RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC2	YDR180W	YNL143C	P53908	130 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	SMX3	P54999	86 aa	Predicted RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	PRP38	Q00723	242 aa	Predicted RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	GIP3	Q03016	1276 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YMR166C	Q03829	368 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	RRP45	Q05636	305 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	YLR179C	Q06252	201 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	SLM3	Q12093	417 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	SPC3	Q12133	184 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	TPO4	Q12256	659 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	AHA1	Q12449	350 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	MRX4	Q12467	430 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	ZPS1	Q12512	249 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YDL007C-A	Q2V2Q0	85 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YCL001W-B	Q96VH2	84 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YPR096C	O13587	100 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	RPL6B	P05739	176 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	ILV5	P06168	395 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	ATP5	P09457	212 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	STE4	P18851	423 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	SAM2	P19358	384 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	RNA14	P25298	677 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	CSM1	P25651	190 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	DAL80	P26343	269 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
SCC2	YDR180W	SPO23	P33757	523 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	MRPL4	P36517	319 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	LDB7	P38210	180 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	UMP1	P38293	148 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	SMB1	P40018	196 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	PHS1	P40857	217 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	COX16	P47081	118 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	MSY1	P48527	492 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	MPA43	P53583	542 aa	Predicted RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	ERV25	P54837	211 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	RPL6A	Q02326	176 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	PRM6	Q04705	352 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	UPS1	Q05776	175 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	VPS74	Q06385	345 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	IRC10	Q08118	586 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	RPS10A	Q08745	105 aa	Predicted RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	FEX1	Q08913	375 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	VAM3	Q12241	283 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	ERV2	Q12284	196 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	AIM45	Q12480	344 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	COX19	Q3E731	98 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YPR053C	Q6Q5F3	151 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	Q0010	Q9ZZX9	128 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
SCC2	YDR180W	PMA1	P05030	918 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	SAG1	P20840	650 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	GAS1	P22146	559 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	BOS1	P25385	244 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	MGT1	P26188	188 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	SUA7	P29055	345 aa	Predicted RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	ACB1	P31787	87 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	MRPL28	P36527	147 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	ZTA1	P38230	334 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	PRS3	P38689	320 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	RRP3	P38712	501 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	GPI16	P38875	610 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	CYC2	P38909	366 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YPS6	P40583	537 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	ERJ5	P43613	295 aa	Predicted RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	YJR015W	P47090	510 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	ECM27	P47144	725 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	BRP1	P53194	125 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YGR127W	P53275	312 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	MRPS17	Q03246	237 aa	Predicted RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	BET5	Q03630	159 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	MIX17	Q03667	156 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YMR082C	Q04276	118 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YLR446W	Q06204	433 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YPL272C	Q08984	517 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	MDM32	Q12171	622 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	PRR2	Q12310	699 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	EAF3	Q12432	401 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YBR255C-A	Q3E776	120 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	PCC1	Q3E833	88 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YPL229W	Q99395	206 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	RPP2A	P05319	106 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	BCY1	P07278	416 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	PUP3	P25451	205 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	UBC8	P28263	218 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	SUA5	P32579	426 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	COT1	P32798	439 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YOX1	P34161	385 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	POP7	P38291	140 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	DBP8	P38719	431 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	LSM4	P40070	187 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	YNL198C	P40166	100 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	SAS2	P40963	338 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	GWT1	P47026	490 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	AZR1	P50080	613 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	AMA1	P50082	593 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	BOR1	P53838	576 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	YIF1	P53845	314 aa	Known RBP	0.91	□□□□□ -2.26
SCC2	YDR180W	RNH201	P53942	307 aa		0.91	□□□□□ -2.26
SCC2	YDR180W	GPI15	P53961	229 aa		0.91	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms