RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W YPS5P53057 165 aa2.71□□□□□ -1.98
UBP8YMR223W TOS8P53147 276 aa2.71□□□□□ -1.98
UBP8YMR223W IGO1P53897 168 aa2.71□□□□□ -1.98
UBP8YMR223W ABF2Q02486 183 aa2.71□□□□□ -1.98
UBP8YMR223W AIM34Q03673 198 aa2.71□□□□□ -1.98
UBP8YMR223W HEM25Q07534 307 aa2.71□□□□□ -1.98
UBP8YMR223W SNX3Q08826 162 aaKnown RBP2.71□□□□□ -1.98
UBP8YMR223W MMT2Q08970 484 aa2.71□□□□□ -1.98
UBP8YMR223W YLR126CQ12288 251 aa2.71□□□□□ -1.98
UBP8YMR223W SME1Q12330 94 aaPredicted RBP2.71□□□□□ -1.98
UBP8YMR223W RDI1Q12434 202 aa2.71□□□□□ -1.98
UBP8YMR223W BCY1P07278 416 aaKnown RBP2.7□□□□□ -1.98
UBP8YMR223W NHP6AP11632 93 aaKnown RBP2.7□□□□□ -1.98
UBP8YMR223W CTA1P15202 515 aa2.7□□□□□ -1.98
UBP8YMR223W GRX2P17695 143 aaKnown RBP2.7□□□□□ -1.98
UBP8YMR223W EXG1P23776 448 aaKnown RBP2.7□□□□□ -1.98
UBP8YMR223W TIR2P33890 251 aa2.7□□□□□ -1.98
UBP8YMR223W SRY1P36007 326 aa2.7□□□□□ -1.98
UBP8YMR223W WSC4P38739 605 aa2.7□□□□□ -1.98
UBP8YMR223W KRE29P40026 464 aa2.7□□□□□ -1.98
UBP8YMR223W DFG10P40526 253 aa2.7□□□□□ -1.98
UBP8YMR223W YIA6P40556 373 aa2.7□□□□□ -1.98
UBP8YMR223W PMT4P46971 762 aa2.7□□□□□ -1.98
UBP8YMR223W AIM23P47015 356 aa2.7□□□□□ -1.98
UBP8YMR223W IRC18P47056 224 aa2.7□□□□□ -1.98
UBP8YMR223W YJR030CP47101 745 aa2.7□□□□□ -1.98
UBP8YMR223W BRR6P53062 197 aa2.7□□□□□ -1.98
UBP8YMR223W VHT1P53241 593 aa2.7□□□□□ -1.98
UBP8YMR223W SYF2P53277 215 aaPredicted RBP2.7□□□□□ -1.98
UBP8YMR223W MPA43P53583 542 aaPredicted RBP2.7□□□□□ -1.98
UBP8YMR223W PDR17P53844 350 aa2.7□□□□□ -1.98
UBP8YMR223W SWS2P53937 143 aa2.7□□□□□ -1.98
UBP8YMR223W YLR012CQ07927 99 aa2.7□□□□□ -1.98
UBP8YMR223W YLR050CQ12155 161 aaKnown RBP2.7□□□□□ -1.98
UBP8YMR223W YPL119C-AQ3E751 87 aa2.7□□□□□ -1.98
UBP8YMR223W RIB3Q99258 208 aa2.7□□□□□ -1.98
UBP8YMR223W Q0144Q9ZZW2 109 aa2.7□□□□□ -1.98
UBP8YMR223W POM152P39685 1337 aa2.69□□□□□ -1.98
UBP8YMR223W REP1P03871 373 aa2.69□□□□□ -1.98
UBP8YMR223W CYC3P06182 269 aa2.69□□□□□ -1.98
UBP8YMR223W CAP2P13517 287 aa2.69□□□□□ -1.98
UBP8YMR223W SEC22P22214 214 aa2.69□□□□□ -1.98
UBP8YMR223W YCR101CP25607 182 aa2.69□□□□□ -1.98
UBP8YMR223W HSP30P25619 332 aa2.69□□□□□ -1.98
UBP8YMR223W RPL16BP26785 198 aaKnown RBP2.69□□□□□ -1.98
UBP8YMR223W RPS1AP33442 255 aaKnown RBP2.69□□□□□ -1.98
UBP8YMR223W MRPL28P36527 147 aa2.69□□□□□ -1.98
UBP8YMR223W FRM2P37261 193 aa2.69□□□□□ -1.98
UBP8YMR223W MRPS9P38120 278 aa2.69□□□□□ -1.98
UBP8YMR223W TRM7P38238 310 aaKnown RBP2.69□□□□□ -1.98
UBP8YMR223W ECM33P38248 429 aaKnown RBP2.69□□□□□ -1.98
UBP8YMR223W MED8P38304 223 aa2.69□□□□□ -1.98
UBP8YMR223W SLM6P38343 150 aa2.69□□□□□ -1.98
UBP8YMR223W SER33P40510 469 aa2.69□□□□□ -1.98
UBP8YMR223W YIL029CP40538 142 aa2.69□□□□□ -1.98
UBP8YMR223W UFE1P41834 346 aa2.69□□□□□ -1.98
UBP8YMR223W DYN3Q04949 312 aa2.69□□□□□ -1.98
UBP8YMR223W DPP1Q05521 289 aa2.69□□□□□ -1.98
UBP8YMR223W LOA1Q06508 300 aa2.69□□□□□ -1.98
UBP8YMR223W RRS1Q08746 203 aaKnown RBP2.69□□□□□ -1.98
UBP8YMR223W TPO4Q12256 659 aa2.69□□□□□ -1.98
UBP8YMR223W UTP23Q12339 254 aaKnown RBP2.69□□□□□ -1.98
UBP8YMR223W FOL3Q12676 427 aaPredicted RBP2.69□□□□□ -1.98
UBP8YMR223W WIP1Q2V2P8 89 aa2.69□□□□□ -1.98
UBP8YMR223W SNT2P53127 1403 aa2.69□□□□□ -1.98
UBP8YMR223W DNA2P38859 1522 aa2.69□□□□□ -1.98
UBP8YMR223W SPT3P06844 337 aa2.68□□□□□ -1.98
UBP8YMR223W IDP1P21954 428 aaKnown RBP2.68□□□□□ -1.98
UBP8YMR223W IFM1P25038 676 aa2.68□□□□□ -1.98
UBP8YMR223W YEF1P32622 495 aa2.68□□□□□ -1.98
UBP8YMR223W YBR062CP38239 180 aa2.68□□□□□ -1.98
UBP8YMR223W CCC1P47818 322 aa2.68□□□□□ -1.98
UBP8YMR223W SWC4P53201 476 aa2.68□□□□□ -1.98
UBP8YMR223W COS6P53344 381 aa2.68□□□□□ -1.98
UBP8YMR223W FYV6P53913 173 aa2.68□□□□□ -1.98
UBP8YMR223W RHO3Q00245 231 aaKnown RBP2.68□□□□□ -1.98
UBP8YMR223W DYN2Q02647 92 aa2.68□□□□□ -1.98
UBP8YMR223W BCH1Q05029 724 aa2.68□□□□□ -1.98
UBP8YMR223W YLR031WQ07978 186 aa2.68□□□□□ -1.98
UBP8YMR223W COQ10Q08058 207 aa2.68□□□□□ -1.98
UBP8YMR223W RDL2Q08742 149 aaKnown RBP2.68□□□□□ -1.98
UBP8YMR223W AKR2Q12013 749 aa2.68□□□□□ -1.98
UBP8YMR223W BBP1Q12365 385 aa2.68□□□□□ -1.98
UBP8YMR223W SNU23Q12368 194 aaPredicted RBP2.68□□□□□ -1.98
UBP8YMR223W MRX4Q12467 430 aa2.68□□□□□ -1.98
UBP8YMR223W BI3Q9ZZW7 517 aa2.68□□□□□ -1.98
UBP8YMR223W YOR1P53049 1477 aa2.68□□□□□ -1.98
UBP8YMR223W TOP2P06786 1428 aaKnown RBP2.68□□□□□ -1.98
UBP8YMR223W CDC8P00572 216 aa2.68□□□□□ -1.98
UBP8YMR223W MET2P08465 486 aa2.68□□□□□ -1.98
UBP8YMR223W TRX3P25372 127 aa2.68□□□□□ -1.98
UBP8YMR223W ARO7P32178 256 aa2.68□□□□□ -1.98
UBP8YMR223W OAC1P32332 324 aa2.68□□□□□ -1.98
UBP8YMR223W MRPL3P36516 390 aa2.68□□□□□ -1.98
UBP8YMR223W PRS3P38689 320 aaKnown RBP2.68□□□□□ -1.98
UBP8YMR223W HPM1P40481 377 aa2.68□□□□□ -1.98
UBP8YMR223W TPN1P53099 579 aa2.68□□□□□ -1.98
UBP8YMR223W HSK3P69852 69 aa2.68□□□□□ -1.98
UBP8YMR223W TRM44Q02648 567 aaKnown RBP2.68□□□□□ -1.98
UBP8YMR223W PET191Q02772 108 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 100.9 ms