RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C YNL165WP53891 406 aa2.12□□□□□ -2.07
CSF1YLR087C UBC7Q02159 165 aa2.12□□□□□ -2.07
CSF1YLR087C DYN2Q02647 92 aa2.12□□□□□ -2.07
CSF1YLR087C DOT1Q04089 582 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C YLR179CQ06252 201 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C FDH1Q08911 376 aa2.12□□□□□ -2.07
CSF1YLR087C HIS1P00498 297 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C SNC1P31109 117 aa2.12□□□□□ -2.07
CSF1YLR087C MSA2P36157 363 aa2.12□□□□□ -2.07
CSF1YLR087C DOG1P38774 246 aa2.12□□□□□ -2.07
CSF1YLR087C YJR124CP47159 448 aa2.12□□□□□ -2.07
CSF1YLR087C TAD1P53065 400 aa2.12□□□□□ -2.07
CSF1YLR087C YGR266WP53326 701 aa2.12□□□□□ -2.07
CSF1YLR087C YLR030WQ07967 263 aa2.12□□□□□ -2.07
CSF1YLR087C HUT1Q12520 339 aa2.12□□□□□ -2.07
CSF1YLR087C PPR1P07272 904 aaPredicted RBP2.12□□□□□ -2.07
CSF1YLR087C MTF1P14908 341 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C SLY41P22215 453 aa2.12□□□□□ -2.07
CSF1YLR087C PPZ2P33329 710 aa2.12□□□□□ -2.07
CSF1YLR087C NCL1P38205 684 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C BAT1P38891 393 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C YGL235WP53071 178 aa2.12□□□□□ -2.07
CSF1YLR087C SHY1P53266 389 aa2.12□□□□□ -2.07
CSF1YLR087C BUD25P85052 153 aa2.12□□□□□ -2.07
CSF1YLR087C SKO1Q02100 647 aa2.12□□□□□ -2.07
CSF1YLR087C BSC6Q08280 497 aa2.12□□□□□ -2.07
CSF1YLR087C ICT1Q12385 394 aa2.12□□□□□ -2.07
CSF1YLR087C SPS4P09937 338 aa2.12□□□□□ -2.07
CSF1YLR087C RAD23P32628 398 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C TSA1P34760 196 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C GDH3P39708 457 aa2.12□□□□□ -2.07
CSF1YLR087C ALG8P40351 577 aa2.12□□□□□ -2.07
CSF1YLR087C RIB4P50861 169 aaPredicted RBP2.12□□□□□ -2.07
CSF1YLR087C MTQ1P53944 314 aa2.12□□□□□ -2.07
CSF1YLR087C NRT1Q08485 598 aa2.12□□□□□ -2.07
CSF1YLR087C RAD28Q12021 506 aa2.12□□□□□ -2.07
CSF1YLR087C USB1Q12208 290 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C MET3P08536 511 aa2.12□□□□□ -2.07
CSF1YLR087C IRC22P40006 225 aa2.12□□□□□ -2.07
CSF1YLR087C LSM5P40089 93 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C VNX1P42839 908 aa2.12□□□□□ -2.07
CSF1YLR087C TRM112P53738 135 aaPredicted RBP2.12□□□□□ -2.07
CSF1YLR087C PLB2Q03674 706 aa2.12□□□□□ -2.07
CSF1YLR087C HLR1Q04429 423 aa2.12□□□□□ -2.07
CSF1YLR087C PNS1Q12412 539 aa2.12□□□□□ -2.07
CSF1YLR087C HSP26P15992 214 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07 RIP-Chip
CSF1YLR087C MLS1P30952 554 aa2.12□□□□□ -2.07
CSF1YLR087C IMP3P32899 183 aaPredicted RBP2.12□□□□□ -2.07
CSF1YLR087C ALG14P38242 237 aa2.12□□□□□ -2.07
CSF1YLR087C MRM2P53123 320 aa2.12□□□□□ -2.07
CSF1YLR087C RHO4Q00246 291 aa2.12□□□□□ -2.07
CSF1YLR087C AIM33Q04516 312 aa2.12□□□□□ -2.07
CSF1YLR087C RRT8Q08219 342 aa2.12□□□□□ -2.07
CSF1YLR087C WTM1Q12363 437 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C ERG4P25340 473 aa2.11□□□□□ -2.07
CSF1YLR087C PHD1P36093 366 aa2.11□□□□□ -2.07
CSF1YLR087C YCR087C-AP37263 153 aa2.11□□□□□ -2.07
CSF1YLR087C HIS2P38635 335 aa2.11□□□□□ -2.07
CSF1YLR087C YHR045WP38775 560 aa2.11□□□□□ -2.07
CSF1YLR087C NSG1P38837 291 aa2.11□□□□□ -2.07
CSF1YLR087C AIP1P46680 615 aaKnown RBP2.11□□□□□ -2.07
CSF1YLR087C DUO1P53168 247 aaKnown RBP2.11□□□□□ -2.07
CSF1YLR087C ECM23Q02710 187 aa2.11□□□□□ -2.07
CSF1YLR087C SUL2Q12325 893 aa2.11□□□□□ -2.07
CSF1YLR087C YML003WP0CF16 290 aa2.11□□□□□ -2.07
CSF1YLR087C CPR1P14832 162 aaKnown RBP2.11□□□□□ -2.07
CSF1YLR087C THR1P17423 357 aaKnown RBP2.11□□□□□ -2.07
CSF1YLR087C SKN1P33336 771 aa2.11□□□□□ -2.07
CSF1YLR087C YKR051WP36142 418 aa2.11□□□□□ -2.07
CSF1YLR087C KRE29P40026 464 aa2.11□□□□□ -2.07
CSF1YLR087C CUP9P41817 306 aa2.11□□□□□ -2.07
CSF1YLR087C VPS73P53142 486 aaKnown RBP2.11□□□□□ -2.07
CSF1YLR087C CDC14Q00684 551 aa2.11□□□□□ -2.07
CSF1YLR087C ODC1Q03028 310 aa2.11□□□□□ -2.07
CSF1YLR087C OPI10Q08202 246 aa2.11□□□□□ -2.07
CSF1YLR087C REX3Q12090 404 aa2.11□□□□□ -2.07
CSF1YLR087C HAA1Q12753 694 aaKnown RBP2.11□□□□□ -2.07
CSF1YLR087C YBL029C-AQ3E756 94 aa2.11□□□□□ -2.07
CSF1YLR087C CHO1P08456 276 aa2.11□□□□□ -2.07
CSF1YLR087C SRD1P09007 221 aa2.11□□□□□ -2.07
CSF1YLR087C PHO85P17157 305 aa2.11□□□□□ -2.07
CSF1YLR087C SDH2P21801 266 aa2.11□□□□□ -2.07
CSF1YLR087C PPZ1P26570 692 aa2.11□□□□□ -2.07
CSF1YLR087C YHL026CP38740 315 aa2.11□□□□□ -2.07
CSF1YLR087C GCV3P39726 170 aaPredicted RBP2.11□□□□□ -2.07
CSF1YLR087C YEL028WP39989 153 aa2.11□□□□□ -2.07
CSF1YLR087C YJL043WP47053 257 aa2.11□□□□□ -2.07
CSF1YLR087C COQ5P49017 307 aa2.11□□□□□ -2.07
CSF1YLR087C MGA1P53050 456 aa2.11□□□□□ -2.07
CSF1YLR087C RKM5Q12367 367 aa2.11□□□□□ -2.07
CSF1YLR087C PHR1P05066 565 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
CSF1YLR087C BCS1P32839 456 aa2.11□□□□□ -2.07
CSF1YLR087C FLO5P38894 1075 aa2.11□□□□□ -2.07
CSF1YLR087C YJR096WP47137 282 aa2.11□□□□□ -2.07
CSF1YLR087C GAS3Q03655 524 aa2.11□□□□□ -2.07
CSF1YLR087C EMG1Q06287 252 aaKnown RBP2.11□□□□□ -2.07
CSF1YLR087C NOC4Q06512 552 aaPredicted RBP2.11□□□□□ -2.07
CSF1YLR087C NDD1Q08887 554 aa2.11□□□□□ -2.07
CSF1YLR087C GTT2Q12390 233 aa2.11□□□□□ -2.07
CSF1YLR087C ECM29P38737 1868 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms