RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W USE1P53146 245 aa2.09□□□□□ -2.07
HRD3YLR207W MTM1P53320 366 aa2.09□□□□□ -2.07
HRD3YLR207W IBD2P53892 351 aa2.09□□□□□ -2.07
HRD3YLR207W RRP17Q04031 235 aaPredicted RBP2.09□□□□□ -2.07
HRD3YLR207W YPR114WQ06107 315 aa2.09□□□□□ -2.07
HRD3YLR207W RRS1Q08746 203 aaKnown RBP2.09□□□□□ -2.07
HRD3YLR207W MEC1P38111 2368 aa2.09□□□□□ -2.07
HRD3YLR207W YDR157WA0A023PZE8 133 aa2.09□□□□□ -2.08
HRD3YLR207W YFL068WP0CX99 160 aa2.09□□□□□ -2.08
HRD3YLR207W YLL066W-AP0CY00 160 aa2.09□□□□□ -2.08
HRD3YLR207W YLL067W-AP0CY01 160 aa2.09□□□□□ -2.08
HRD3YLR207W YCR022CP25620 114 aa2.09□□□□□ -2.08
HRD3YLR207W QRI5P32344 111 aa2.09□□□□□ -2.08
HRD3YLR207W PTM1P32857 523 aa2.09□□□□□ -2.08
HRD3YLR207W MRP21P38175 177 aa2.09□□□□□ -2.08
HRD3YLR207W AVT5P38176 459 aa2.09□□□□□ -2.08
HRD3YLR207W PHO89P38361 574 aa2.09□□□□□ -2.08
HRD3YLR207W NPT1P39683 429 aaKnown RBP2.09□□□□□ -2.08
HRD3YLR207W JLP2P40206 208 aa2.09□□□□□ -2.08
HRD3YLR207W TIF34P40217 347 aaKnown RBP2.09□□□□□ -2.08
HRD3YLR207W YGL159WP53110 370 aa2.09□□□□□ -2.08
HRD3YLR207W NOP19P53317 196 aaPredicted RBP2.09□□□□□ -2.08
HRD3YLR207W SSU72P53538 206 aaPredicted RBP2.09□□□□□ -2.08
HRD3YLR207W SEC13Q04491 297 aaKnown RBP2.09□□□□□ -2.08
HRD3YLR207W ARC18Q05933 178 aaKnown RBP2.09□□□□□ -2.08
HRD3YLR207W ATG17Q06410 417 aa2.09□□□□□ -2.08
HRD3YLR207W MHR1Q06630 226 aa2.09□□□□□ -2.08
HRD3YLR207W YDL109CQ12103 647 aa2.09□□□□□ -2.08
HRD3YLR207W RIO1Q12196 484 aaKnown RBP2.09□□□□□ -2.08
HRD3YLR207W JLP1Q12358 412 aa2.09□□□□□ -2.08
HRD3YLR207W HMS1Q12398 434 aa2.09□□□□□ -2.08
HRD3YLR207W YPL247CQ12523 523 aa2.09□□□□□ -2.08
HRD3YLR207W GPA2P10823 449 aa2.08□□□□□ -2.08
HRD3YLR207W RPC19P28000 142 aaKnown RBP2.08□□□□□ -2.08
HRD3YLR207W MCH2P36032 473 aa2.08□□□□□ -2.08
HRD3YLR207W FRT2P39734 528 aa2.08□□□□□ -2.08
HRD3YLR207W YIL152WP40455 235 aa2.08□□□□□ -2.08
HRD3YLR207W HAC1P41546 238 aa2.08□□□□□ -2.08
HRD3YLR207W LCB3P47013 409 aa2.08□□□□□ -2.08
HRD3YLR207W UBC13P52490 153 aa2.08□□□□□ -2.08
HRD3YLR207W AIF1P52923 378 aa2.08□□□□□ -2.08
HRD3YLR207W CDH1P53197 566 aa2.08□□□□□ -2.08
HRD3YLR207W MTQ1P53944 314 aa2.08□□□□□ -2.08
HRD3YLR207W TRM82Q03774 444 aa2.08□□□□□ -2.08
HRD3YLR207W HPT1Q04178 221 aaKnown RBP2.08□□□□□ -2.08
HRD3YLR207W PEX10Q05568 337 aa2.08□□□□□ -2.08
HRD3YLR207W GAS2Q06135 555 aa2.08□□□□□ -2.08
HRD3YLR207W HEM25Q07534 307 aa2.08□□□□□ -2.08
HRD3YLR207W DTD1Q07648 150 aaKnown RBP2.08□□□□□ -2.08
HRD3YLR207W RPN6Q12377 434 aa2.08□□□□□ -2.08
HRD3YLR207W RPL23AP0CX41 137 aaKnown RBP2.08□□□□□ -2.08
HRD3YLR207W RPL23BP0CX42 137 aaKnown RBP2.08□□□□□ -2.08
HRD3YLR207W NAM2P11325 894 aa2.08□□□□□ -2.08
HRD3YLR207W EPT1P22140 391 aa2.08□□□□□ -2.08
HRD3YLR207W AAT2P23542 418 aaKnown RBP2.08□□□□□ -2.08
HRD3YLR207W YCR043CP25361 127 aa2.08□□□□□ -2.08
HRD3YLR207W ADE1P27616 306 aa2.08□□□□□ -2.08
HRD3YLR207W DEP1P31385 405 aa2.08□□□□□ -2.08
HRD3YLR207W PHA2P32452 334 aa2.08□□□□□ -2.08
HRD3YLR207W BMT2P38278 337 aa2.08□□□□□ -2.08
HRD3YLR207W SEO1P39709 593 aa2.08□□□□□ -2.08
HRD3YLR207W YER184CP39961 794 aa2.08□□□□□ -2.08
HRD3YLR207W NCA3P46955 337 aa2.08□□□□□ -2.08
HRD3YLR207W IBA57P47158 497 aa2.08□□□□□ -2.08
HRD3YLR207W RPM2Q02773 1202 aa2.08□□□□□ -2.08
HRD3YLR207W GOT1Q03554 138 aa2.08□□□□□ -2.08
HRD3YLR207W TRM12Q04235 462 aa2.08□□□□□ -2.08
HRD3YLR207W EMI1Q04406 187 aa2.08□□□□□ -2.08
HRD3YLR207W GRX8Q05926 109 aa2.08□□□□□ -2.08
HRD3YLR207W FAR10Q06001 478 aa2.08□□□□□ -2.08
HRD3YLR207W FCY22Q12119 530 aa2.08□□□□□ -2.08
HRD3YLR207W YCT1Q12235 531 aa2.08□□□□□ -2.08
HRD3YLR207W NAG1Q8TGN9 163 aa2.08□□□□□ -2.08
HRD3YLR207W QCR7P00128 127 aa2.07□□□□□ -2.08
HRD3YLR207W HEM4P06174 275 aa2.07□□□□□ -2.08
HRD3YLR207W CDC10P25342 322 aaKnown RBP2.07□□□□□ -2.08
HRD3YLR207W SPO23P33757 523 aa2.07□□□□□ -2.08
HRD3YLR207W PTC1P35182 281 aa2.07□□□□□ -2.08
HRD3YLR207W TAF14P35189 244 aa2.07□□□□□ -2.08
HRD3YLR207W JEN1P36035 616 aa2.07□□□□□ -2.08
HRD3YLR207W ANR2P36090 516 aaPredicted RBP2.07□□□□□ -2.08
HRD3YLR207W MAK5P38112 773 aaPredicted RBP2.07□□□□□ -2.08
HRD3YLR207W YBR241CP38142 488 aa2.07□□□□□ -2.08
HRD3YLR207W FZO1P38297 855 aa2.07□□□□□ -2.08
HRD3YLR207W IKI1P38874 309 aa2.07□□□□□ -2.08
HRD3YLR207W SOP4P39543 234 aaPredicted RBP2.07□□□□□ -2.08
HRD3YLR207W RPH1P39956 796 aa2.07□□□□□ -2.08
HRD3YLR207W SMB1P40018 196 aaKnown RBP2.07□□□□□ -2.08
HRD3YLR207W ADO1P47143 340 aaKnown RBP2.07□□□□□ -2.08
HRD3YLR207W COS1P53822 381 aa2.07□□□□□ -2.08
HRD3YLR207W RHO3Q00245 231 aaKnown RBP2.07□□□□□ -2.08
HRD3YLR207W RMI1Q02685 241 aa2.07□□□□□ -2.08
HRD3YLR207W YET2Q04210 160 aa2.07□□□□□ -2.08
HRD3YLR207W DPP1Q05521 289 aa2.07□□□□□ -2.08
HRD3YLR207W YLR177WQ06251 628 aa2.07□□□□□ -2.08
HRD3YLR207W TAZ1Q06510 381 aa2.07□□□□□ -2.08
HRD3YLR207W MRX9Q07349 420 aaKnown RBP2.07□□□□□ -2.08
HRD3YLR207W GRE1Q08969 168 aa2.07□□□□□ -2.08
HRD3YLR207W FRE8Q12209 686 aa2.07□□□□□ -2.08
HRD3YLR207W AYT1Q12226 474 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms