RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C YMR265CQ03508 461 aaKnown RBP4.26□□□□□ -1.73
PAN1YIR006C TY1A-DR1Q03856 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-ML1Q04706 440 aaKnown RBP4.26□□□□□ -1.73
PAN1YIR006C HNT3Q08702 217 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-GR1Q12085 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-BRQ12217 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-DR3Q12441 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-NL2Q12470 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-GR2Q12485 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.26□□□□□ -1.73
PAN1YIR006C TY1A-OLQ92392 440 aaKnown RBP4.26□□□□□ -1.73
PAN1YIR006C SEC22P22214 214 aa4.26□□□□□ -1.73
PAN1YIR006C NUD1P32336 851 aa4.26□□□□□ -1.73
PAN1YIR006C LTP1P40347 161 aa4.26□□□□□ -1.73
PAN1YIR006C SOL1P50278 321 aa4.26□□□□□ -1.73
PAN1YIR006C DIC1Q06143 298 aa4.26□□□□□ -1.73
PAN1YIR006C ISN1Q99312 450 aa4.26□□□□□ -1.73
PAN1YIR006C BET2P20133 325 aa4.25□□□□□ -1.73
PAN1YIR006C PRE7P23724 241 aaKnown RBP4.25□□□□□ -1.73
PAN1YIR006C PPG1P32838 368 aa4.25□□□□□ -1.73
PAN1YIR006C IKI1P38874 309 aa4.25□□□□□ -1.73
PAN1YIR006C YIF1P53845 314 aaKnown RBP4.25□□□□□ -1.73
PAN1YIR006C SKO1Q02100 647 aa4.25□□□□□ -1.73
PAN1YIR006C YPL077CQ02831 240 aa4.25□□□□□ -1.73
PAN1YIR006C TMN2Q04562 672 aa4.25□□□□□ -1.73
PAN1YIR006C AIM45Q12480 344 aaKnown RBP4.25□□□□□ -1.73
PAN1YIR006C YCL001W-BQ96VH2 84 aa4.25□□□□□ -1.73
PAN1YIR006C DET1Q99288 334 aaKnown RBP4.25□□□□□ -1.73
PAN1YIR006C RPS2P25443 254 aaKnown RBP4.25□□□□□ -1.73
PAN1YIR006C IRS4P36115 615 aaKnown RBP4.25□□□□□ -1.73
PAN1YIR006C THI2P38141 450 aa4.25□□□□□ -1.73
PAN1YIR006C GAT1P43574 510 aa4.25□□□□□ -1.73
PAN1YIR006C YPR084WQ06821 456 aa4.25□□□□□ -1.73
PAN1YIR006C ATG41Q12048 136 aa4.25□□□□□ -1.73
PAN1YIR006C QCR7P00128 127 aa4.25□□□□□ -1.73
PAN1YIR006C YHC3P47040 408 aa4.25□□□□□ -1.73
PAN1YIR006C VEL1P53058 206 aa4.25□□□□□ -1.73
PAN1YIR006C MRPL1Q04599 285 aa4.25□□□□□ -1.73
PAN1YIR006C RNH1Q04740 348 aa4.25□□□□□ -1.73
PAN1YIR006C YMR084WA2P2R3 262 aa4.24□□□□□ -1.73
PAN1YIR006C LST4P34239 828 aa4.24□□□□□ -1.73
PAN1YIR006C SHM2P37291 469 aaKnown RBP4.24□□□□□ -1.73
PAN1YIR006C FIG1P38224 298 aa4.24□□□□□ -1.73
PAN1YIR006C RPA43P46669 326 aa4.24□□□□□ -1.73
PAN1YIR006C SKP1P52286 194 aa4.24□□□□□ -1.73
PAN1YIR006C MKC7P53379 596 aa4.24□□□□□ -1.73
PAN1YIR006C SAE3P89114 91 aa4.24□□□□□ -1.73
PAN1YIR006C USB1Q12208 290 aaKnown RBP4.24□□□□□ -1.73
PAN1YIR006C GLO4Q12320 285 aa4.24□□□□□ -1.73
PAN1YIR006C UBR2Q07963 1872 aa4.24□□□□□ -1.73
PAN1YIR006C YPT1P01123 206 aaKnown RBP4.24□□□□□ -1.73
PAN1YIR006C TRP4P07285 380 aaPredicted RBP4.24□□□□□ -1.73
PAN1YIR006C YIM1P28625 365 aa4.24□□□□□ -1.73
PAN1YIR006C FRM2P37261 193 aa4.24□□□□□ -1.73
PAN1YIR006C YIL108WP40483 696 aaKnown RBP4.24□□□□□ -1.73
PAN1YIR006C YIL077CP40508 320 aa4.24□□□□□ -1.73
PAN1YIR006C NAS2P40555 220 aa4.24□□□□□ -1.73
PAN1YIR006C YJL218WP40892 196 aaKnown RBP4.24□□□□□ -1.73
PAN1YIR006C CUZ1P53899 274 aa4.24□□□□□ -1.73
PAN1YIR006C TMA23Q03525 211 aa4.24□□□□□ -1.73
PAN1YIR006C LPP1Q04396 274 aa4.24□□□□□ -1.73
PAN1YIR006C ALG6Q12001 544 aaKnown RBP4.24□□□□□ -1.73
PAN1YIR006C SWM1Q12379 170 aa4.24□□□□□ -1.73
PAN1YIR006C FRE6Q12473 712 aa4.24□□□□□ -1.73
PAN1YIR006C RPL1AP0CX43 217 aaKnown RBP4.24□□□□□ -1.73
PAN1YIR006C RPL1BP0CX44 217 aaKnown RBP4.24□□□□□ -1.73
PAN1YIR006C MAC1P35192 417 aa4.24□□□□□ -1.73
PAN1YIR006C UPS2P35200 230 aa4.24□□□□□ -1.73
PAN1YIR006C ATG8P38182 117 aaRIP-Chip data4.24□□□□□ -1.73not detected
PAN1YIR006C ARC40P38328 384 aaKnown RBP4.24□□□□□ -1.73
PAN1YIR006C OCA5P38738 679 aa4.24□□□□□ -1.73
PAN1YIR006C YPL014WQ02606 381 aa4.24□□□□□ -1.73
PAN1YIR006C HRI1Q05905 244 aaKnown RBP4.24□□□□□ -1.73
PAN1YIR006C IRC13Q08630 104 aa4.24□□□□□ -1.73
PAN1YIR006C CTA1P15202 515 aa4.24□□□□□ -1.73
PAN1YIR006C ATS1P31386 333 aa4.24□□□□□ -1.73
PAN1YIR006C YNR061CP53747 219 aa4.24□□□□□ -1.73
PAN1YIR006C YPL067CQ02754 198 aa4.24□□□□□ -1.73
PAN1YIR006C ODC1Q03028 310 aa4.24□□□□□ -1.73
PAN1YIR006C RSM10Q03201 203 aa4.24□□□□□ -1.73
PAN1YIR006C MRPL51Q06090 140 aaPredicted RBP4.24□□□□□ -1.73
PAN1YIR006C YPR127WQ06494 345 aa4.24□□□□□ -1.73
PAN1YIR006C DFG16Q99234 619 aa4.24□□□□□ -1.73
PAN1YIR006C PHO5P00635 467 aa4.23□□□□□ -1.73
PAN1YIR006C TPI1P00942 248 aaKnown RBP4.23□□□□□ -1.73
PAN1YIR006C GAL1P04385 528 aa4.23□□□□□ -1.73
PAN1YIR006C YLL053CP0CD98 152 aa4.23□□□□□ -1.73
PAN1YIR006C GLC7P32598 312 aaKnown RBP4.23□□□□□ -1.73
PAN1YIR006C AFR1P33304 620 aa4.23□□□□□ -1.73
PAN1YIR006C CBT1P36038 271 aaPredicted RBP4.23□□□□□ -1.73
PAN1YIR006C AGX1P43567 385 aa4.23□□□□□ -1.73
PAN1YIR006C RNH201P53942 307 aa4.23□□□□□ -1.73
PAN1YIR006C NAM8Q00539 523 aaKnown RBP4.23□□□□□ -1.73
PAN1YIR006C MRPS16Q02608 121 aa4.23□□□□□ -1.73
PAN1YIR006C PIB1Q06651 286 aa4.23□□□□□ -1.73
PAN1YIR006C YOL024WQ08172 172 aa4.23□□□□□ -1.73
PAN1YIR006C CDC36P06100 191 aaPredicted RBP4.23□□□□□ -1.73
PAN1YIR006C RPL20AP0CX23 172 aaKnown RBP4.23□□□□□ -1.73
PAN1YIR006C RPL20BP0CX24 172 aaPredicted RBP4.23□□□□□ -1.73
PAN1YIR006C YGL010WP25338 174 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms