RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W YOR343CQ12484 108 aa4.45□□□□□ -1.7
MSH1YHR120W PRM4Q12498 284 aa4.45□□□□□ -1.7
MSH1YHR120W ADK1P07170 222 aaKnown RBP4.44□□□□□ -1.7
MSH1YHR120W MATALPHA1P0CY06 175 aa4.44□□□□□ -1.7
MSH1YHR120W HMLALPHA1P0CY07 175 aa4.44□□□□□ -1.7
MSH1YHR120W RPB8P20436 146 aa4.44□□□□□ -1.7
MSH1YHR120W TRS65P32893 560 aa4.44□□□□□ -1.7
MSH1YHR120W GPX1P36014 167 aa4.44□□□□□ -1.7
MSH1YHR120W MRPL27P36526 146 aaPredicted RBP4.44□□□□□ -1.7
MSH1YHR120W CHK1P38147 527 aa4.44□□□□□ -1.7
MSH1YHR120W SFH5P47008 294 aa4.44□□□□□ -1.7
MSH1YHR120W VHT1P53241 593 aa4.44□□□□□ -1.7
MSH1YHR120W YNR062CP53748 327 aa4.44□□□□□ -1.7
MSH1YHR120W ODC1Q03028 310 aa4.44□□□□□ -1.7
MSH1YHR120W CAC2Q04199 468 aa4.44□□□□□ -1.7
MSH1YHR120W VBA4Q04602 768 aaKnown RBP4.44□□□□□ -1.7
MSH1YHR120W YAL064W-BO13512 126 aa4.44□□□□□ -1.7
MSH1YHR120W YLR358CO13565 187 aa4.44□□□□□ -1.7
MSH1YHR120W MCM1P11746 286 aa4.44□□□□□ -1.7
MSH1YHR120W SEC22P22214 214 aa4.44□□□□□ -1.7
MSH1YHR120W STE50P25344 346 aa4.44□□□□□ -1.7
MSH1YHR120W SRB6P32570 121 aa4.44□□□□□ -1.7
MSH1YHR120W MSN4P33749 630 aa4.44□□□□□ -1.7
MSH1YHR120W TAD2P47058 250 aa4.44□□□□□ -1.7
MSH1YHR120W SRB7P47822 140 aa4.44□□□□□ -1.7
MSH1YHR120W MSY1P48527 492 aa4.44□□□□□ -1.7
MSH1YHR120W TYW3P53177 273 aa4.44□□□□□ -1.7
MSH1YHR120W NRK1P53915 240 aa4.44□□□□□ -1.7
MSH1YHR120W MRPL1Q04599 285 aa4.44□□□□□ -1.7
MSH1YHR120W DCS1Q06151 350 aa4.44□□□□□ -1.7
MSH1YHR120W FOL3Q12676 427 aaPredicted RBP4.44□□□□□ -1.7
MSH1YHR120W VMA9Q3E7B6 73 aa4.44□□□□□ -1.7
MSH1YHR120W NUP1P20676 1076 aa4.43□□□□□ -1.7
MSH1YHR120W SUA5P32579 426 aa4.43□□□□□ -1.7
MSH1YHR120W ISC10P32645 267 aa4.43□□□□□ -1.7
MSH1YHR120W SRY1P36007 326 aa4.43□□□□□ -1.7
MSH1YHR120W COS9P36034 407 aa4.43□□□□□ -1.7
MSH1YHR120W EDS1P38073 919 aa4.43□□□□□ -1.7
MSH1YHR120W GCV3P39726 170 aaPredicted RBP4.43□□□□□ -1.7
MSH1YHR120W SLS1P42900 643 aa4.43□□□□□ -1.7
MSH1YHR120W CDC36P06100 191 aaPredicted RBP4.43□□□□□ -1.7
MSH1YHR120W HEM4P06174 275 aa4.43□□□□□ -1.7
MSH1YHR120W GCD1P09032 578 aaPredicted RBP4.43□□□□□ -1.7
MSH1YHR120W MRPL39P36533 70 aa4.43□□□□□ -1.7
MSH1YHR120W MTC6P38849 526 aa4.43□□□□□ -1.7
MSH1YHR120W ASP1P38986 381 aaPredicted RBP4.43□□□□□ -1.7
MSH1YHR120W PHO90P39535 881 aa4.43□□□□□ -1.7
MSH1YHR120W YJR120WP47157 116 aa4.43□□□□□ -1.7
MSH1YHR120W MTM1P53320 366 aa4.43□□□□□ -1.7
MSH1YHR120W GIM3P53900 129 aa4.43□□□□□ -1.7
MSH1YHR120W YMR265CQ03508 461 aaKnown RBP4.43□□□□□ -1.7
MSH1YHR120W COQ11Q05892 277 aa4.43□□□□□ -1.7
MSH1YHR120W YPR147CQ06522 304 aaKnown RBP4.43□□□□□ -1.7
MSH1YHR120W SDO1Q07953 250 aaKnown RBP4.43□□□□□ -1.7
MSH1YHR120W MRPL33P20084 86 aa4.43□□□□□ -1.7
MSH1YHR120W PRE2P30656 287 aaKnown RBP4.43□□□□□ -1.7
MSH1YHR120W SEN34P39707 275 aa4.43□□□□□ -1.7
MSH1YHR120W SSO2P39926 295 aa4.43□□□□□ -1.7
MSH1YHR120W AVT7P40501 490 aa4.43□□□□□ -1.7
MSH1YHR120W YIL060WP40519 144 aa4.43□□□□□ -1.7
MSH1YHR120W OTU1P43558 301 aa4.43□□□□□ -1.7
MSH1YHR120W YGL159WP53110 370 aa4.43□□□□□ -1.7
MSH1YHR120W NMA1Q06178 401 aaKnown RBP4.43□□□□□ -1.7
MSH1YHR120W RRI1Q12468 440 aa4.43□□□□□ -1.7
MSH1YHR120W ISN1Q99312 450 aa4.43□□□□□ -1.7
MSH1YHR120W TDH2P00358 332 aaKnown RBP4.42□□□□□ -1.7
MSH1YHR120W PRB1P09232 635 aa4.42□□□□□ -1.7
MSH1YHR120W RPI1P23250 407 aaKnown RBP4.42□□□□□ -1.7
MSH1YHR120W LNP1P38878 278 aa4.42□□□□□ -1.7
MSH1YHR120W NIF3P53081 288 aa4.42□□□□□ -1.7
MSH1YHR120W RSM27P53305 110 aa4.42□□□□□ -1.7
MSH1YHR120W API2Q04413 109 aa4.42□□□□□ -1.7
MSH1YHR120W DXO1Q06349 442 aa4.42□□□□□ -1.7
MSH1YHR120W NIP7Q08962 181 aaKnown RBP4.42□□□□□ -1.7
MSH1YHR120W YDL180WQ12301 547 aa4.42□□□□□ -1.7
MSH1YHR120W CDC39P25655 2108 aaKnown RBP4.42□□□□□ -1.7
MSH1YHR120W YKL162CP36052 402 aa4.42□□□□□ -1.7
MSH1YHR120W AIM3P38266 947 aaKnown RBP4.42□□□□□ -1.7
MSH1YHR120W LAG1P38703 411 aa4.42□□□□□ -1.7
MSH1YHR120W IKI1P38874 309 aa4.42□□□□□ -1.7
MSH1YHR120W NAS2P40555 220 aa4.42□□□□□ -1.7
MSH1YHR120W SAM37P50110 327 aa4.42□□□□□ -1.7
MSH1YHR120W PHO23P50947 330 aa4.42□□□□□ -1.7
MSH1YHR120W SCW4P53334 386 aaKnown RBP4.42□□□□□ -1.7
MSH1YHR120W NOC4Q06512 552 aaPredicted RBP4.42□□□□□ -1.7
MSH1YHR120W RAF1Q06891 181 aa4.42□□□□□ -1.7
MSH1YHR120W HRT1Q08273 121 aa4.42□□□□□ -1.7
MSH1YHR120W ORT1Q12375 292 aa4.42□□□□□ -1.7
MSH1YHR120W HBN1Q96VH4 193 aa4.42□□□□□ -1.7
MSH1YHR120W MCM10P32354 571 aa4.41□□□□□ -1.7
MSH1YHR120W RPD3P32561 433 aa4.41□□□□□ -1.7
MSH1YHR120W FMT1P32785 401 aa4.41□□□□□ -1.7
MSH1YHR120W SOF1P33750 489 aaKnown RBP4.41□□□□□ -1.7
MSH1YHR120W MRPL36P36531 177 aa4.41□□□□□ -1.7
MSH1YHR120W MRPL16P38064 232 aa4.41□□□□□ -1.7
MSH1YHR120W POG1P40473 351 aa4.41□□□□□ -1.7
MSH1YHR120W GPI14P47088 403 aaKnown RBP4.41□□□□□ -1.7
MSH1YHR120W BRR6P53062 197 aa4.41□□□□□ -1.7
MSH1YHR120W SYM1Q06563 197 aa4.41□□□□□ -1.7
MSH1YHR120W YPD1Q07688 167 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms