RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W MET17P06106 444 aa6.41□□□□□ -1.38
NUP53YMR153W ADK1P07170 222 aaKnown RBP6.41□□□□□ -1.38
NUP53YMR153W COX9P07255 59 aa6.41□□□□□ -1.38
NUP53YMR153W IES6P32617 166 aa6.41□□□□□ -1.38
NUP53YMR153W MKS1P34072 584 aa6.41□□□□□ -1.38
NUP53YMR153W ZRT3P34240 503 aa6.41□□□□□ -1.38
NUP53YMR153W RCN1P36054 211 aa6.41□□□□□ -1.38
NUP53YMR153W OSH7P38755 437 aa6.41□□□□□ -1.38
NUP53YMR153W RIO2P40160 425 aaKnown RBP6.41□□□□□ -1.38
NUP53YMR153W YGL204CP53089 101 aa6.41□□□□□ -1.38
NUP53YMR153W POP6P53218 158 aa6.41□□□□□ -1.38
NUP53YMR153W YMR254CQ04838 102 aa6.41□□□□□ -1.38
NUP53YMR153W YLR283WQ05867 314 aa6.41□□□□□ -1.38
NUP53YMR153W MSA1Q08471 629 aa6.41□□□□□ -1.38
NUP53YMR153W EAF3Q12432 401 aa6.41□□□□□ -1.38
NUP53YMR153W REP2P03872 296 aa6.4□□□□□ -1.39
NUP53YMR153W GCD1P09032 578 aaPredicted RBP6.4□□□□□ -1.39
NUP53YMR153W SPS4P09937 338 aa6.4□□□□□ -1.39
NUP53YMR153W AVT6P40074 448 aa6.4□□□□□ -1.39
NUP53YMR153W MRH4P53166 561 aa6.4□□□□□ -1.39
NUP53YMR153W MAK3Q03503 176 aa6.4□□□□□ -1.39
NUP53YMR153W SPR28Q04921 423 aa6.4□□□□□ -1.39
NUP53YMR153W NEJ1Q06148 342 aa6.4□□□□□ -1.39
NUP53YMR153W HEM25Q07534 307 aa6.4□□□□□ -1.39
NUP53YMR153W RBD2Q12270 262 aa6.4□□□□□ -1.39
NUP53YMR153W YLR099W-AQ3E798 87 aa6.4□□□□□ -1.39
NUP53YMR153W RPL25P04456 142 aaKnown RBP6.39□□□□□ -1.39
NUP53YMR153W SIR2P06700 562 aa6.39□□□□□ -1.39
NUP53YMR153W AHC2P25649 128 aa6.39□□□□□ -1.39
NUP53YMR153W DOA4P32571 926 aa6.39□□□□□ -1.39
NUP53YMR153W TCA17P32613 152 aa6.39□□□□□ -1.39
NUP53YMR153W BCK2P33306 851 aa6.39□□□□□ -1.39
NUP53YMR153W UFD1P53044 361 aa6.39□□□□□ -1.39
NUP53YMR153W UTP15Q04305 513 aaKnown RBP6.39□□□□□ -1.39
NUP53YMR153W YMR317WQ04893 1140 aa6.39□□□□□ -1.39
NUP53YMR153W MRX9Q07349 420 aaKnown RBP6.39□□□□□ -1.39
NUP53YMR153W GRC3Q07845 632 aa6.39□□□□□ -1.39
NUP53YMR153W YOR029WQ12243 111 aa6.39□□□□□ -1.39
NUP53YMR153W HUT1Q12520 339 aa6.39□□□□□ -1.39
NUP53YMR153W HXT2P23585 541 aa6.38□□□□□ -1.39
NUP53YMR153W SNC2P33328 115 aa6.38□□□□□ -1.39
NUP53YMR153W WSC2P53832 503 aa6.38□□□□□ -1.39
NUP53YMR153W PRP3Q03338 469 aaPredicted RBP6.38□□□□□ -1.39
NUP53YMR153W ORT1Q12375 292 aa6.38□□□□□ -1.39
NUP53YMR153W YMR105W-AQ8TGS8 64 aa6.38□□□□□ -1.39
NUP53YMR153W YEL009C-AA0A023PZF2 135 aa6.37□□□□□ -1.39
NUP53YMR153W MATALPHA1P0CY06 175 aa6.37□□□□□ -1.39
NUP53YMR153W HMLALPHA1P0CY07 175 aa6.37□□□□□ -1.39
NUP53YMR153W PRE7P23724 241 aaKnown RBP6.37□□□□□ -1.39
NUP53YMR153W PAU2P32612 120 aa6.37□□□□□ -1.39
NUP53YMR153W GVP36P40531 326 aaKnown RBP6.37□□□□□ -1.39
NUP53YMR153W PIR5P46999 287 aa6.37□□□□□ -1.39
NUP53YMR153W SSN8P47821 323 aa6.37□□□□□ -1.39
NUP53YMR153W DYN1P36022 4092 aa6.37□□□□□ -1.39
NUP53YMR153W CDC28P00546 298 aaKnown RBP6.36□□□□□ -1.39
NUP53YMR153W CDC31P06704 161 aaKnown RBP6.36□□□□□ -1.39
NUP53YMR153W PET122P10355 254 aa6.36□□□□□ -1.39
NUP53YMR153W IMP1P28627 190 aa6.36□□□□□ -1.39
NUP53YMR153W YBL010CP32788 280 aa6.36□□□□□ -1.39
NUP53YMR153W TMA19P35691 167 aaKnown RBP6.36□□□□□ -1.39
NUP53YMR153W SFK1P35735 353 aa6.36□□□□□ -1.39
NUP53YMR153W PIC2P40035 300 aa6.36□□□□□ -1.39
NUP53YMR153W SUT1P53032 299 aaKnown RBP6.36□□□□□ -1.39
NUP53YMR153W SCW4P53334 386 aaKnown RBP6.36□□□□□ -1.39
NUP53YMR153W YOR186WQ08560 144 aa6.36□□□□□ -1.39
NUP53YMR153W MPD1Q12404 318 aaKnown RBP6.36□□□□□ -1.39
NUP53YMR153W ARO7P32178 256 aa6.35□□□□□ -1.39
NUP53YMR153W ACH1P32316 526 aa6.35□□□□□ -1.39
NUP53YMR153W EFM3P47163 339 aa6.35□□□□□ -1.39
NUP53YMR153W XPT1P47165 209 aa6.35□□□□□ -1.39
NUP53YMR153W RRP17Q04031 235 aaPredicted RBP6.35□□□□□ -1.39
NUP53YMR153W LIP2Q06005 328 aa6.35□□□□□ -1.39
NUP53YMR153W ATG17Q06410 417 aa6.35□□□□□ -1.39
NUP53YMR153W TIR4Q12218 487 aaPredicted RBP6.35□□□□□ -1.39
NUP53YMR153W GCN4P03069 281 aa6.34□□□□□ -1.39
NUP53YMR153W VMA6P32366 345 aaKnown RBP6.34□□□□□ -1.39
NUP53YMR153W ERG24P32462 438 aaKnown RBP6.34□□□□□ -1.39
NUP53YMR153W MTC7P32633 139 aa6.34□□□□□ -1.39
NUP53YMR153W YKL063CP35725 167 aa6.34□□□□□ -1.39
NUP53YMR153W UMP1P38293 148 aa6.34□□□□□ -1.39
NUP53YMR153W SOL3P38858 249 aa6.34□□□□□ -1.39
NUP53YMR153W LNP1P38878 278 aa6.34□□□□□ -1.39
NUP53YMR153W AIM46P38885 310 aa6.34□□□□□ -1.39
NUP53YMR153W MRX5P47007 382 aa6.34□□□□□ -1.39
NUP53YMR153W DOC1P53068 250 aa6.34□□□□□ -1.39
NUP53YMR153W RFM1Q12192 310 aa6.34□□□□□ -1.39
NUP53YMR153W PHO4P07270 312 aaKnown RBP6.33□□□□□ -1.4
NUP53YMR153W SHE2P36068 246 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
NUP53YMR153W ALG14P38242 237 aa6.33□□□□□ -1.4
NUP53YMR153W BUD8P41698 603 aa6.33□□□□□ -1.4
NUP53YMR153W MID1P41821 548 aa6.33□□□□□ -1.4
NUP53YMR153W YAE1P47118 141 aaPredicted RBP6.33□□□□□ -1.4
NUP53YMR153W YPL108WQ02872 168 aaPredicted RBP6.33□□□□□ -1.4
NUP53YMR153W UPS1Q05776 175 aa6.33□□□□□ -1.4
NUP53YMR153W SRL1Q08673 210 aa6.33□□□□□ -1.4
NUP53YMR153W FUR4P05316 633 aaKnown RBP6.33□□□□□ -1.4
NUP53YMR153W GDH1P07262 454 aaKnown RBP6.33□□□□□ -1.4
NUP53YMR153W ATP10P18496 279 aa6.33□□□□□ -1.4
NUP53YMR153W CNE1P27825 502 aa6.33□□□□□ -1.4
NUP53YMR153W YKL102CP34249 101 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms