RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOT3	YIL038C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
NOT3	YIL038C	MRPL3	P36516	390 aa		4.63	□□□□□ -1.67
NOT3	YIL038C	CHK1	P38147	527 aa		4.63	□□□□□ -1.67
NOT3	YIL038C	RPS27B	P38711	82 aa		4.63	□□□□□ -1.67
NOT3	YIL038C	SWM2	P40342	146 aa		4.63	□□□□□ -1.67
NOT3	YIL038C	SEH1	P53011	349 aa	Known RBP	4.63	□□□□□ -1.67
NOT3	YIL038C	RRN9	P53437	365 aa		4.63	□□□□□ -1.67
NOT3	YIL038C	DML1	Q03652	475 aa		4.63	□□□□□ -1.67
NOT3	YIL038C	MRPL35	Q06678	367 aa		4.63	□□□□□ -1.67
NOT3	YIL038C	YPR1	Q12458	312 aa		4.63	□□□□□ -1.67
NOT3	YIL038C	SAL1	D6W196	494 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	RPL6B	P05739	176 aa	Known RBP	4.62	□□□□□ -1.67
NOT3	YIL038C	NHP6B	P11633	99 aa	Known RBP	4.62	□□□□□ -1.67
NOT3	YIL038C	ITR1	P30605	584 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	MAL32	P38158	584 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	AIM3	P38266	947 aa	Known RBP	4.62	□□□□□ -1.67
NOT3	YIL038C	SLM1	P40485	686 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	ABM1	P47146	123 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	MRH4	P53166	561 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	PCP1	P53259	346 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	RPL6A	Q02326	176 aa	Known RBP	4.62	□□□□□ -1.67
NOT3	YIL038C	CTL1	Q03220	320 aa	Known RBP	4.62	□□□□□ -1.67
NOT3	YIL038C	RVB1	Q03940	463 aa	Known RBP	4.62	□□□□□ -1.67
NOT3	YIL038C	BTS1	Q12051	335 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	SPC3	Q12133	184 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	RPL20A	P0CX23	172 aa	Known RBP	4.62	□□□□□ -1.67
NOT3	YIL038C	RPL20B	P0CX24	172 aa	Predicted RBP	4.62	□□□□□ -1.67
NOT3	YIL038C	NDC1	P32500	655 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	PTR2	P32901	601 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	SER2	P42941	309 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	NRM1	P53718	249 aa		4.62	□□□□□ -1.67
NOT3	YIL038C	YEL009C-A	A0A023PZF2	135 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	SPS4	P09937	338 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	PET54	P10834	293 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	NAM2	P11325	894 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	UTR1	P21373	530 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	YCR006C	P25350	157 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	BOS1	P25385	244 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	ZRT3	P34240	503 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	MIA40	P36046	403 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	WSS1	P38838	269 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	GAT2	P40209	560 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	SYS1	P41544	203 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	RPA34	P47006	233 aa	Predicted RBP	4.61	□□□□□ -1.67
NOT3	YIL038C	RMD9	P53140	646 aa	Known RBP	4.61	□□□□□ -1.67
NOT3	YIL038C	PGA1	P53896	198 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	HHT1	P61830	136 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	SNZ1	Q03148	297 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	IRC19	Q07843	230 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	YOR385W	Q08909	290 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	YPL199C	Q08954	240 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	SUS1	Q6WNK7	96 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	CDC36	P06100	191 aa	Predicted RBP	4.61	□□□□□ -1.67
NOT3	YIL038C	PDE2	P06776	526 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	YSF3	P0C074	85 aa	Predicted RBP	4.61	□□□□□ -1.67
NOT3	YIL038C	GCN3	P14741	305 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	DAL82	P21705	255 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	LDB16	P25587	256 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	SFK1	P35735	353 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	PAU24	P38155	120 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	YHK8	P38776	514 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	SPG5	P42933	373 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	TPC1	P53257	314 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	YPL039W	Q03080	316 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	PAL1	Q05518	499 aa	Known RBP	4.61	□□□□□ -1.67
NOT3	YIL038C	MCH4	Q08268	501 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	FSH3	Q99369	266 aa		4.61	□□□□□ -1.67
NOT3	YIL038C	TIM9	O74700	87 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
NOT3	YIL038C	PRM5	P40476	318 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	YLR283W	Q05867	314 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	TPO3	Q06451	622 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	YPR147C	Q06522	304 aa	Known RBP	4.6	□□□□□ -1.67
NOT3	YIL038C	AKR2	Q12013	749 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	RPL12A	P0CX53	165 aa	Known RBP	4.6	□□□□□ -1.67
NOT3	YIL038C	RPL12B	P0CX54	165 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	URE2	P23202	354 aa	Known RBP	4.6	□□□□□ -1.67
NOT3	YIL038C	IFM1	P25038	676 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	CPR4	P25334	318 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	YEF1	P32622	495 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	SOF1	P33750	489 aa	Known RBP	4.6	□□□□□ -1.67
NOT3	YIL038C	CUP9	P41817	306 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	IRC18	P47056	224 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	YJR141W	P47172	347 aa	Predicted RBP	4.6	□□□□□ -1.67
NOT3	YIL038C	CWC23	P52868	283 aa	Predicted RBP	4.6	□□□□□ -1.67
NOT3	YIL038C	YOR343C	Q12484	108 aa		4.6	□□□□□ -1.67
NOT3	YIL038C	YPK2	P18961	677 aa		4.59	□□□□□ -1.67
NOT3	YIL038C	TRR1	P29509	319 aa	Known RBP	4.59	□□□□□ -1.67
NOT3	YIL038C	CLG1	P35190	452 aa		4.59	□□□□□ -1.67
NOT3	YIL038C	SDS24	P38314	527 aa		4.59	□□□□□ -1.67
NOT3	YIL038C	IPI1	P38803	334 aa	Predicted RBP	4.59	□□□□□ -1.67
NOT3	YIL038C	UTP25	P40498	721 aa	Known RBP	4.59	□□□□□ -1.67
NOT3	YIL038C	YAR1	P46683	200 aa		4.59	□□□□□ -1.67
NOT3	YIL038C	SCS7	Q03529	384 aa		4.59	□□□□□ -1.67
NOT3	YIL038C	YPR053C	Q6Q5F3	151 aa		4.59	□□□□□ -1.67
NOT3	YIL038C	TAO3	P40468	2376 aa		4.59	□□□□□ -1.67
NOT3	YIL038C	HIS3	P06633	220 aa		4.58	□□□□□ -1.68
NOT3	YIL038C	ERD2	P18414	219 aa		4.58	□□□□□ -1.68
NOT3	YIL038C	HXT2	P23585	541 aa		4.58	□□□□□ -1.68
NOT3	YIL038C	PUT3	P25502	979 aa	Predicted RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms