RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W YOX1P34161 385 aa3.15□□□□□ -1.9
UBP12YJL197W HMT1P38074 348 aa3.15□□□□□ -1.9
UBP12YJL197W ATG18P43601 500 aa3.15□□□□□ -1.9
UBP12YJL197W BXI1P48558 297 aa3.15□□□□□ -1.9
UBP12YJL197W SYF2P53277 215 aaPredicted RBP3.15□□□□□ -1.9
UBP12YJL197W YML108WQ03759 105 aa3.15□□□□□ -1.9
UBP12YJL197W SYC1Q08553 188 aaPredicted RBP3.15□□□□□ -1.9
UBP12YJL197W GCN3P14741 305 aa3.15□□□□□ -1.91
UBP12YJL197W NUF2P33895 451 aa3.15□□□□□ -1.91
UBP12YJL197W SEN34P39707 275 aa3.15□□□□□ -1.91
UBP12YJL197W EGT2P42835 1041 aa3.15□□□□□ -1.91
UBP12YJL197W BNS1P50084 137 aa3.15□□□□□ -1.91
UBP12YJL197W WSC2P53832 503 aa3.15□□□□□ -1.91
UBP12YJL197W GGA1Q06336 557 aa3.15□□□□□ -1.91
UBP12YJL197W YNL162W-AQ3E7A8 72 aa3.15□□□□□ -1.91
UBP12YJL197W PEX2P32800 271 aa3.14□□□□□ -1.91
UBP12YJL197W YHL049CP38722 271 aa3.14□□□□□ -1.91
UBP12YJL197W SEO1P39709 593 aa3.14□□□□□ -1.91
UBP12YJL197W YLR053CQ12026 108 aa3.14□□□□□ -1.91
UBP12YJL197W ECM33P38248 429 aaKnown RBP3.14□□□□□ -1.91
UBP12YJL197W SHE3P38272 425 aaKnown RBP3.14□□□□□ -1.91
UBP12YJL197W GTR2P53290 341 aa3.14□□□□□ -1.91
UBP12YJL197W NOC4Q06512 552 aaPredicted RBP3.14□□□□□ -1.91
UBP12YJL197W ARR2Q06597 130 aa3.14□□□□□ -1.91
UBP12YJL197W USB1Q12208 290 aaKnown RBP3.14□□□□□ -1.91
UBP12YJL197W EMP46Q12396 444 aa3.14□□□□□ -1.91
UBP12YJL197W LSO2Q3E772 92 aaKnown RBP3.14□□□□□ -1.91
UBP12YJL197W YOL163WP0CF20 169 aa3.14□□□□□ -1.91
UBP12YJL197W SRY1P36007 326 aa3.14□□□□□ -1.91
UBP12YJL197W FRM2P37261 193 aa3.14□□□□□ -1.91
UBP12YJL197W DER1P38307 211 aa3.14□□□□□ -1.91
UBP12YJL197W MIG2P53035 382 aa3.14□□□□□ -1.91
UBP12YJL197W AAH1P53909 347 aa3.14□□□□□ -1.91
UBP12YJL197W YNL046WP53956 172 aa3.14□□□□□ -1.91
UBP12YJL197W YDR124WQ04608 324 aa3.14□□□□□ -1.91
UBP12YJL197W YMR315WQ04869 349 aaKnown RBP3.14□□□□□ -1.91
UBP12YJL197W TIR4Q12218 487 aaPredicted RBP3.14□□□□□ -1.91
UBP12YJL197W YDL085C-AQ3E7B7 68 aaKnown RBP3.14□□□□□ -1.91
UBP12YJL197W DBF2P22204 572 aa3.13□□□□□ -1.91
UBP12YJL197W FAR7P43592 221 aa3.13□□□□□ -1.91
UBP12YJL197W NNT1Q05874 261 aa3.13□□□□□ -1.91
UBP12YJL197W YLR177WQ06251 628 aa3.13□□□□□ -1.91
UBP12YJL197W IRC25Q07951 179 aa3.13□□□□□ -1.91
UBP12YJL197W YOR186WQ08560 144 aa3.13□□□□□ -1.91
UBP12YJL197W CDC28P00546 298 aaKnown RBP3.13□□□□□ -1.91
UBP12YJL197W CPT1P17898 393 aa3.13□□□□□ -1.91
UBP12YJL197W YCR043CP25361 127 aa3.13□□□□□ -1.91
UBP12YJL197W ECM13P38195 257 aa3.13□□□□□ -1.91
UBP12YJL197W XBP1P40489 647 aa3.13□□□□□ -1.91
UBP12YJL197W AVT7P40501 490 aa3.13□□□□□ -1.91
UBP12YJL197W BIR1P47134 954 aa3.13□□□□□ -1.91
UBP12YJL197W CRH1P53301 507 aa3.13□□□□□ -1.91
UBP12YJL197W YDC1Q02896 317 aa3.13□□□□□ -1.91
UBP12YJL197W YLR036CQ07986 203 aa3.13□□□□□ -1.91
UBP12YJL197W DPM1P14020 267 aaKnown RBP3.13□□□□□ -1.91
UBP12YJL197W GOT1Q03554 138 aa3.13□□□□□ -1.91
UBP12YJL197W NOT5Q12514 560 aaPredicted RBP3.13□□□□□ -1.91
UBP12YJL197W ECM14P38836 430 aa3.12□□□□□ -1.91
UBP12YJL197W SNA4Q07549 140 aa3.12□□□□□ -1.91
UBP12YJL197W FDH1Q08911 376 aa3.12□□□□□ -1.91
UBP12YJL197W TRM10Q12400 293 aa3.12□□□□□ -1.91
UBP12YJL197W IZH2Q12442 317 aa3.12□□□□□ -1.91
UBP12YJL197W TCB3Q03640 1545 aaKnown RBP3.12□□□□□ -1.91
UBP12YJL197W PSK1P31374 1356 aa3.12□□□□□ -1.91
UBP12YJL197W COX5AP00424 153 aa3.12□□□□□ -1.91
UBP12YJL197W BGL2P15703 313 aaKnown RBP3.12□□□□□ -1.91
UBP12YJL197W ARO2P28777 376 aaKnown RBP3.12□□□□□ -1.91
UBP12YJL197W CAT2P32796 670 aaKnown RBP3.12□□□□□ -1.91
UBP12YJL197W APS1P35181 156 aa3.12□□□□□ -1.91
UBP12YJL197W PEX17P40155 199 aa3.12□□□□□ -1.91
UBP12YJL197W REE1P40893 198 aa3.12□□□□□ -1.91
UBP12YJL197W MOG1P47123 218 aa3.12□□□□□ -1.91
UBP12YJL197W FMP41P53889 259 aaKnown RBP3.12□□□□□ -1.91
UBP12YJL197W RNH201P53942 307 aa3.12□□□□□ -1.91
UBP12YJL197W PHO2P07269 559 aa3.12□□□□□ -1.91
UBP12YJL197W GRX2P17695 143 aaKnown RBP3.12□□□□□ -1.91
UBP12YJL197W CSE2P33308 149 aa3.12□□□□□ -1.91
UBP12YJL197W PRY2P36110 329 aa3.12□□□□□ -1.91
UBP12YJL197W PDS1P40316 373 aaPredicted RBP3.12□□□□□ -1.91
UBP12YJL197W SOK1P40317 901 aa3.12□□□□□ -1.91
UBP12YJL197W ILM1P47155 203 aa3.12□□□□□ -1.91
UBP12YJL197W SCW4P53334 386 aaKnown RBP3.12□□□□□ -1.91
UBP12YJL197W COS6P53344 381 aa3.12□□□□□ -1.91
UBP12YJL197W YDR248CQ03786 193 aa3.12□□□□□ -1.91
UBP12YJL197W ARO80Q04052 950 aa3.12□□□□□ -1.91
UBP12YJL197W YCL021W-AQ96VH3 125 aa3.12□□□□□ -1.91
UBP12YJL197W PET20Q99373 253 aa3.12□□□□□ -1.91
UBP12YJL197W SEC4P07560 215 aaKnown RBP3.11□□□□□ -1.91
UBP12YJL197W CLG1P35190 452 aa3.11□□□□□ -1.91
UBP12YJL197W YIL067CP40514 678 aa3.11□□□□□ -1.91
UBP12YJL197W DID2P69771 204 aa3.11□□□□□ -1.91
UBP12YJL197W YPL113CQ02961 396 aa3.11□□□□□ -1.91
UBP12YJL197W GRX8Q05926 109 aa3.11□□□□□ -1.91
UBP12YJL197W RPS8AP0CX39 200 aaKnown RBP3.11□□□□□ -1.91
UBP12YJL197W RPS8BP0CX40 200 aaKnown RBP3.11□□□□□ -1.91
UBP12YJL197W POP8P38208 133 aa3.11□□□□□ -1.91
UBP12YJL197W RSM25P40496 264 aa3.11□□□□□ -1.91
UBP12YJL197W SRL1Q08673 210 aa3.11□□□□□ -1.91
UBP12YJL197W YPL278CQ08990 100 aa3.11□□□□□ -1.91
UBP12YJL197W MRS1P07266 363 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms