RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C TRM7P38238 310 aaKnown RBP2.57□□□□□ -2
PML39YML107C MND1P53102 219 aa2.57□□□□□ -2
PML39YML107C SNZ1Q03148 297 aa2.57□□□□□ -2
PML39YML107C VPS60Q03390 229 aa2.57□□□□□ -2
PML39YML107C TVP15Q03860 143 aa2.57□□□□□ -2
PML39YML107C BOP2Q06150 570 aa2.57□□□□□ -2
PML39YML107C PRR2Q12310 699 aa2.57□□□□□ -2
PML39YML107C TIM22Q12328 207 aa2.57□□□□□ -2
PML39YML107C GIS3Q12418 502 aa2.57□□□□□ -2
PML39YML107C GSC2P40989 1895 aa2.56□□□□□ -2
PML39YML107C PET494P07390 489 aaPredicted RBP2.56□□□□□ -2
PML39YML107C KRE1P17260 313 aa2.56□□□□□ -2
PML39YML107C RSA4P25382 515 aaKnown RBP2.56□□□□□ -2
PML39YML107C CAM1P29547 415 aaKnown RBP2.56□□□□□ -2
PML39YML107C ERG2P32352 222 aa2.56□□□□□ -2
PML39YML107C CAB3P36076 571 aa2.56□□□□□ -2
PML39YML107C PEX31P53203 462 aa2.56□□□□□ -2
PML39YML107C TIM21P53220 239 aa2.56□□□□□ -2
PML39YML107C FEX1Q08913 375 aa2.56□□□□□ -2
PML39YML107C FEX2Q08991 375 aa2.56□□□□□ -2
PML39YML107C PER33Q12144 273 aa2.56□□□□□ -2
PML39YML107C FMP16Q12497 93 aa2.56□□□□□ -2
PML39YML107C YEL009C-AA0A023PZF2 135 aa2.55□□□□□ -2
PML39YML107C JIP3O13555 125 aa2.55□□□□□ -2
PML39YML107C FRS2P15625 503 aaKnown RBP2.55□□□□□ -2
PML39YML107C RPB4P20433 221 aaPredicted RBP2.55□□□□□ -2
PML39YML107C MGM101P32787 269 aaKnown RBP2.55□□□□□ -2
PML39YML107C MRPL37P36532 105 aa2.55□□□□□ -2
PML39YML107C TRA1P38811 3744 aa2.55□□□□□ -2
PML39YML107C GCN20P43535 752 aaKnown RBP2.55□□□□□ -2
PML39YML107C APC1P53886 1748 aa2.55□□□□□ -2
PML39YML107C IGO1P53897 168 aa2.55□□□□□ -2
PML39YML107C YNL134CP53912 376 aaKnown RBP2.55□□□□□ -2
PML39YML107C SPP2Q02521 185 aa2.55□□□□□ -2
PML39YML107C ATG5Q12380 294 aa2.55□□□□□ -2
PML39YML107C CDC36P06100 191 aaPredicted RBP2.54□□□□□ -2
PML39YML107C RPL40AP0CH08 128 aaKnown RBP2.54□□□□□ -2
PML39YML107C RPL40BP0CH09 128 aaKnown RBP2.54□□□□□ -2
PML39YML107C APA2P22108 325 aa2.54□□□□□ -2
PML39YML107C RRT12P25381 491 aa2.54□□□□□ -2
PML39YML107C ATG15P25641 520 aa2.54□□□□□ -2
PML39YML107C SPL2P38839 148 aa2.54□□□□□ -2
PML39YML107C YER084WP40057 128 aa2.54□□□□□ -2
PML39YML107C EMC2P47133 292 aaKnown RBP2.54□□□□□ -2
PML39YML107C IBA57P47158 497 aa2.54□□□□□ -2
PML39YML107C SYF2P53277 215 aaPredicted RBP2.54□□□□□ -2
PML39YML107C MIX17Q03667 156 aa2.54□□□□□ -2
PML39YML107C VBA1Q04301 562 aa2.54□□□□□ -2
PML39YML107C SFH1Q06168 426 aa2.54□□□□□ -2
PML39YML107C SEC10Q06245 871 aa2.54□□□□□ -2
PML39YML107C YOL107WQ12239 342 aa2.54□□□□□ -2
PML39YML107C CSF1Q12150 2958 aa2.54□□□□□ -2
PML39YML107C YAL064W-BO13512 126 aa2.53□□□□□ -2
PML39YML107C TDH2P00358 332 aaKnown RBP2.53□□□□□ -2
PML39YML107C RPS3P05750 240 aaKnown RBP2.53□□□□□ -2
PML39YML107C YHI9P38765 294 aa2.53□□□□□ -2
PML39YML107C LIA1P47120 325 aaKnown RBP2.53□□□□□ -2
PML39YML107C HOP2P53187 214 aa2.53□□□□□ -2
PML39YML107C SSA3P09435 649 aaKnown RBP2.52□□□□□ -2.01
PML39YML107C ZWF1P11412 505 aaKnown RBP2.52□□□□□ -2.01
PML39YML107C PEX3P28795 441 aa2.52□□□□□ -2.01
PML39YML107C SRB4P32569 687 aa2.52□□□□□ -2.01
PML39YML107C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
PML39YML107C YHR045WP38775 560 aa2.52□□□□□ -2.01
PML39YML107C SUR2P38992 349 aa2.52□□□□□ -2.01
PML39YML107C YER188WP40103 239 aa2.52□□□□□ -2.01
PML39YML107C MSS2P40990 351 aa2.52□□□□□ -2.01
PML39YML107C FMP41P53889 259 aaKnown RBP2.52□□□□□ -2.01
PML39YML107C GIM3P53900 129 aa2.52□□□□□ -2.01
PML39YML107C MRPS17Q03246 237 aaPredicted RBP2.52□□□□□ -2.01
PML39YML107C ATC1Q04005 294 aa2.52□□□□□ -2.01
PML39YML107C YLR173WQ06247 608 aa2.52□□□□□ -2.01
PML39YML107C ISD11Q6Q560 94 aa2.52□□□□□ -2.01
PML39YML107C RIM15P43565 1770 aa2.51□□□□□ -2.01
PML39YML107C SSK22P25390 1331 aaPredicted RBP2.51□□□□□ -2.01
PML39YML107C IKI3Q06706 1349 aaKnown RBP2.51□□□□□ -2.01
PML39YML107C RSR1P13856 272 aa2.51□□□□□ -2.01
PML39YML107C ECM4P36156 370 aa2.51□□□□□ -2.01
PML39YML107C SIP3P38717 1229 aa2.51□□□□□ -2.01
PML39YML107C YER085CP40058 173 aa2.51□□□□□ -2.01
PML39YML107C RTR1P40084 226 aaPredicted RBP2.51□□□□□ -2.01
PML39YML107C FMP33P46998 180 aa2.51□□□□□ -2.01
PML39YML107C TAD2P47058 250 aa2.51□□□□□ -2.01
PML39YML107C MPP6P53725 186 aaPredicted RBP2.51□□□□□ -2.01
PML39YML107C TRM44Q02648 567 aaKnown RBP2.51□□□□□ -2.01
PML39YML107C CDD1Q06549 142 aa2.51□□□□□ -2.01
PML39YML107C YOS9Q99220 542 aa2.51□□□□□ -2.01
PML39YML107C HIS3P06633 220 aa2.5□□□□□ -2.01
PML39YML107C POL30P15873 258 aaKnown RBP2.5□□□□□ -2.01
PML39YML107C VPS3P23643 1011 aa2.5□□□□□ -2.01
PML39YML107C POF1P25576 258 aa2.5□□□□□ -2.01
PML39YML107C BMH1P29311 267 aaKnown RBP2.5□□□□□ -2.01
PML39YML107C ACP1P32463 125 aa2.5□□□□□ -2.01
PML39YML107C ATG12P38316 186 aa2.5□□□□□ -2.01
PML39YML107C SHC1P39000 512 aa2.5□□□□□ -2.01
PML39YML107C YNL095CP53932 642 aa2.5□□□□□ -2.01
PML39YML107C SSQ1Q05931 657 aaPredicted RBP2.5□□□□□ -2.01
PML39YML107C CTR3Q06686 241 aa2.5□□□□□ -2.01
PML39YML107C YOL019WQ08157 551 aa2.5□□□□□ -2.01
PML39YML107C CFT1Q06632 1357 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms