RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W YKR104WP0CE69 306 aa2.7□□□□□ -1.98
SPO20YMR017W SEC22P22214 214 aa2.7□□□□□ -1.98
SPO20YMR017W RNA15P25299 296 aaPredicted RBP2.7□□□□□ -1.98
SPO20YMR017W CTF19Q02732 369 aa2.7□□□□□ -1.98
SPO20YMR017W YDR124WQ04608 324 aa2.7□□□□□ -1.98
SPO20YMR017W YPR098CQ06089 161 aa2.7□□□□□ -1.98
SPO20YMR017W COQ10Q08058 207 aa2.7□□□□□ -1.98
SPO20YMR017W SSH1P38353 490 aaKnown RBP2.69□□□□□ -1.98
SPO20YMR017W TIF34P40217 347 aaKnown RBP2.69□□□□□ -1.98
SPO20YMR017W SNZ3P43545 298 aa2.69□□□□□ -1.98
SPO20YMR017W BNA6P43619 295 aa2.69□□□□□ -1.98
SPO20YMR017W MNN5P46982 586 aa2.69□□□□□ -1.98
SPO20YMR017W USE1P53146 245 aa2.69□□□□□ -1.98
SPO20YMR017W MRH4P53166 561 aa2.69□□□□□ -1.98
SPO20YMR017W SLM2P53955 656 aa2.69□□□□□ -1.98
SPO20YMR017W PEX12Q04370 399 aa2.69□□□□□ -1.98
SPO20YMR017W YLR179CQ06252 201 aaKnown RBP2.69□□□□□ -1.98
SPO20YMR017W RRP40Q08285 240 aaKnown RBP2.69□□□□□ -1.98
SPO20YMR017W TY3A-GQ12173 290 aa2.69□□□□□ -1.98
SPO20YMR017W YOR029WQ12243 111 aa2.69□□□□□ -1.98
SPO20YMR017W EMP46Q12396 444 aa2.69□□□□□ -1.98
SPO20YMR017W TY3A-IQ99219 290 aa2.69□□□□□ -1.98
SPO20YMR017W SGA1P08019 549 aa2.68□□□□□ -1.98
SPO20YMR017W YBR096WP38256 230 aa2.68□□□□□ -1.98
SPO20YMR017W YGP1P38616 354 aaKnown RBP2.68□□□□□ -1.98
SPO20YMR017W YNL134CP53912 376 aaKnown RBP2.68□□□□□ -1.98
SPO20YMR017W RSM10Q03201 203 aa2.68□□□□□ -1.98
SPO20YMR017W GOT1Q03554 138 aa2.68□□□□□ -1.98
SPO20YMR017W YLR173WQ06247 608 aa2.68□□□□□ -1.98
SPO20YMR017W MSH5Q12175 901 aa2.68□□□□□ -1.98
SPO20YMR017W MON2P48563 1636 aaPredicted RBP2.68□□□□□ -1.98
SPO20YMR017W TY1B-DR4Q07793 1604 aa2.68□□□□□ -1.98
SPO20YMR017W SWI1P09547 1314 aa2.68□□□□□ -1.98
SPO20YMR017W SGE1P33335 543 aa2.67□□□□□ -1.98
SPO20YMR017W GOS1P38736 223 aa2.67□□□□□ -1.98
SPO20YMR017W YHL026CP38740 315 aa2.67□□□□□ -1.98
SPO20YMR017W MRPL49P40858 161 aaPredicted RBP2.67□□□□□ -1.98
SPO20YMR017W SPG4Q04438 115 aa2.67□□□□□ -1.98
SPO20YMR017W SYC1Q08553 188 aaPredicted RBP2.67□□□□□ -1.98
SPO20YMR017W CSM4Q08955 156 aa2.67□□□□□ -1.98
SPO20YMR017W SAS5Q99314 248 aa2.67□□□□□ -1.98
SPO20YMR017W FZO1P38297 855 aa2.66□□□□□ -1.98
SPO20YMR017W CGI121Q03705 181 aaKnown RBP2.66□□□□□ -1.98
SPO20YMR017W BBP1Q12365 385 aa2.66□□□□□ -1.98
SPO20YMR017W TCB3Q03640 1545 aaKnown RBP2.66□□□□□ -1.98
SPO20YMR017W SCO1P23833 295 aa2.65□□□□□ -1.99
SPO20YMR017W RCN1P36054 211 aa2.65□□□□□ -1.99
SPO20YMR017W YHB1P39676 399 aaKnown RBP2.65□□□□□ -1.99
SPO20YMR017W THO1P40040 218 aaKnown RBP2.65□□□□□ -1.99
SPO20YMR017W OST2P46964 130 aa2.65□□□□□ -1.99
SPO20YMR017W COS6P53344 381 aa2.65□□□□□ -1.99
SPO20YMR017W SNZ2P53824 298 aa2.65□□□□□ -1.99
SPO20YMR017W RRS1Q08746 203 aaKnown RBP2.65□□□□□ -1.99
SPO20YMR017W YCT1Q12235 531 aa2.65□□□□□ -1.99
SPO20YMR017W MRPL39P36533 70 aa2.64□□□□□ -1.99
SPO20YMR017W BFR1P38934 470 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
SPO20YMR017W YER189WP40104 122 aa2.64□□□□□ -1.99
SPO20YMR017W JHD2P47156 728 aaPredicted RBP2.64□□□□□ -1.99
SPO20YMR017W RHO3Q00245 231 aaKnown RBP2.64□□□□□ -1.99
SPO20YMR017W YOR283WQ12040 230 aaKnown RBP2.64□□□□□ -1.99
SPO20YMR017W SNU23Q12368 194 aaPredicted RBP2.64□□□□□ -1.99
SPO20YMR017W TCP1P12612 559 aaKnown RBP2.63□□□□□ -1.99
SPO20YMR017W RRN5Q02983 363 aa2.63□□□□□ -1.99
SPO20YMR017W PAM18Q07914 168 aa2.63□□□□□ -1.99
SPO20YMR017W MED4Q12343 284 aa2.63□□□□□ -1.99
SPO20YMR017W ATG31Q12421 196 aa2.63□□□□□ -1.99
SPO20YMR017W COS8P38723 381 aa2.62□□□□□ -1.99
SPO20YMR017W DAN1P47178 298 aa2.62□□□□□ -1.99
SPO20YMR017W MRPL50P53724 139 aa2.62□□□□□ -1.99
SPO20YMR017W YOR186WQ08560 144 aa2.62□□□□□ -1.99
SPO20YMR017W EMC6Q12431 108 aa2.62□□□□□ -1.99
SPO20YMR017W YLR462WO13556 202 aa2.61□□□□□ -1.99
SPO20YMR017W SCM4P32564 187 aa2.61□□□□□ -1.99
SPO20YMR017W YEL075CP39972 122 aa2.61□□□□□ -1.99
SPO20YMR017W SNX4P47057 423 aa2.61□□□□□ -1.99
SPO20YMR017W YJR079WP47126 109 aa2.61□□□□□ -1.99
SPO20YMR017W SRL4Q03085 281 aa2.61□□□□□ -1.99
SPO20YMR017W CCA1P21269 546 aa2.6□□□□□ -1.99
SPO20YMR017W MSA2P36157 363 aa2.6□□□□□ -1.99
SPO20YMR017W GRE3P38715 327 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
SPO20YMR017W YHR127WP38833 243 aaKnown RBP2.6□□□□□ -1.99
SPO20YMR017W ARC15P40518 154 aaRIP-Chip data2.6□□□□□ -1.99not detected
SPO20YMR017W HOC1P47124 396 aa2.6□□□□□ -1.99
SPO20YMR017W FAR8Q05040 523 aa2.6□□□□□ -1.99
SPO20YMR017W SWR1Q05471 1514 aa2.59□□□□□ -1.99
SPO20YMR017W YCR102CP25608 368 aa2.59□□□□□ -1.99
SPO20YMR017W YOR062CP36025 268 aa2.59□□□□□ -1.99
SPO20YMR017W YGL159WP53110 370 aa2.59□□□□□ -1.99
SPO20YMR017W YNL046WP53956 172 aa2.59□□□□□ -1.99
SPO20YMR017W YLR030WQ07967 263 aa2.59□□□□□ -1.99
SPO20YMR017W HSL1P34244 1518 aa2.58□□□□□ -2
SPO20YMR017W Q0255P03881 472 aa2.58□□□□□ -2
SPO20YMR017W YHR032W-AP0C5N6 59 aa2.58□□□□□ -2
SPO20YMR017W ERG24P32462 438 aaKnown RBP2.58□□□□□ -2
SPO20YMR017W FMC1P40491 155 aa2.58□□□□□ -2
SPO20YMR017W SMD3P43321 101 aaKnown RBP2.58□□□□□ -2
SPO20YMR017W KRE28Q04431 385 aa2.58□□□□□ -2
SPO20YMR017W SEI1Q06058 285 aa2.58□□□□□ -2
SPO20YMR017W SPA2P23201 1466 aaKnown RBP2.58□□□□□ -2
SPO20YMR017W SPT6P23615 1451 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms