RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C SCW10Q04951 389 aa2.52□□□□□ -2.01
VPS9YML097C YLR179CQ06252 201 aaKnown RBP2.52□□□□□ -2.01
VPS9YML097C CDD1Q06549 142 aa2.52□□□□□ -2.01
VPS9YML097C YBL008W-AQ3E821 79 aa2.52□□□□□ -2.01
VPS9YML097C YOL085CQ99345 113 aa2.52□□□□□ -2.01
VPS9YML097C COX5AP00424 153 aa2.51□□□□□ -2.01
VPS9YML097C TPI1P00942 248 aaKnown RBP2.51□□□□□ -2.01
VPS9YML097C CBP6P07253 162 aaPredicted RBP2.51□□□□□ -2.01
VPS9YML097C NOP1P15646 327 aaKnown RBP2.51□□□□□ -2.01
VPS9YML097C TAF14P35189 244 aa2.51□□□□□ -2.01
VPS9YML097C YER034WP40022 185 aaKnown RBP2.51□□□□□ -2.01
VPS9YML097C SYS1P41544 203 aa2.51□□□□□ -2.01
VPS9YML097C UFE1P41834 346 aa2.51□□□□□ -2.01
VPS9YML097C MIC26P50087 233 aa2.51□□□□□ -2.01
VPS9YML097C AAH1P53909 347 aa2.51□□□□□ -2.01
VPS9YML097C ACT1P60010 375 aaKnown RBP2.51□□□□□ -2.01
VPS9YML097C YPL039WQ03080 316 aa2.51□□□□□ -2.01
VPS9YML097C GOT1Q03554 138 aa2.51□□□□□ -2.01
VPS9YML097C MRX8Q05473 314 aa2.51□□□□□ -2.01
VPS9YML097C YPR011CQ12251 326 aa2.51□□□□□ -2.01
VPS9YML097C PAN1P32521 1480 aa2.51□□□□□ -2.01
VPS9YML097C SWI1P09547 1314 aa2.51□□□□□ -2.01
VPS9YML097C YKL075CP36083 450 aa2.5□□□□□ -2.01
VPS9YML097C DRE2P36152 348 aa2.5□□□□□ -2.01
VPS9YML097C SSH1P38353 490 aaKnown RBP2.5□□□□□ -2.01
VPS9YML097C YFL012WP43580 148 aa2.5□□□□□ -2.01
VPS9YML097C CPR7P47103 393 aa2.5□□□□□ -2.01
VPS9YML097C NUP57P48837 541 aa2.5□□□□□ -2.01
VPS9YML097C SNZ1Q03148 297 aa2.5□□□□□ -2.01
VPS9YML097C YMR114CQ04471 368 aaKnown RBP2.5□□□□□ -2.01
VPS9YML097C YDR124WQ04608 324 aa2.5□□□□□ -2.01
VPS9YML097C SEI1Q06058 285 aa2.5□□□□□ -2.01
VPS9YML097C YOL019WQ08157 551 aa2.5□□□□□ -2.01
VPS9YML097C SLD7Q08457 257 aa2.5□□□□□ -2.01
VPS9YML097C YPS3Q12303 508 aa2.5□□□□□ -2.01
VPS9YML097C ATG5Q12380 294 aa2.5□□□□□ -2.01
VPS9YML097C DCN1Q12395 269 aa2.5□□□□□ -2.01
VPS9YML097C JIP3O13555 125 aa2.49□□□□□ -2.01
VPS9YML097C BCY1P07278 416 aaKnown RBP2.49□□□□□ -2.01
VPS9YML097C URA6P15700 204 aa2.49□□□□□ -2.01
VPS9YML097C PRE7P23724 241 aaKnown RBP2.49□□□□□ -2.01
VPS9YML097C RAD51P25454 400 aa2.49□□□□□ -2.01
VPS9YML097C RFA3P26755 122 aaKnown RBP2.49□□□□□ -2.01
VPS9YML097C CSG2P35206 410 aa2.49□□□□□ -2.01
VPS9YML097C YHB1P39676 399 aaKnown RBP2.49□□□□□ -2.01
VPS9YML097C COQ5P49017 307 aa2.49□□□□□ -2.01
VPS9YML097C MGA1P53050 456 aa2.49□□□□□ -2.01
VPS9YML097C YGL034CP53186 121 aa2.49□□□□□ -2.01
VPS9YML097C NOP19P53317 196 aaPredicted RBP2.49□□□□□ -2.01
VPS9YML097C FYV6P53913 173 aa2.49□□□□□ -2.01
VPS9YML097C DRS2P39524 1355 aa2.49□□□□□ -2.01
VPS9YML097C NUP157P40064 1391 aaKnown RBP2.49□□□□□ -2.01
VPS9YML097C CPT1P17898 393 aa2.49□□□□□ -2.01
VPS9YML097C SPS18P32572 300 aa2.49□□□□□ -2.01
VPS9YML097C CAB3P36076 571 aa2.49□□□□□ -2.01
VPS9YML097C YJL028WP47062 111 aa2.49□□□□□ -2.01
VPS9YML097C UFD1P53044 361 aa2.49□□□□□ -2.01
VPS9YML097C MRH4P53166 561 aa2.49□□□□□ -2.01
VPS9YML097C GET1P53192 235 aa2.49□□□□□ -2.01
VPS9YML097C OSH6Q02201 448 aa2.49□□□□□ -2.01
VPS9YML097C EMI1Q04406 187 aa2.49□□□□□ -2.01
VPS9YML097C YEL009C-AA0A023PZF2 135 aa2.48□□□□□ -2.01
VPS9YML097C COS2P0CX12 379 aa2.48□□□□□ -2.01
VPS9YML097C COS3P0CX13 379 aa2.48□□□□□ -2.01
VPS9YML097C SNA3P14359 133 aa2.48□□□□□ -2.01
VPS9YML097C DBF2P22204 572 aa2.48□□□□□ -2.01
VPS9YML097C LDB16P25587 256 aa2.48□□□□□ -2.01
VPS9YML097C RME1P32338 300 aaKnown RBP2.48□□□□□ -2.01
VPS9YML097C PRX1P34227 261 aaKnown RBP2.48□□□□□ -2.01
VPS9YML097C YHI9P38765 294 aa2.48□□□□□ -2.01
VPS9YML097C IKI1P38874 309 aa2.48□□□□□ -2.01
VPS9YML097C COS4P43542 379 aa2.48□□□□□ -2.01
VPS9YML097C HOP2P53187 214 aa2.48□□□□□ -2.01
VPS9YML097C TSA2Q04120 196 aa2.48□□□□□ -2.01
VPS9YML097C YDR222WQ04925 415 aa2.48□□□□□ -2.01
VPS9YML097C SYC1Q08553 188 aaPredicted RBP2.48□□□□□ -2.01
VPS9YML097C YOR186WQ08560 144 aa2.48□□□□□ -2.01
VPS9YML097C ABP140Q08641 628 aaKnown RBP2.48□□□□□ -2.01
VPS9YML097C PST1Q12355 444 aa2.48□□□□□ -2.01
VPS9YML097C TUS1Q06412 1307 aa2.47□□□□□ -2.01
VPS9YML097C YAK1P14680 807 aa2.47□□□□□ -2.01
VPS9YML097C DPB2P24482 689 aaPredicted RBP2.47□□□□□ -2.01
VPS9YML097C MRPS9P38120 278 aa2.47□□□□□ -2.01
VPS9YML097C SEO1P39709 593 aa2.47□□□□□ -2.01
VPS9YML097C BMT5P40493 336 aa2.47□□□□□ -2.01
VPS9YML097C MCM22P47167 239 aa2.47□□□□□ -2.01
VPS9YML097C YJR149WP47177 404 aa2.47□□□□□ -2.01
VPS9YML097C YNL046WP53956 172 aa2.47□□□□□ -2.01
VPS9YML097C SMD1Q02260 146 aaPredicted RBP2.47□□□□□ -2.01
VPS9YML097C FAR8Q05040 523 aa2.47□□□□□ -2.01
VPS9YML097C MSA1Q08471 629 aa2.47□□□□□ -2.01
VPS9YML097C GPM2Q12008 311 aa2.47□□□□□ -2.01
VPS9YML097C TPO4Q12256 659 aa2.47□□□□□ -2.01
VPS9YML097C YCL012CQ8J0M4 134 aa2.47□□□□□ -2.01
VPS9YML097C QCR7P00128 127 aa2.46□□□□□ -2.02
VPS9YML097C CDC28P00546 298 aaKnown RBP2.46□□□□□ -2.02
VPS9YML097C IPP1P00817 287 aaKnown RBP2.46□□□□□ -2.02
VPS9YML097C TRM5P38793 499 aa2.46□□□□□ -2.02
VPS9YML097C RMR1P53060 241 aa2.46□□□□□ -2.02
VPS9YML097C BRR6P53062 197 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 102.7 ms