RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W SWM1Q12379 170 aa4.9□□□□□ -1.62
FOB1YDR110W CYC3P06182 269 aa4.89□□□□□ -1.63
FOB1YDR110W PHO13P19881 312 aa4.89□□□□□ -1.63
FOB1YDR110W TRX3P25372 127 aa4.89□□□□□ -1.63
FOB1YDR110W AEP1P32493 518 aa4.89□□□□□ -1.63
FOB1YDR110W ECM33P38248 429 aaKnown RBP4.89□□□□□ -1.63
FOB1YDR110W ATG12P38316 186 aa4.89□□□□□ -1.63
FOB1YDR110W RCK1P38622 512 aa4.89□□□□□ -1.63
FOB1YDR110W TIF11P38912 153 aaKnown RBP4.89□□□□□ -1.63
FOB1YDR110W LYS1P38998 373 aaRIP-Chip data4.89□□□□□ -1.63 RIP-Chip
FOB1YDR110W EXO1P39875 702 aa4.89□□□□□ -1.63
FOB1YDR110W YMR144WP40214 342 aaKnown RBP4.89□□□□□ -1.63
FOB1YDR110W SER33P40510 469 aa4.89□□□□□ -1.63
FOB1YDR110W ERJ5P43613 295 aaPredicted RBP4.89□□□□□ -1.63
FOB1YDR110W IKS1P47042 667 aa4.89□□□□□ -1.63
FOB1YDR110W CAF40P53829 373 aa4.89□□□□□ -1.63
FOB1YDR110W IRC15Q02733 499 aa4.89□□□□□ -1.63
FOB1YDR110W SNU56Q03782 492 aaKnown RBP4.89□□□□□ -1.63
FOB1YDR110W TY1A-BLQ12266 440 aa4.89□□□□□ -1.63
FOB1YDR110W YLR126CQ12288 251 aa4.89□□□□□ -1.63
FOB1YDR110W ATG34Q12292 412 aa4.89□□□□□ -1.63
FOB1YDR110W YDL199CQ12407 687 aa4.89□□□□□ -1.63
FOB1YDR110W MEX67Q99257 599 aaKnown RBP4.89□□□□□ -1.63
FOB1YDR110W DET1Q99288 334 aaKnown RBP4.89□□□□□ -1.63
FOB1YDR110W MTF1P14908 341 aaKnown RBP4.89□□□□□ -1.63
FOB1YDR110W BAT1P38891 393 aaKnown RBP4.89□□□□□ -1.63
FOB1YDR110W AIM2P39721 246 aa4.89□□□□□ -1.63
FOB1YDR110W URM1P40554 99 aaPredicted RBP4.89□□□□□ -1.63
FOB1YDR110W AZF1P41696 914 aa4.89□□□□□ -1.63
FOB1YDR110W BUD32P53323 261 aa4.89□□□□□ -1.63
FOB1YDR110W HCH1P53834 153 aa4.89□□□□□ -1.63
FOB1YDR110W GPI15P53961 229 aa4.89□□□□□ -1.63
FOB1YDR110W NHP10Q03435 203 aa4.89□□□□□ -1.63
FOB1YDR110W FMN1Q03778 218 aa4.89□□□□□ -1.63
FOB1YDR110W YMR253CQ04835 414 aa4.89□□□□□ -1.63
FOB1YDR110W INM2Q05533 292 aa4.89□□□□□ -1.63
FOB1YDR110W ZEO1Q08245 113 aa4.89□□□□□ -1.63
FOB1YDR110W SME1Q12330 94 aaPredicted RBP4.89□□□□□ -1.63
FOB1YDR110W PEX11Q12462 236 aa4.89□□□□□ -1.63
FOB1YDR110W SAM2P19358 384 aaKnown RBP4.88□□□□□ -1.63
FOB1YDR110W EXG1P23776 448 aaKnown RBP4.88□□□□□ -1.63
FOB1YDR110W LST4P34239 828 aa4.88□□□□□ -1.63
FOB1YDR110W SRY1P36007 326 aa4.88□□□□□ -1.63
FOB1YDR110W YHR035WP38769 630 aa4.88□□□□□ -1.63
FOB1YDR110W RPP1P38786 293 aa4.88□□□□□ -1.63
FOB1YDR110W YPT35P38815 214 aaKnown RBP4.88□□□□□ -1.63
FOB1YDR110W ECM14P38836 430 aa4.88□□□□□ -1.63
FOB1YDR110W GLE2P40066 365 aa4.88□□□□□ -1.63
FOB1YDR110W YJR015WP47090 510 aa4.88□□□□□ -1.63
FOB1YDR110W PYK2P52489 506 aaKnown RBP4.88□□□□□ -1.63
FOB1YDR110W SWC4P53201 476 aa4.88□□□□□ -1.63
FOB1YDR110W MAK3Q03503 176 aa4.88□□□□□ -1.63
FOB1YDR110W SFH1Q06168 426 aa4.88□□□□□ -1.63
FOB1YDR110W YOL024WQ08172 172 aa4.88□□□□□ -1.63
FOB1YDR110W MED7Q08278 222 aa4.88□□□□□ -1.63
FOB1YDR110W YLL056CQ12177 298 aa4.88□□□□□ -1.63
FOB1YDR110W UTP23Q12339 254 aaKnown RBP4.88□□□□□ -1.63
FOB1YDR110W TRM10Q12400 293 aa4.88□□□□□ -1.63
FOB1YDR110W SAL1D6W196 494 aa4.87□□□□□ -1.63
FOB1YDR110W MRS1P07266 363 aa4.87□□□□□ -1.63
FOB1YDR110W ERD1P16151 362 aa4.87□□□□□ -1.63
FOB1YDR110W TYR1P20049 452 aa4.87□□□□□ -1.63
FOB1YDR110W ROT2P38138 954 aa4.87□□□□□ -1.63
FOB1YDR110W YPC1P38298 316 aa4.87□□□□□ -1.63
FOB1YDR110W YIL029CP40538 142 aa4.87□□□□□ -1.63
FOB1YDR110W ORC5P50874 479 aa4.87□□□□□ -1.63
FOB1YDR110W TOS8P53147 276 aa4.87□□□□□ -1.63
FOB1YDR110W PRM8P53174 237 aa4.87□□□□□ -1.63
FOB1YDR110W PFA5Q03289 374 aa4.87□□□□□ -1.63
FOB1YDR110W TDA1Q03533 586 aa4.87□□□□□ -1.63
FOB1YDR110W TY1A-MR1Q04215 440 aa4.87□□□□□ -1.63
FOB1YDR110W SNU23Q12368 194 aaPredicted RBP4.87□□□□□ -1.63
FOB1YDR110W IGO2Q9P305 131 aa4.87□□□□□ -1.63
FOB1YDR110W BI3Q9ZZW7 517 aa4.87□□□□□ -1.63
FOB1YDR110W RIM15P43565 1770 aa4.87□□□□□ -1.63
FOB1YDR110W CMD1P06787 147 aaKnown RBP4.86□□□□□ -1.63
FOB1YDR110W OAC1P32332 324 aa4.86□□□□□ -1.63
FOB1YDR110W MRPL24P36525 258 aaPredicted RBP4.86□□□□□ -1.63
FOB1YDR110W SDS24P38314 527 aa4.86□□□□□ -1.63
FOB1YDR110W SAP30P38429 201 aa4.86□□□□□ -1.63
FOB1YDR110W YGP1P38616 354 aaKnown RBP4.86□□□□□ -1.63
FOB1YDR110W AIM18P38884 321 aa4.86□□□□□ -1.63
FOB1YDR110W PDS1P40316 373 aaPredicted RBP4.86□□□□□ -1.63
FOB1YDR110W EGT2P42835 1041 aa4.86□□□□□ -1.63
FOB1YDR110W COQ5P49017 307 aa4.86□□□□□ -1.63
FOB1YDR110W TAZ1Q06510 381 aa4.86□□□□□ -1.63
FOB1YDR110W GAT3Q07928 141 aa4.86□□□□□ -1.63
FOB1YDR110W HRD1Q08109 551 aa4.86□□□□□ -1.63
FOB1YDR110W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
FOB1YDR110W SRL2Q12020 392 aa4.86□□□□□ -1.63
FOB1YDR110W TFS1P14306 219 aa4.86□□□□□ -1.63
FOB1YDR110W BUB3P26449 341 aa4.86□□□□□ -1.63
FOB1YDR110W FRE2P36033 711 aa4.86□□□□□ -1.63
FOB1YDR110W MRPL3P36516 390 aa4.86□□□□□ -1.63
FOB1YDR110W NDT80P38830 627 aa4.86□□□□□ -1.63
FOB1YDR110W YHR127WP38833 243 aaKnown RBP4.86□□□□□ -1.63
FOB1YDR110W LSM4P40070 187 aaKnown RBP4.86□□□□□ -1.63
FOB1YDR110W SOL1P50278 321 aa4.86□□□□□ -1.63
FOB1YDR110W MRM2P53123 320 aa4.86□□□□□ -1.63
FOB1YDR110W RSC9Q03124 581 aa4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 87.8 ms