RNA–Protein interactions for RNA: YLL035W

GRC3, Transcript of Polynucleotide kinase present on rDNA, yeast

Gene GRC3, Length 1,899 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GRC3	YLL035W	NTC20	P38302	140 aa	Predicted RBP	4.04	□□□□□ -1.76
GRC3	YLL035W	HTD2	P38790	280 aa	Known RBP	4.04	□□□□□ -1.76
GRC3	YLL035W	YHR122W	P38829	231 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	ARO9	P38840	513 aa	Predicted RBP	4.04	□□□□□ -1.76
GRC3	YLL035W	YHR177W	P38867	453 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	CHL4	P38907	458 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	SEC72	P39742	193 aa	Known RBP	4.04	□□□□□ -1.76
GRC3	YLL035W	RRG9	P40156	214 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	MPM1	P40364	252 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	COA1	P40452	197 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	MGA1	P53050	456 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	ASI3	P53983	676 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	RSM23	Q01163	450 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	YDR415C	Q04033	374 aa	Predicted RBP	4.04	□□□□□ -1.76
GRC3	YLL035W	YDR444W	Q04093	687 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	HPT1	Q04178	221 aa	Known RBP	4.04	□□□□□ -1.76
GRC3	YLL035W	TMN2	Q04562	672 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	HRD3	Q05787	833 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	NAT5	Q08689	176 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	FCF2	Q12035	217 aa	Predicted RBP	4.04	□□□□□ -1.76
GRC3	YLL035W	ATG41	Q12048	136 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	FRE8	Q12209	686 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	YLR118C	Q12354	227 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	YPL247C	Q12523	523 aa		4.04	□□□□□ -1.76
GRC3	YLL035W	RPL13A	Q12690	199 aa	Predicted RBP	4.04	□□□□□ -1.76
GRC3	YLL035W	ILV5	P06168	395 aa	Known RBP	4.03	□□□□□ -1.76
GRC3	YLL035W	PAU19	P0CE85	124 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	PAU21	P0CE86	164 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	PAU22	P0CE87	164 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	TFS1	P14306	219 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	PAU3	P25610	124 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	YCR099C	P25657	155 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	NTH1	P32356	751 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	REC104	P33323	182 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	OMA1	P36163	345 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	YER158C	P40095	573 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	YGR117C	P53270	476 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	TPS1	Q00764	495 aa	Known RBP	4.03	□□□□□ -1.76
GRC3	YLL035W	YKR011C	Q02209	353 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	SPP2	Q02521	185 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	ADH6	Q04894	360 aa	Known RBP	4.03	□□□□□ -1.76
GRC3	YLL035W	PAU23	Q07987	124 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	FSF1	Q12029	327 aa	Known RBP	4.03	□□□□□ -1.76
GRC3	YLL035W	PRR2	Q12310	699 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	JLP1	Q12358	412 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	PAU17	Q12370	124 aa		4.03	□□□□□ -1.76
GRC3	YLL035W	RPS31	P05759	152 aa	Known RBP	4.03	□□□□□ -1.77
GRC3	YLL035W	QCR2	P07257	368 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	RIP1	P08067	215 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	GAL7	P08431	366 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	UBI4	P0CG63	381 aa	Known RBP	4.03	□□□□□ -1.77
GRC3	YLL035W	SCL1	P21243	252 aa	Known RBP	4.03	□□□□□ -1.77
GRC3	YLL035W	RBK1	P25332	333 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	YCL068C	P25593	260 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	MNS1	P32906	549 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	TIP20	P33891	701 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	TSL1	P38427	1098 aa	Known RBP	4.03	□□□□□ -1.77
GRC3	YLL035W	CUE1	P38428	203 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	WSS1	P38838	269 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	MET30	P39014	640 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	SNU13	P39990	126 aa	Known RBP	4.03	□□□□□ -1.77
GRC3	YLL035W	AVT7	P40501	490 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	GPI14	P47088	403 aa	Known RBP	4.03	□□□□□ -1.77
GRC3	YLL035W	YIF1	P53845	314 aa	Known RBP	4.03	□□□□□ -1.77
GRC3	YLL035W	PDR16	P53860	351 aa	Known RBP	4.03	□□□□□ -1.77
GRC3	YLL035W	ROY1	Q04847	553 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	TDA6	Q06466	467 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	CTR3	Q06686	241 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	YLR030W	Q07967	263 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	PLB3	Q08108	686 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	THI72	Q08579	599 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	RDR1	Q08904	546 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	AIM45	Q12480	344 aa	Known RBP	4.03	□□□□□ -1.77
GRC3	YLL035W	YIR021W-A	Q3E739	70 aa		4.03	□□□□□ -1.77
GRC3	YLL035W	ILV1	P00927	576 aa	Known RBP	4.02	□□□□□ -1.77
GRC3	YLL035W	MES1	P00958	751 aa	Known RBP	4.02	□□□□□ -1.77
GRC3	YLL035W	PHO2	P07269	559 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	MSF1	P08425	469 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	RPL40A	P0CH08	128 aa	Known RBP	4.02	□□□□□ -1.77
GRC3	YLL035W	RPL40B	P0CH09	128 aa	Known RBP	4.02	□□□□□ -1.77
GRC3	YLL035W	TIR1	P10863	254 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	RIP-Chip
GRC3	YLL035W	ERS1	P17261	260 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	RPB5	P20434	215 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	ADH7	P25377	361 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	URK1	P27515	501 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	ERV1	P27882	189 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	HXT4	P32467	576 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	GLC7	P32598	312 aa	Known RBP	4.02	□□□□□ -1.77
GRC3	YLL035W	UTR5	P32630	166 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	COX13	P32799	129 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	MAC1	P35192	417 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	LDB7	P38210	180 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	YIL165C	P40446	119 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	YJL163C	P46996	555 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	HNT2	P49775	206 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	THG1	P53215	237 aa	Known RBP	4.02	□□□□□ -1.77
GRC3	YLL035W	ELC1	Q03071	99 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	CCE1	Q03702	353 aa		4.02	□□□□□ -1.77
GRC3	YLL035W	PKR1	Q03880	122 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms