ -1.88
ROD1YOR018W MSW1P04803 379 aa3.31□□□□□ -1.88
ROD1YOR018W ITR1P30605 584 aa3.31□□□□□ -1.88
ROD1YOR018W MBA1P38300 278 aa3.31□□□□□ -1.88
ROD1YOR018W UBX6P47049 396 aa3.31□□□□□ -1.88
ROD1YOR018W PUS4P48567 403 aaKnown RBP3.31□□□□□ -1.88
ROD1YOR018W SUR7P54003 302 aa3.31□□□□□ -1.88
ROD1YOR018W YLR152CP54072 576 aa3.31□□□□□ -1.88
ROD1YOR018W RPL6AQ02326 176 aaKnown RBP3.31□□□□□ -1.88
ROD1YOR018W RVB1Q03940 463 aaKnown RBP3.31□□□□□ -1.88
ROD1YOR018W RGC1Q06108 1083 aaKnown RBP3.31□□□□□ -1.88
ROD1YOR018W YLR031WQ07978 186 aa3.31□□□□□ -1.88
ROD1YOR018W ISA2Q12425 185 aa3.31□□□□□ -1.88
ROD1YOR018W PET54P10834 293 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms