RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W EHD3P28817 500 aa1.79□□□□□ -2.12
LOC1YFR001W YJL027CP47063 138 aaPredicted RBP1.79□□□□□ -2.12
LOC1YFR001W GPI8P49018 411 aa1.79□□□□□ -2.12
LOC1YFR001W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
LOC1YFR001W RCN1P36054 211 aa1.78□□□□□ -2.12
LOC1YFR001W PRS4P38063 326 aaPredicted RBP1.78□□□□□ -2.12
LOC1YFR001W ASI3P53983 676 aa1.78□□□□□ -2.12
LOC1YFR001W ADH6Q04894 360 aaKnown RBP1.78□□□□□ -2.12
LOC1YFR001W ATG17Q06410 417 aa1.78□□□□□ -2.12
LOC1YFR001W YHR086W-AQ3E746 53 aa1.78□□□□□ -2.12
LOC1YFR001W SEC22P22214 214 aa1.77□□□□□ -2.13
LOC1YFR001W JEN1P36035 616 aa1.77□□□□□ -2.13
LOC1YFR001W SSH1P38353 490 aaKnown RBP1.77□□□□□ -2.13
LOC1YFR001W SMB1P40018 196 aaKnown RBP1.77□□□□□ -2.13
LOC1YFR001W MEP1P40260 492 aa1.77□□□□□ -2.13
LOC1YFR001W SNX4P47057 423 aa1.77□□□□□ -2.13
LOC1YFR001W YDR124WQ04608 324 aa1.77□□□□□ -2.13
LOC1YFR001W DOA4P32571 926 aa1.76□□□□□ -2.13
LOC1YFR001W RIB7P33312 244 aa1.76□□□□□ -2.13
LOC1YFR001W COS8P38723 381 aa1.76□□□□□ -2.13
LOC1YFR001W YER189WP40104 122 aa1.76□□□□□ -2.13
LOC1YFR001W SNZ3P43545 298 aa1.76□□□□□ -2.13
LOC1YFR001W BAT2P47176 376 aaKnown RBP1.76□□□□□ -2.13
LOC1YFR001W MRH4P53166 561 aa1.76□□□□□ -2.13
LOC1YFR001W MPP6P53725 186 aaPredicted RBP1.76□□□□□ -2.13
LOC1YFR001W YLR179CQ06252 201 aaKnown RBP1.76□□□□□ -2.13
LOC1YFR001W YPR147CQ06522 304 aaKnown RBP1.76□□□□□ -2.13
LOC1YFR001W COQ10Q08058 207 aa1.76□□□□□ -2.13
LOC1YFR001W RRP36Q12481 300 aaPredicted RBP1.76□□□□□ -2.13
LOC1YFR001W SWI1P09547 1314 aa1.75□□□□□ -2.13
LOC1YFR001W MSF1P08425 469 aa1.75□□□□□ -2.13
LOC1YFR001W HOM6P31116 359 aaKnown RBP1.75□□□□□ -2.13
LOC1YFR001W MRX3P38172 270 aa1.75□□□□□ -2.13
LOC1YFR001W THO1P40040 218 aaKnown RBP1.75□□□□□ -2.13
LOC1YFR001W GLG2P47011 380 aa1.75□□□□□ -2.13
LOC1YFR001W CTF19Q02732 369 aa1.75□□□□□ -2.13
LOC1YFR001W BBP1Q12365 385 aa1.75□□□□□ -2.13
LOC1YFR001W YLR462WO13556 202 aa1.74□□□□□ -2.13
LOC1YFR001W PUT1P09368 476 aa1.74□□□□□ -2.13
LOC1YFR001W YKR104WP0CE69 306 aa1.74□□□□□ -2.13
LOC1YFR001W YBR096WP38256 230 aa1.74□□□□□ -2.13
LOC1YFR001W BIG1P38813 335 aa1.74□□□□□ -2.13
LOC1YFR001W YEL075CP39972 122 aa1.74□□□□□ -2.13
LOC1YFR001W SMD3P43321 101 aaKnown RBP1.74□□□□□ -2.13
LOC1YFR001W YDR209CQ03480 137 aa1.74□□□□□ -2.13
LOC1YFR001W GOT1Q03554 138 aa1.74□□□□□ -2.13
LOC1YFR001W KAP95Q06142 861 aaKnown RBP1.74□□□□□ -2.13
LOC1YFR001W SDO1Q07953 250 aaKnown RBP1.74□□□□□ -2.13
LOC1YFR001W SYC1Q08553 188 aaPredicted RBP1.74□□□□□ -2.13
LOC1YFR001W MHT1Q12525 324 aa1.74□□□□□ -2.13
LOC1YFR001W Q0255P03881 472 aa1.73□□□□□ -2.13
LOC1YFR001W YHR032W-AP0C5N6 59 aa1.73□□□□□ -2.13
LOC1YFR001W GOS1P38736 223 aa1.73□□□□□ -2.13
LOC1YFR001W YHB1P39676 399 aaKnown RBP1.73□□□□□ -2.13
LOC1YFR001W ARC15P40518 154 aaRIP-Chip data1.73□□□□□ -2.13not detected
LOC1YFR001W SNZ2P53824 298 aa1.73□□□□□ -2.13
LOC1YFR001W BTS1Q12051 335 aa1.73□□□□□ -2.13
LOC1YFR001W ADH3P07246 375 aaKnown RBP1.72□□□□□ -2.13
LOC1YFR001W MSA2P36157 363 aa1.72□□□□□ -2.13
LOC1YFR001W YHR125WP38831 101 aa1.72□□□□□ -2.13
LOC1YFR001W SPG4Q04438 115 aa1.72□□□□□ -2.13
LOC1YFR001W YPR098CQ06089 161 aa1.72□□□□□ -2.13
LOC1YFR001W RRP40Q08285 240 aaKnown RBP1.72□□□□□ -2.13
LOC1YFR001W YOR186WQ08560 144 aa1.72□□□□□ -2.13
LOC1YFR001W RNA15P25299 296 aaPredicted RBP1.71□□□□□ -2.14
LOC1YFR001W SGE1P33335 543 aa1.71□□□□□ -2.14
LOC1YFR001W MRPL39P36533 70 aa1.71□□□□□ -2.14
LOC1YFR001W FZO1P38297 855 aa1.71□□□□□ -2.14
LOC1YFR001W USE1P53146 245 aa1.71□□□□□ -2.14
LOC1YFR001W PRM15Q03262 622 aa1.71□□□□□ -2.14
LOC1YFR001W FAR8Q05040 523 aa1.71□□□□□ -2.14
LOC1YFR001W YLR030WQ07967 263 aa1.71□□□□□ -2.14
LOC1YFR001W YOL107WQ12239 342 aa1.71□□□□□ -2.14
LOC1YFR001W RSR1P13856 272 aa1.7□□□□□ -2.14
LOC1YFR001W ERG24P32462 438 aaKnown RBP1.7□□□□□ -2.14
LOC1YFR001W RPT5P33297 434 aaKnown RBP1.7□□□□□ -2.14
LOC1YFR001W CTR2P38865 189 aa1.7□□□□□ -2.14
LOC1YFR001W YGL159WP53110 370 aa1.7□□□□□ -2.14
LOC1YFR001W YGR026WP53217 278 aa1.7□□□□□ -2.14
LOC1YFR001W DAD3P69850 94 aa1.7□□□□□ -2.14
LOC1YFR001W YMR279CQ03263 540 aa1.7□□□□□ -2.14
LOC1YFR001W RRS1Q08746 203 aaKnown RBP1.7□□□□□ -2.14
LOC1YFR001W CSM4Q08955 156 aa1.7□□□□□ -2.14
LOC1YFR001W AKR2Q12013 749 aa1.7□□□□□ -2.14
LOC1YFR001W YCT1Q12235 531 aa1.7□□□□□ -2.14
LOC1YFR001W COX5AP00424 153 aa1.69□□□□□ -2.14
LOC1YFR001W DOG1P38774 246 aa1.69□□□□□ -2.14
LOC1YFR001W AYR1P40471 297 aa1.69□□□□□ -2.14
LOC1YFR001W GTR2P53290 341 aa1.69□□□□□ -2.14
LOC1YFR001W YNL046WP53956 172 aa1.69□□□□□ -2.14
LOC1YFR001W YPR172WQ06608 200 aa1.69□□□□□ -2.14
LOC1YFR001W YOR029WQ12243 111 aa1.69□□□□□ -2.14
LOC1YFR001W BOL1Q3E793 110 aa1.69□□□□□ -2.14
LOC1YFR001W RAS2P01120 322 aaKnown RBP1.68□□□□□ -2.14
LOC1YFR001W BFR1P38934 470 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
LOC1YFR001W YFR054CP43622 192 aa1.68□□□□□ -2.14
LOC1YFR001W INM2Q05533 292 aa1.68□□□□□ -2.14
LOC1YFR001W RRT8Q08219 342 aa1.68□□□□□ -2.14
LOC1YFR001W MSH5Q12175 901 aa1.68□□□□□ -2.14
LOC1YFR001W SNU23Q12368 194 aaPredicted RBP1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms