RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	DIA3	P52290	468 aa		3.38	□□□□□ -1.87
RPN6	YDL097C	CAB4	P53332	305 aa		3.38	□□□□□ -1.87
RPN6	YDL097C	MPP6	P53725	186 aa	Predicted RBP	3.38	□□□□□ -1.87
RPN6	YDL097C	TIM11	P81449	96 aa	Predicted RBP	3.38	□□□□□ -1.87
RPN6	YDL097C	RCF1	Q03713	159 aa		3.38	□□□□□ -1.87
RPN6	YDL097C	VTI1	Q04338	217 aa		3.38	□□□□□ -1.87
RPN6	YDL097C	ATG17	Q06410	417 aa		3.38	□□□□□ -1.87
RPN6	YDL097C	LUC7	Q07508	261 aa	Predicted RBP	3.38	□□□□□ -1.87
RPN6	YDL097C	GSH2	Q08220	491 aa		3.38	□□□□□ -1.87
RPN6	YDL097C	RIO1	Q12196	484 aa	Known RBP	3.38	□□□□□ -1.87
RPN6	YDL097C	ISA2	Q12425	185 aa		3.38	□□□□□ -1.87
RPN6	YDL097C	SNF8	Q12483	233 aa		3.38	□□□□□ -1.87
RPN6	YDL097C	YOL159C-A	Q3E769	90 aa		3.38	□□□□□ -1.87
RPN6	YDL097C	TDH2	P00358	332 aa	Known RBP	3.37	□□□□□ -1.87
RPN6	YDL097C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
RPN6	YDL097C	TDH1	P00360	332 aa	Known RBP	3.37	□□□□□ -1.87
RPN6	YDL097C	COX2	P00410	251 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	MF(ALPHA)1	P01149	165 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	CLB3	P24870	427 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	BUD23	P25627	275 aa	Predicted RBP	3.37	□□□□□ -1.87
RPN6	YDL097C	TIM12	P32830	109 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	MSN4	P33749	630 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	CAF4	P36130	643 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	FZO1	P38297	855 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	UIP3	P39547	235 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	OST1	P41543	476 aa	Known RBP	3.37	□□□□□ -1.87
RPN6	YDL097C	TDA10	P42938	290 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	IMD4	P50094	524 aa	Known RBP	3.37	□□□□□ -1.87
RPN6	YDL097C	NOP19	P53317	196 aa	Predicted RBP	3.37	□□□□□ -1.87
RPN6	YDL097C	YNL058C	P53947	316 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	YDR239C	Q03780	787 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	PLP1	Q04004	230 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	HOR7	Q05827	59 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
RPN6	YDL097C	MIM1	Q08176	113 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	INP53	Q12271	1107 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	NCA2	Q12374	616 aa		3.37	□□□□□ -1.87
RPN6	YDL097C	RHO2	P06781	192 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	FAR1	P21268	830 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	SNC1	P31109	117 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	UTR5	P32630	166 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	RPC34	P32910	317 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	VPS17	P32913	551 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	UTP11	P34247	250 aa	Predicted RBP	3.36	□□□□□ -1.87
RPN6	YDL097C	YBR242W	P38331	238 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	YNL320W	P42840	284 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	BIO4	P53630	237 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	SRL4	Q03085	281 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	YMR010W	Q03687	405 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	MGR3	Q04472	501 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	SYO1	Q07395	620 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	OSW1	Q08692	278 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	APC2	Q12440	853 aa		3.36	□□□□□ -1.87
RPN6	YDL097C	BOS1	P25385	244 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	INO2	P26798	304 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	PPA2	P28239	310 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	GSH1	P32477	678 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	SUR1	P33300	382 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	ZRT3	P34240	503 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	MCH2	P36032	473 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	JEN1	P36035	616 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	RCN1	P36054	211 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	ANR2	P36090	516 aa	Predicted RBP	3.35	□□□□□ -1.87
RPN6	YDL097C	FLO10	P36170	1169 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	BIG1	P38813	335 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	GDI1	P39958	451 aa	Known RBP	3.35	□□□□□ -1.87
RPN6	YDL097C	RMD6	P39975	231 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	FCY21	P40039	528 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	NAS2	P40555	220 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	VPS55	P47111	140 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	TWF1	P53250	332 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	RNH201	P53942	307 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	YLR345W	Q06137	509 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	HRT1	Q08273	121 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	ULA1	Q12059	462 aa		3.35	□□□□□ -1.87
RPN6	YDL097C	HTZ1	Q12692	134 aa	Known RBP	3.35	□□□□□ -1.87
RPN6	YDL097C	SIR2	P06700	562 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	MER1	P16523	270 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	DPB2	P24482	689 aa	Predicted RBP	3.34	□□□□□ -1.87
RPN6	YDL097C	ILV6	P25605	309 aa	Known RBP	3.34	□□□□□ -1.87
RPN6	YDL097C	YOX1	P34161	385 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	YBR063C	P38083	404 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	FAR3	P46671	204 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	PMT5	P52867	743 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	YNR062C	P53748	327 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	DML1	Q03652	475 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	GPI17	Q04080	534 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	PEX12	Q04370	399 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	DPB4	Q04603	196 aa	Known RBP	3.34	□□□□□ -1.87
RPN6	YDL097C	FMP42	Q04991	504 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	YPR098C	Q06089	161 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	ARO10	Q06408	635 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	FRE3	Q08905	711 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	PRM3	Q08931	133 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	YPL199C	Q08954	240 aa		3.34	□□□□□ -1.87
RPN6	YDL097C	SCEI	P03882	235 aa		3.33	□□□□□ -1.88
RPN6	YDL097C	PET494	P07390	489 aa	Predicted RBP	3.33	□□□□□ -1.88
RPN6	YDL097C	AQY1	P0CD91	305 aa		3.33	□□□□□ -1.88
RPN6	YDL097C	MRP2	P10663	115 aa	Predicted RBP	3.33	□□□□□ -1.88
RPN6	YDL097C	MRP13	P12686	339 aa		3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 89.8 ms