RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W RPL32P38061 130 aaKnown RBP1.4□□□□□ -2.19
TRM3YDL112W UFD1P53044 361 aa1.4□□□□□ -2.19
TRM3YDL112W GET1P53192 235 aa1.4□□□□□ -2.19
TRM3YDL112W YNR062CP53748 327 aa1.4□□□□□ -2.19
TRM3YDL112W TSR2Q06672 205 aaKnown RBP1.4□□□□□ -2.19
TRM3YDL112W DCI1Q08558 271 aa1.4□□□□□ -2.19
TRM3YDL112W SLF1Q12034 447 aaKnown RBP1.4□□□□□ -2.19
TRM3YDL112W USB1Q12208 290 aaKnown RBP1.4□□□□□ -2.19
TRM3YDL112W INP53Q12271 1107 aa1.4□□□□□ -2.19
TRM3YDL112W URA2P07259 2214 aaKnown RBP1.4□□□□□ -2.19
TRM3YDL112W MES1P00958 751 aaKnown RBP1.39□□□□□ -2.19
TRM3YDL112W RPS16AP0CX51 143 aaKnown RBP1.39□□□□□ -2.19
TRM3YDL112W RPS16BP0CX52 143 aaKnown RBP1.39□□□□□ -2.19
TRM3YDL112W SPS18P32572 300 aa1.39□□□□□ -2.19
TRM3YDL112W SWD2P36104 329 aaPredicted RBP1.39□□□□□ -2.19
TRM3YDL112W SPO73P40031 143 aa1.39□□□□□ -2.19
TRM3YDL112W PHB2P50085 310 aa1.39□□□□□ -2.19
TRM3YDL112W GPI11Q06636 219 aa1.39□□□□□ -2.19
TRM3YDL112W LUC7Q07508 261 aaPredicted RBP1.39□□□□□ -2.19
TRM3YDL112W FCY22Q12119 530 aa1.39□□□□□ -2.19
TRM3YDL112W OPI3P05375 206 aa1.39□□□□□ -2.19
TRM3YDL112W GIT1P25346 518 aa1.39□□□□□ -2.19
TRM3YDL112W RHB1P25378 209 aa1.39□□□□□ -2.19
TRM3YDL112W LOH1P47055 219 aa1.39□□□□□ -2.19
TRM3YDL112W CCC1P47818 322 aa1.39□□□□□ -2.19
TRM3YDL112W UBC13P52490 153 aa1.39□□□□□ -2.19
TRM3YDL112W COS10P52924 374 aa1.39□□□□□ -2.19
TRM3YDL112W COG5P53951 403 aa1.39□□□□□ -2.19
TRM3YDL112W SPR6Q01684 191 aa1.39□□□□□ -2.19
TRM3YDL112W UIP4Q08926 304 aa1.39□□□□□ -2.19
TRM3YDL112W YBR255C-AQ3E776 120 aa1.39□□□□□ -2.19
TRM3YDL112W YGR035W-AQ45U48 73 aa1.39□□□□□ -2.19
TRM3YDL112W RIB3Q99258 208 aa1.39□□□□□ -2.19
TRM3YDL112W RPC40P07703 335 aaKnown RBP1.39□□□□□ -2.19
TRM3YDL112W MDL1P33310 695 aa1.39□□□□□ -2.19
TRM3YDL112W SRP102P36057 244 aaPredicted RBP1.39□□□□□ -2.19
TRM3YDL112W YER121WP40076 114 aa1.39□□□□□ -2.19
TRM3YDL112W PRM5P40476 318 aa1.39□□□□□ -2.19
TRM3YDL112W OST1P41543 476 aaKnown RBP1.39□□□□□ -2.19
TRM3YDL112W AGP3P43548 558 aa1.39□□□□□ -2.19
TRM3YDL112W SAM50P53969 484 aa1.39□□□□□ -2.19
TRM3YDL112W STD1Q02794 444 aa1.39□□□□□ -2.19
TRM3YDL112W PIN3Q06449 215 aa1.39□□□□□ -2.19
TRM3YDL112W CSI2Q08054 341 aa1.39□□□□□ -2.19
TRM3YDL112W HMS1Q12398 434 aa1.39□□□□□ -2.19
TRM3YDL112W PDE2P06776 526 aa1.39□□□□□ -2.19
TRM3YDL112W DSF1P0CX08 502 aa1.39□□□□□ -2.19
TRM3YDL112W YNR073CP0CX09 502 aa1.39□□□□□ -2.19
TRM3YDL112W YCR100CP25606 316 aa1.39□□□□□ -2.19
TRM3YDL112W ECT1P33412 323 aa1.39□□□□□ -2.19
TRM3YDL112W RBG1P39729 369 aa1.39□□□□□ -2.19
TRM3YDL112W CTK2P46962 323 aa1.39□□□□□ -2.19
TRM3YDL112W RIM9Q04734 239 aa1.39□□□□□ -2.19
TRM3YDL112W NDL1Q06568 189 aa1.39□□□□□ -2.19
TRM3YDL112W YDL114WQ07530 308 aa1.39□□□□□ -2.19
TRM3YDL112W NFI1Q12216 726 aa1.39□□□□□ -2.19
TRM3YDL112W MCT1Q12283 360 aa1.39□□□□□ -2.19
TRM3YDL112W YKL068W-AQ3E826 78 aa1.39□□□□□ -2.19
TRM3YDL112W QCR7P00128 127 aa1.38□□□□□ -2.19
TRM3YDL112W RAD52P06778 471 aaKnown RBP1.38□□□□□ -2.19
TRM3YDL112W YER190C-BP0CX94 160 aa1.38□□□□□ -2.19
TRM3YDL112W YEL077W-AP0CX95 160 aa1.38□□□□□ -2.19
TRM3YDL112W YGR296C-BP0CX96 160 aa1.38□□□□□ -2.19
TRM3YDL112W YPL283W-BP0CX97 160 aa1.38□□□□□ -2.19
TRM3YDL112W YPR204C-AP0CX98 160 aa1.38□□□□□ -2.19
TRM3YDL112W YFL068WP0CX99 160 aa1.38□□□□□ -2.19
TRM3YDL112W YLL066W-AP0CY00 160 aa1.38□□□□□ -2.19
TRM3YDL112W YLL067W-AP0CY01 160 aa1.38□□□□□ -2.19
TRM3YDL112W BGL2P15703 313 aaKnown RBP1.38□□□□□ -2.19
TRM3YDL112W SNF6P18888 332 aa1.38□□□□□ -2.19
TRM3YDL112W DBF2P22204 572 aa1.38□□□□□ -2.19
TRM3YDL112W PPA2P28239 310 aa1.38□□□□□ -2.19
TRM3YDL112W GLC7P32598 312 aaKnown RBP1.38□□□□□ -2.19
TRM3YDL112W LTV1P34078 463 aa1.38□□□□□ -2.19
TRM3YDL112W CAK1P43568 368 aaPredicted RBP1.38□□□□□ -2.19
TRM3YDL112W YNR064CP53750 290 aa1.38□□□□□ -2.19
TRM3YDL112W YPL067CQ02754 198 aa1.38□□□□□ -2.19
TRM3YDL112W GSH2Q08220 491 aa1.38□□□□□ -2.19
TRM3YDL112W SKI7Q08491 747 aaPredicted RBP1.38□□□□□ -2.19
TRM3YDL112W ISA2Q12425 185 aa1.38□□□□□ -2.19
TRM3YDL112W VCX1Q99385 411 aa1.38□□□□□ -2.19
TRM3YDL112W COX9P07255 59 aa1.38□□□□□ -2.19
TRM3YDL112W PET9P18239 318 aaKnown RBP1.38□□□□□ -2.19
TRM3YDL112W TOM40P23644 387 aaKnown RBP1.38□□□□□ -2.19
TRM3YDL112W PEX3P28795 441 aa1.38□□□□□ -2.19
TRM3YDL112W ACH1P32316 526 aa1.38□□□□□ -2.19
TRM3YDL112W SAC1P32368 623 aaKnown RBP1.38□□□□□ -2.19
TRM3YDL112W CHL4P38907 458 aa1.38□□□□□ -2.19
TRM3YDL112W YJL055WP47044 245 aa1.38□□□□□ -2.19
TRM3YDL112W USE1P53146 245 aa1.38□□□□□ -2.19
TRM3YDL112W YNR048WP53740 393 aa1.38□□□□□ -2.19
TRM3YDL112W TPS1Q00764 495 aaKnown RBP1.38□□□□□ -2.19
TRM3YDL112W ACL4Q03771 387 aa1.38□□□□□ -2.19
TRM3YDL112W YMR254CQ04838 102 aa1.38□□□□□ -2.19
TRM3YDL112W ELP6Q04868 273 aa1.38□□□□□ -2.19
TRM3YDL112W MDN1Q12019 4910 aaKnown RBP1.38□□□□□ -2.19
TRM3YDL112W TIM9O74700 87 aa1.38□□□□□ -2.19
TRM3YDL112W RPN2P32565 945 aaKnown RBP1.38□□□□□ -2.19
TRM3YDL112W CPR5P35176 225 aa1.38□□□□□ -2.19
TRM3YDL112W HPM1P40481 377 aa1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms