RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W TY1B-ML1Q04711 1755 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W TY1B-GR2Q12269 1755 aa1.67□□□□□ -2.14
MSL1YIR009W TY1B-OLQ12273 1755 aa1.67□□□□□ -2.14
MSL1YIR009W TY1B-PLQ12414 1755 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W YSP2Q06681 1438 aa1.67□□□□□ -2.14
MSL1YIR009W CDC33P07260 213 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W MATALPHA2P0CY08 210 aa1.67□□□□□ -2.14
MSL1YIR009W HMLALPHA2P0CY09 210 aa1.67□□□□□ -2.14
MSL1YIR009W RPL4AP10664 362 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W OSM1P21375 501 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W PEX3P28795 441 aa1.67□□□□□ -2.14
MSL1YIR009W ALK2P32789 676 aaPredicted RBP1.67□□□□□ -2.14
MSL1YIR009W VPS21P36017 210 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W MRPL3P36516 390 aa1.67□□□□□ -2.14
MSL1YIR009W MED8P38304 223 aa1.67□□□□□ -2.14
MSL1YIR009W PHO89P38361 574 aa1.67□□□□□ -2.14
MSL1YIR009W CUE1P38428 203 aa1.67□□□□□ -2.14
MSL1YIR009W YHL049CP38722 271 aa1.67□□□□□ -2.14
MSL1YIR009W ECM34P38728 170 aa1.67□□□□□ -2.14
MSL1YIR009W ERG28P40030 148 aa1.67□□□□□ -2.14
MSL1YIR009W YNL194CP40169 301 aa1.67□□□□□ -2.14
MSL1YIR009W YJR079WP47126 109 aa1.67□□□□□ -2.14
MSL1YIR009W RPL4BP49626 362 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W YGL118CP53132 145 aa1.67□□□□□ -2.14
MSL1YIR009W FMP41P53889 259 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W VHS1Q03785 461 aa1.67□□□□□ -2.14
MSL1YIR009W LOA1Q06508 300 aa1.67□□□□□ -2.14
MSL1YIR009W DIB1Q06819 143 aaPredicted RBP1.67□□□□□ -2.14
MSL1YIR009W YDR018CQ12185 396 aa1.67□□□□□ -2.14
MSL1YIR009W YCT1Q12235 531 aa1.67□□□□□ -2.14
MSL1YIR009W MLP2P40457 1679 aa1.67□□□□□ -2.14
MSL1YIR009W TY2B-LR1P0C2J3 1770 aa1.67□□□□□ -2.14
MSL1YIR009W TY2B-FP0CX63 1770 aa1.67□□□□□ -2.14
MSL1YIR009W TY2B-GR2P0CX64 1770 aa1.67□□□□□ -2.14
MSL1YIR009W TY2B-CP25384 1770 aa1.67□□□□□ -2.14
MSL1YIR009W TY2B-DR2Q03494 1770 aa1.67□□□□□ -2.14
MSL1YIR009W TY1B-DR1Q03855 1755 aa1.67□□□□□ -2.14
MSL1YIR009W TY2B-DR3Q07791 1770 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W TY2B-OR1Q12113 1770 aa1.67□□□□□ -2.14
MSL1YIR009W TY2B-DR1Q12472 1770 aa1.67□□□□□ -2.14
MSL1YIR009W TY2B-OR2Q12501 1770 aa1.67□□□□□ -2.14
MSL1YIR009W RAD9P14737 1309 aa1.66□□□□□ -2.14
MSL1YIR009W CDC10P25342 322 aaKnown RBP1.66□□□□□ -2.14
MSL1YIR009W YCR102CP25608 368 aa1.66□□□□□ -2.14
MSL1YIR009W IDH1P28834 360 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
MSL1YIR009W HOM6P31116 359 aaKnown RBP1.66□□□□□ -2.14
MSL1YIR009W CAT2P32796 670 aaKnown RBP1.66□□□□□ -2.14
MSL1YIR009W POP8P38208 133 aa1.66□□□□□ -2.14
MSL1YIR009W YBR096WP38256 230 aa1.66□□□□□ -2.14
MSL1YIR009W SHE3P38272 425 aaKnown RBP1.66□□□□□ -2.14
MSL1YIR009W EFM1P38732 585 aa1.66□□□□□ -2.14
MSL1YIR009W RTC3P38804 111 aaPredicted RBP1.66□□□□□ -2.14
MSL1YIR009W COX15P40086 486 aa1.66□□□□□ -2.14
MSL1YIR009W DSN1P40568 576 aa1.66□□□□□ -2.14
MSL1YIR009W YFL064CP43540 174 aa1.66□□□□□ -2.14
MSL1YIR009W SNZ3P43545 298 aa1.66□□□□□ -2.14
MSL1YIR009W NBP35P52920 328 aa1.66□□□□□ -2.14
MSL1YIR009W CAX4P53223 239 aa1.66□□□□□ -2.14
MSL1YIR009W SNZ2P53824 298 aa1.66□□□□□ -2.14
MSL1YIR009W YPR147CQ06522 304 aaKnown RBP1.66□□□□□ -2.14
MSL1YIR009W GET4Q12125 312 aa1.66□□□□□ -2.14
MSL1YIR009W YLR126CQ12288 251 aa1.66□□□□□ -2.14
MSL1YIR009W AI5_BETAQ9ZZX0 354 aa1.66□□□□□ -2.14
MSL1YIR009W PSK1P31374 1356 aa1.66□□□□□ -2.14
MSL1YIR009W VPS13Q07878 3144 aa1.66□□□□□ -2.14
MSL1YIR009W GEA1P47102 1408 aaPredicted RBP1.66□□□□□ -2.14
MSL1YIR009W RPL28P02406 149 aaKnown RBP1.65□□□□□ -2.15
MSL1YIR009W YBR121C-AP0C5L4 52 aa1.65□□□□□ -2.15
MSL1YIR009W TIP20P33891 701 aa1.65□□□□□ -2.15
MSL1YIR009W MRPL27P36526 146 aaPredicted RBP1.65□□□□□ -2.15
MSL1YIR009W YBL081WP38180 368 aaKnown RBP1.65□□□□□ -2.15
MSL1YIR009W FZO1P38297 855 aa1.65□□□□□ -2.15
MSL1YIR009W RFC4P40339 323 aaKnown RBP1.65□□□□□ -2.15
MSL1YIR009W YIL054WP40524 105 aa1.65□□□□□ -2.15
MSL1YIR009W RPE1P46969 238 aa1.65□□□□□ -2.15
MSL1YIR009W RPC17P47076 161 aa1.65□□□□□ -2.15
MSL1YIR009W CWC23P52868 283 aaPredicted RBP1.65□□□□□ -2.15
MSL1YIR009W ALG13P53178 202 aa1.65□□□□□ -2.15
MSL1YIR009W YGR018CP53211 109 aa1.65□□□□□ -2.15
MSL1YIR009W SWT21P53873 357 aaPredicted RBP1.65□□□□□ -2.15
MSL1YIR009W MRPS17Q03246 237 aaPredicted RBP1.65□□□□□ -2.15
MSL1YIR009W SDC1Q03323 175 aa1.65□□□□□ -2.15
MSL1YIR009W CDC123Q05791 360 aa1.65□□□□□ -2.15
MSL1YIR009W ATG17Q06410 417 aa1.65□□□□□ -2.15
MSL1YIR009W HEM25Q07534 307 aa1.65□□□□□ -2.15
MSL1YIR009W CSM4Q08955 156 aa1.65□□□□□ -2.15
MSL1YIR009W YPL150WQ12152 901 aa1.65□□□□□ -2.15
MSL1YIR009W TIR4Q12218 487 aaPredicted RBP1.65□□□□□ -2.15
MSL1YIR009W TRM10Q12400 293 aa1.65□□□□□ -2.15
MSL1YIR009W YKL183C-AQ3E765 70 aa1.65□□□□□ -2.15
MSL1YIR009W YAL063C-AQ3E791 96 aa1.65□□□□□ -2.15
MSL1YIR009W SEY1Q99287 776 aa1.65□□□□□ -2.15
MSL1YIR009W CAT8P39113 1433 aa1.65□□□□□ -2.15
MSL1YIR009W YDR157WA0A023PZE8 133 aa1.64□□□□□ -2.15
MSL1YIR009W HTB1P02293 131 aaKnown RBP1.64□□□□□ -2.15
MSL1YIR009W HTB2P02294 131 aa1.64□□□□□ -2.15
MSL1YIR009W YKR104WP0CE69 306 aa1.64□□□□□ -2.15
MSL1YIR009W RPO26P20435 155 aa1.64□□□□□ -2.15
MSL1YIR009W APA2P22108 325 aa1.64□□□□□ -2.15
MSL1YIR009W PPH21P23594 369 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 106.2 ms