RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C YIL177CP40434 1758 aa2.45□□□□□ -2.02
MSH4YFL003C YJL225CP40889 1758 aa2.45□□□□□ -2.02
MSH4YFL003C MRPL20P22354 195 aaPredicted RBP2.44□□□□□ -2.02
MSH4YFL003C GIT1P25346 518 aa2.44□□□□□ -2.02
MSH4YFL003C TPS2P31688 896 aaKnown RBP2.44□□□□□ -2.02
MSH4YFL003C ALK2P32789 676 aaPredicted RBP2.44□□□□□ -2.02
MSH4YFL003C PRE6P40303 254 aaKnown RBP2.44□□□□□ -2.02
MSH4YFL003C EAF6P47128 113 aa2.44□□□□□ -2.02
MSH4YFL003C MIC26P50087 233 aa2.44□□□□□ -2.02
MSH4YFL003C YGR015CP53208 328 aa2.44□□□□□ -2.02
MSH4YFL003C CTF19Q02732 369 aa2.44□□□□□ -2.02
MSH4YFL003C YMR114CQ04471 368 aaKnown RBP2.44□□□□□ -2.02
MSH4YFL003C YPL245WQ12179 454 aaKnown RBP2.44□□□□□ -2.02
MSH4YFL003C TFC7Q12415 435 aa2.44□□□□□ -2.02
MSH4YFL003C HTB1P02293 131 aaKnown RBP2.44□□□□□ -2.02
MSH4YFL003C HTB2P02294 131 aa2.44□□□□□ -2.02
MSH4YFL003C PRX1P34227 261 aaKnown RBP2.44□□□□□ -2.02
MSH4YFL003C GPX1P36014 167 aa2.44□□□□□ -2.02
MSH4YFL003C CUE1P38428 203 aa2.44□□□□□ -2.02
MSH4YFL003C YNL208WP40159 199 aaKnown RBP2.44□□□□□ -2.02
MSH4YFL003C GAB1P41733 394 aa2.44□□□□□ -2.02
MSH4YFL003C YGR018CP53211 109 aa2.44□□□□□ -2.02
MSH4YFL003C YNR066CP53752 436 aa2.44□□□□□ -2.02
MSH4YFL003C FUS2Q05670 677 aa2.44□□□□□ -2.02
MSH4YFL003C IRC25Q07951 179 aa2.44□□□□□ -2.02
MSH4YFL003C FAS2P19097 1887 aaKnown RBP2.43□□□□□ -2.02
MSH4YFL003C QCR7P00128 127 aa2.43□□□□□ -2.02
MSH4YFL003C YCR025CP25352 136 aa2.43□□□□□ -2.02
MSH4YFL003C RFA3P26755 122 aaKnown RBP2.43□□□□□ -2.02
MSH4YFL003C NTF2P33331 125 aaKnown RBP2.43□□□□□ -2.02
MSH4YFL003C IKI1P38874 309 aa2.43□□□□□ -2.02
MSH4YFL003C ERG10P41338 398 aaKnown RBP2.43□□□□□ -2.02
MSH4YFL003C MGA1P53050 456 aa2.43□□□□□ -2.02
MSH4YFL003C GET1P53192 235 aa2.43□□□□□ -2.02
MSH4YFL003C TPS1Q00764 495 aaKnown RBP2.43□□□□□ -2.02
MSH4YFL003C ADD37Q03233 198 aa2.43□□□□□ -2.02
MSH4YFL003C VPS60Q03390 229 aa2.43□□□□□ -2.02
MSH4YFL003C PAL1Q05518 499 aaKnown RBP2.43□□□□□ -2.02
MSH4YFL003C SNU23Q12368 194 aaPredicted RBP2.43□□□□□ -2.02
MSH4YFL003C IDH1P28834 360 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
MSH4YFL003C MBA1P38300 278 aa2.43□□□□□ -2.02
MSH4YFL003C YHB1P39676 399 aaKnown RBP2.43□□□□□ -2.02
MSH4YFL003C YFR057WP43625 151 aa2.43□□□□□ -2.02
MSH4YFL003C NIF3P53081 288 aa2.43□□□□□ -2.02
MSH4YFL003C SDS23P53172 527 aa2.43□□□□□ -2.02
MSH4YFL003C FAR8Q05040 523 aa2.43□□□□□ -2.02
MSH4YFL003C CDD1Q06549 142 aa2.43□□□□□ -2.02
MSH4YFL003C COQ10Q08058 207 aa2.43□□□□□ -2.02
MSH4YFL003C TMC1Q08422 150 aaPredicted RBP2.43□□□□□ -2.02
MSH4YFL003C DCN1Q12395 269 aa2.43□□□□□ -2.02
MSH4YFL003C YPL119C-AQ3E751 87 aa2.43□□□□□ -2.02
MSH4YFL003C CDC10P25342 322 aaKnown RBP2.42□□□□□ -2.02
MSH4YFL003C SPS19P32573 292 aaKnown RBP2.42□□□□□ -2.02
MSH4YFL003C SSO1P32867 290 aa2.42□□□□□ -2.02
MSH4YFL003C YIL001WP40560 513 aa2.42□□□□□ -2.02
MSH4YFL003C ARC18Q05933 178 aaKnown RBP2.42□□□□□ -2.02
MSH4YFL003C YOR292CQ08743 309 aa2.42□□□□□ -2.02
MSH4YFL003C YDR018CQ12185 396 aa2.42□□□□□ -2.02
MSH4YFL003C STE7P06784 515 aa2.42□□□□□ -2.02
MSH4YFL003C SMP1P38128 452 aa2.42□□□□□ -2.02
MSH4YFL003C OM14P38325 134 aa2.42□□□□□ -2.02
MSH4YFL003C SDC1Q03323 175 aa2.42□□□□□ -2.02
MSH4YFL003C YPR098CQ06089 161 aa2.42□□□□□ -2.02
MSH4YFL003C RFM1Q12192 310 aa2.42□□□□□ -2.02
MSH4YFL003C ADE6P38972 1358 aaKnown RBP2.42□□□□□ -2.02
MSH4YFL003C SPT3P06844 337 aa2.41□□□□□ -2.02
MSH4YFL003C ATG15P25641 520 aa2.41□□□□□ -2.02
MSH4YFL003C MRPL27P36526 146 aaPredicted RBP2.41□□□□□ -2.02
MSH4YFL003C MRP21P38175 177 aa2.41□□□□□ -2.02
MSH4YFL003C FZO1P38297 855 aa2.41□□□□□ -2.02
MSH4YFL003C GOS1P38736 223 aa2.41□□□□□ -2.02
MSH4YFL003C SEC72P39742 193 aaKnown RBP2.41□□□□□ -2.02
MSH4YFL003C ADO1P47143 340 aaKnown RBP2.41□□□□□ -2.02
MSH4YFL003C NRM1P53718 249 aa2.41□□□□□ -2.02
MSH4YFL003C RRS1Q08746 203 aaKnown RBP2.41□□□□□ -2.02
MSH4YFL003C JLP1Q12358 412 aa2.41□□□□□ -2.02
MSH4YFL003C BCY1P07278 416 aaKnown RBP2.41□□□□□ -2.02
MSH4YFL003C RPL35AP0CX84 120 aaKnown RBP2.41□□□□□ -2.02
MSH4YFL003C RPL35BP0CX85 120 aaKnown RBP2.41□□□□□ -2.02
MSH4YFL003C RPL4AP10664 362 aaKnown RBP2.41□□□□□ -2.02
MSH4YFL003C AAT2P23542 418 aaKnown RBP2.41□□□□□ -2.02
MSH4YFL003C CDC13P32797 924 aaKnown RBP2.41□□□□□ -2.02
MSH4YFL003C MED8P38304 223 aa2.41□□□□□ -2.02
MSH4YFL003C FRT2P39734 528 aa2.41□□□□□ -2.02
MSH4YFL003C RPL4BP49626 362 aaKnown RBP2.41□□□□□ -2.02
MSH4YFL003C ALG13P53178 202 aa2.41□□□□□ -2.02
MSH4YFL003C GDH2P33327 1092 aaKnown RBP2.4□□□□□ -2.02
MSH4YFL003C RRG9P40156 214 aa2.4□□□□□ -2.02
MSH4YFL003C NSA1P53136 463 aaPredicted RBP2.4□□□□□ -2.02
MSH4YFL003C YLR152CP54072 576 aa2.4□□□□□ -2.02
MSH4YFL003C ATG17Q06410 417 aa2.4□□□□□ -2.02
MSH4YFL003C MMT2Q08970 484 aa2.4□□□□□ -2.02
MSH4YFL003C VIK1Q12045 647 aa2.4□□□□□ -2.02
MSH4YFL003C RPL28P02406 149 aaKnown RBP2.4□□□□□ -2.03
MSH4YFL003C FRM2P37261 193 aa2.4□□□□□ -2.03
MSH4YFL003C KRE29P40026 464 aa2.4□□□□□ -2.03
MSH4YFL003C YJR149WP47177 404 aa2.4□□□□□ -2.03
MSH4YFL003C NUP57P48837 541 aa2.4□□□□□ -2.03
MSH4YFL003C UTP15Q04305 513 aaKnown RBP2.4□□□□□ -2.03
MSH4YFL003C GPM2Q12008 311 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms