RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C CSM1P25651 190 aa2.86□□□□□ -1.95
XRN1YGL173C CHK1P38147 527 aa2.86□□□□□ -1.95
XRN1YGL173C GEP4P38812 185 aa2.86□□□□□ -1.95
XRN1YGL173C LSM4P40070 187 aaKnown RBP2.86□□□□□ -1.95
XRN1YGL173C PAN6P40459 309 aa2.86□□□□□ -1.95
XRN1YGL173C IMP4P53941 290 aaKnown RBP2.86□□□□□ -1.95
XRN1YGL173C PKR1Q03880 122 aaKnown RBP2.86□□□□□ -1.95
XRN1YGL173C GAT3Q07928 141 aa2.86□□□□□ -1.95
XRN1YGL173C DDC1Q08949 612 aa2.86□□□□□ -1.95
XRN1YGL173C YLR046CQ12253 270 aa2.86□□□□□ -1.95
XRN1YGL173C ECM29P38737 1868 aa2.86□□□□□ -1.95
XRN1YGL173C COS2P0CX12 379 aa2.86□□□□□ -1.95
XRN1YGL173C COS3P0CX13 379 aa2.86□□□□□ -1.95
XRN1YGL173C POP5P28005 173 aa2.86□□□□□ -1.95
XRN1YGL173C YER186CP40101 306 aa2.86□□□□□ -1.95
XRN1YGL173C COS4P43542 379 aa2.86□□□□□ -1.95
XRN1YGL173C YGL039WP53183 348 aaKnown RBP2.86□□□□□ -1.95
XRN1YGL173C SPR6Q01684 191 aa2.86□□□□□ -1.95
XRN1YGL173C NKP2Q06162 153 aa2.86□□□□□ -1.95
XRN1YGL173C TPO3Q06451 622 aa2.86□□□□□ -1.95
XRN1YGL173C SEN1Q00416 2231 aaKnown RBP2.86□□□□□ -1.95
XRN1YGL173C OPI3P05375 206 aa2.85□□□□□ -1.95
XRN1YGL173C MDM10P18409 493 aa2.85□□□□□ -1.95
XRN1YGL173C SCL1P21243 252 aaKnown RBP2.85□□□□□ -1.95
XRN1YGL173C IDH1P28834 360 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
XRN1YGL173C SEC1P30619 724 aaKnown RBP2.85□□□□□ -1.95
XRN1YGL173C KTI12P34253 313 aaKnown RBP2.85□□□□□ -1.95
XRN1YGL173C TVP38P36164 337 aa2.85□□□□□ -1.95
XRN1YGL173C PRM8P53174 237 aa2.85□□□□□ -1.95
XRN1YGL173C SEC13Q04491 297 aaKnown RBP2.85□□□□□ -1.95
XRN1YGL173C HNT3Q08702 217 aa2.85□□□□□ -1.95
XRN1YGL173C GPM2Q12008 311 aa2.85□□□□□ -1.95
XRN1YGL173C FRE8Q12209 686 aa2.85□□□□□ -1.95
XRN1YGL173C MCT1Q12283 360 aa2.85□□□□□ -1.95
XRN1YGL173C GIT1P25346 518 aa2.85□□□□□ -1.95
XRN1YGL173C TMT1P32643 299 aa2.85□□□□□ -1.95
XRN1YGL173C ATO2P32907 282 aa2.85□□□□□ -1.95
XRN1YGL173C YBR137WP38276 179 aa2.85□□□□□ -1.95
XRN1YGL173C PCP1P53259 346 aa2.85□□□□□ -1.95
XRN1YGL173C MTM1P53320 366 aa2.85□□□□□ -1.95
XRN1YGL173C ERG13P54839 491 aaKnown RBP2.85□□□□□ -1.95
XRN1YGL173C PLB3Q08108 686 aa2.85□□□□□ -1.95
XRN1YGL173C OSW1Q08692 278 aa2.85□□□□□ -1.95
XRN1YGL173C YPL150WQ12152 901 aa2.85□□□□□ -1.95
XRN1YGL173C RRP42Q12277 265 aaPredicted RBP2.85□□□□□ -1.95
XRN1YGL173C YBR096WP38256 230 aa2.85□□□□□ -1.95
XRN1YGL173C SDS24P38314 527 aa2.85□□□□□ -1.95
XRN1YGL173C GIM4P40005 111 aaKnown RBP2.85□□□□□ -1.95
XRN1YGL173C NIF3P53081 288 aa2.85□□□□□ -1.95
XRN1YGL173C YNL046WP53956 172 aa2.85□□□□□ -1.95
XRN1YGL173C PRM15Q03262 622 aa2.85□□□□□ -1.95
XRN1YGL173C YDL109CQ12103 647 aa2.85□□□□□ -1.95
XRN1YGL173C SET6Q12529 373 aa2.85□□□□□ -1.95
XRN1YGL173C ZWF1P11412 505 aaKnown RBP2.85□□□□□ -1.95
XRN1YGL173C YHL049CP38722 271 aa2.85□□□□□ -1.95
XRN1YGL173C ECM14P38836 430 aa2.85□□□□□ -1.95
XRN1YGL173C MDV1P47025 714 aa2.85□□□□□ -1.95
XRN1YGL173C TOS8P53147 276 aa2.85□□□□□ -1.95
XRN1YGL173C POP6P53218 158 aa2.85□□□□□ -1.95
XRN1YGL173C CDC14Q00684 551 aa2.85□□□□□ -1.95
XRN1YGL173C SPG4Q04438 115 aa2.85□□□□□ -1.95
XRN1YGL173C YDR124WQ04608 324 aa2.85□□□□□ -1.95
XRN1YGL173C RAX2Q12465 1220 aa2.85□□□□□ -1.95
XRN1YGL173C UBP5P39944 805 aa2.84□□□□□ -1.95
XRN1YGL173C COG3P40094 801 aa2.84□□□□□ -1.95
XRN1YGL173C TDA4P47153 279 aa2.84□□□□□ -1.95
XRN1YGL173C YET2Q04210 160 aa2.84□□□□□ -1.95
XRN1YGL173C YOR186WQ08560 144 aa2.84□□□□□ -1.95
XRN1YGL173C MDM32Q12171 622 aa2.84□□□□□ -1.95
XRN1YGL173C IPP1P00817 287 aaKnown RBP2.84□□□□□ -1.95
XRN1YGL173C RPL15AP05748 204 aaKnown RBP2.84□□□□□ -1.95
XRN1YGL173C DPM1P14020 267 aaKnown RBP2.84□□□□□ -1.95
XRN1YGL173C ASK1P35734 292 aa2.84□□□□□ -1.95
XRN1YGL173C MRPL3P36516 390 aa2.84□□□□□ -1.95
XRN1YGL173C ISC1P40015 477 aaKnown RBP2.84□□□□□ -1.95
XRN1YGL173C KRE29P40026 464 aa2.84□□□□□ -1.95
XRN1YGL173C COG7P53195 279 aa2.84□□□□□ -1.95
XRN1YGL173C YNR066CP53752 436 aa2.84□□□□□ -1.95
XRN1YGL173C OST6Q03723 332 aa2.84□□□□□ -1.95
XRN1YGL173C DSE3Q08729 430 aa2.84□□□□□ -1.95
XRN1YGL173C FCY22Q12119 530 aa2.84□□□□□ -1.95
XRN1YGL173C WTM1Q12363 437 aaKnown RBP2.84□□□□□ -1.95
XRN1YGL173C HTZ1Q12692 134 aaKnown RBP2.84□□□□□ -1.95
XRN1YGL173C RPL23AP0CX41 137 aaKnown RBP2.84□□□□□ -1.96
XRN1YGL173C RPL23BP0CX42 137 aaKnown RBP2.84□□□□□ -1.96
XRN1YGL173C QRI5P32344 111 aa2.84□□□□□ -1.96
XRN1YGL173C ARN2P38724 620 aa2.84□□□□□ -1.96
XRN1YGL173C YJR012CP47087 207 aa2.84□□□□□ -1.96
XRN1YGL173C YPR098CQ06089 161 aa2.84□□□□□ -1.96
XRN1YGL173C CRC1Q12289 327 aa2.84□□□□□ -1.96
XRN1YGL173C MATALPHA2P0CY08 210 aa2.83□□□□□ -1.96
XRN1YGL173C HMLALPHA2P0CY09 210 aa2.83□□□□□ -1.96
XRN1YGL173C ISY1P21374 235 aaPredicted RBP2.83□□□□□ -1.96
XRN1YGL173C GAS1P22146 559 aaKnown RBP2.83□□□□□ -1.96
XRN1YGL173C SHE2P36068 246 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
XRN1YGL173C POP8P38208 133 aa2.83□□□□□ -1.96
XRN1YGL173C YER121WP40076 114 aa2.83□□□□□ -1.96
XRN1YGL173C SER33P40510 469 aa2.83□□□□□ -1.96
XRN1YGL173C YGR042WP53227 271 aa2.83□□□□□ -1.96
XRN1YGL173C HCH1P53834 153 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms