RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	ASC1	P38011	319 aa	Known RBP	5.15	□□□□□ -1.58
DBP9	YLR276C	PMT6	P42934	759 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	NET1	P47035	1189 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	AVT4	P50944	713 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	COS10	P52924	374 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	PEX31	P53203	462 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	TIM21	P53220	239 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	YNR066C	P53752	436 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	YML053C	Q04978	212 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	THP1	Q08231	455 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	MDY2	Q12285	212 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	ERP3	Q12403	225 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	COA6	Q3E846	104 aa		5.15	□□□□□ -1.58
DBP9	YLR276C	FLO1	P32768	1537 aa		5.15	□□□□□ -1.59
DBP9	YLR276C	SIR2	P06700	562 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	AMD1	P15274	810 aa	Known RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	YCL068C	P25593	260 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	AFG1	P32317	509 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	NTF2	P33331	125 aa	Known RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	SFK1	P35735	353 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	PTK1	P36002	662 aa	Predicted RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	COS9	P36034	407 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YPT31	P38555	223 aa	Known RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	YHR035W	P38769	630 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YHR122W	P38829	231 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	VPS52	P39904	641 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	FLX1	P40464	311 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	OPT1	P40897	799 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YFR020W	P43600	232 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	IRC7	P43623	340 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	GWT1	P47026	490 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YJR011C	P47086	261 aa	Predicted RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	YGR149W	P48236	432 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	PHB2	P50085	310 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	MDM34	P53083	459 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YGL101W	P53144	215 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	COQ6	P53318	479 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YDR366C	P87287	132 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YVH1	Q02256	364 aa	Known RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	NUP100	Q02629	959 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YDC1	Q02896	317 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	EMI1	Q04406	187 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YML096W	Q04489	525 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YMR253C	Q04835	414 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	CUR1	Q06469	252 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	AIM39	Q08223	395 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	CRT10	Q08226	957 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	YLR049C	Q12110	428 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	PRM4	Q12498	284 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	SFG1	Q12507	346 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	COX2	P00410	251 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	SAM2	P19358	384 aa	Known RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	YCR090C	P25654	182 aa	Known RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
DBP9	YLR276C	VBA2	P38358	474 aa	Known RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	SUR2	P38992	349 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	BDH1	P39714	382 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	RRG9	P40156	214 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	OST3	P48439	350 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	SYF2	P53277	215 aa	Predicted RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	SKO1	Q02100	647 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	TRS23	Q03784	219 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	RNH202	Q05635	350 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	MRX9	Q07349	420 aa	Known RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	ATG41	Q12048	136 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	UBX3	Q12229	455 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	RDL1	Q12305	139 aa	Known RBP	5.14	□□□□□ -1.59
DBP9	YLR276C	RRI1	Q12468	440 aa		5.14	□□□□□ -1.59
DBP9	YLR276C	PUT1	P09368	476 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	PMI40	P29952	429 aa	Known RBP	5.13	□□□□□ -1.59
DBP9	YLR276C	MSK1	P32048	576 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	HMX1	P32339	317 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	HTD2	P38790	280 aa	Known RBP	5.13	□□□□□ -1.59
DBP9	YLR276C	ASP1	P38986	381 aa	Predicted RBP	5.13	□□□□□ -1.59
DBP9	YLR276C	YJL132W	P47014	750 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	GTR2	P53290	341 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	SAY1	P53324	424 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	AAT1	Q01802	451 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	DIG2	Q03373	323 aa	Known RBP	5.13	□□□□□ -1.59
DBP9	YLR276C	EKI1	Q03764	534 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	UPS3	Q04006	179 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	YDR415C	Q04033	374 aa	Predicted RBP	5.13	□□□□□ -1.59
DBP9	YLR276C	YMR087W	Q04299	284 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	GMC1	Q04399	608 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	REX4	Q08237	289 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	TMS1	Q12116	473 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
DBP9	YLR276C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
DBP9	YLR276C	RDI1	Q12434	202 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	WIP1	Q2V2P8	89 aa		5.13	□□□□□ -1.59
DBP9	YLR276C	COX5B	P00425	151 aa		5.12	□□□□□ -1.59
DBP9	YLR276C	HAP3	P13434	144 aa		5.12	□□□□□ -1.59
DBP9	YLR276C	PPH21	P23594	369 aa		5.12	□□□□□ -1.59
DBP9	YLR276C	STP22	P25604	385 aa		5.12	□□□□□ -1.59
DBP9	YLR276C	YSC83	P32792	385 aa		5.12	□□□□□ -1.59
DBP9	YLR276C	FIG1	P38224	298 aa		5.12	□□□□□ -1.59
DBP9	YLR276C	YPC1	P38298	316 aa		5.12	□□□□□ -1.59
DBP9	YLR276C	DBP8	P38719	431 aa		5.12	□□□□□ -1.59
DBP9	YLR276C	WSS1	P38838	269 aa		5.12	□□□□□ -1.59
DBP9	YLR276C	PFS1	P38872	237 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms