RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C SWS2P53937 143 aa1.38□□□□□ -2.19
ASM4YDL088C CDC14Q00684 551 aa1.38□□□□□ -2.19
ASM4YDL088C SNZ1Q03148 297 aa1.38□□□□□ -2.19
ASM4YDL088C SDC1Q03323 175 aa1.38□□□□□ -2.19
ASM4YDL088C YOR292CQ08743 309 aa1.38□□□□□ -2.19
ASM4YDL088C AI5_BETAQ9ZZX0 354 aa1.38□□□□□ -2.19
ASM4YDL088C YMR316C-AI2HB70 103 aa1.38□□□□□ -2.19
ASM4YDL088C YKR104WP0CE69 306 aa1.38□□□□□ -2.19
ASM4YDL088C RPL4AP10664 362 aaKnown RBP1.38□□□□□ -2.19
ASM4YDL088C TCP1P12612 559 aaKnown RBP1.38□□□□□ -2.19
ASM4YDL088C POX1P13711 748 aa1.38□□□□□ -2.19
ASM4YDL088C YMR31P19955 123 aa1.38□□□□□ -2.19
ASM4YDL088C OSM1P21375 501 aaKnown RBP1.38□□□□□ -2.19
ASM4YDL088C MIC12P38341 106 aa1.38□□□□□ -2.19
ASM4YDL088C URA8P38627 578 aaPredicted RBP1.38□□□□□ -2.19
ASM4YDL088C KRE29P40026 464 aa1.38□□□□□ -2.19
ASM4YDL088C SER33P40510 469 aa1.38□□□□□ -2.19
ASM4YDL088C MCM22P47167 239 aa1.38□□□□□ -2.19
ASM4YDL088C RPL4BP49626 362 aaKnown RBP1.38□□□□□ -2.19
ASM4YDL088C MIC26P50087 233 aa1.38□□□□□ -2.19
ASM4YDL088C UFD1P53044 361 aa1.38□□□□□ -2.19
ASM4YDL088C HOP2P53187 214 aa1.38□□□□□ -2.19
ASM4YDL088C SLX9P53251 210 aaPredicted RBP1.38□□□□□ -2.19
ASM4YDL088C EBS1Q03466 884 aaKnown RBP1.38□□□□□ -2.19
ASM4YDL088C ARC18Q05933 178 aaKnown RBP1.38□□□□□ -2.19
ASM4YDL088C YDL144CQ07589 356 aa1.38□□□□□ -2.19
ASM4YDL088C ABP140Q08641 628 aaKnown RBP1.38□□□□□ -2.19
ASM4YDL088C YOR283WQ12040 230 aaKnown RBP1.38□□□□□ -2.19
ASM4YDL088C TIM22Q12328 207 aa1.38□□□□□ -2.19
ASM4YDL088C DCN1Q12395 269 aa1.38□□□□□ -2.19
ASM4YDL088C YKL183C-AQ3E765 70 aa1.38□□□□□ -2.19
ASM4YDL088C BCY1P07278 416 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C RPL27AP0C2H6 136 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C RPL27BP0C2H7 136 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C RAD51P25454 400 aa1.37□□□□□ -2.19
ASM4YDL088C IDH1P28834 360 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
ASM4YDL088C ARC19P33204 171 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C GDH2P33327 1092 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C PRX1P34227 261 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C TAF14P35189 244 aa1.37□□□□□ -2.19
ASM4YDL088C HEK2P38199 381 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19 RIP-Chip
ASM4YDL088C EGD2P38879 174 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C SEN34P39707 275 aa1.37□□□□□ -2.19
ASM4YDL088C YER034WP40022 185 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C YIL001WP40560 513 aa1.37□□□□□ -2.19
ASM4YDL088C YFL064CP43540 174 aa1.37□□□□□ -2.19
ASM4YDL088C CWC23P52868 283 aaPredicted RBP1.37□□□□□ -2.19
ASM4YDL088C GET1P53192 235 aa1.37□□□□□ -2.19
ASM4YDL088C CTF19Q02732 369 aa1.37□□□□□ -2.19
ASM4YDL088C YMR166CQ03829 368 aa1.37□□□□□ -2.19
ASM4YDL088C YMR114CQ04471 368 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C COQ10Q08058 207 aa1.37□□□□□ -2.19
ASM4YDL088C RRP40Q08285 240 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C RRS1Q08746 203 aaKnown RBP1.37□□□□□ -2.19
ASM4YDL088C YPL119C-AQ3E751 87 aa1.37□□□□□ -2.19
ASM4YDL088C CMC2Q3E7A4 109 aa1.37□□□□□ -2.19
ASM4YDL088C ATG15P25641 520 aa1.36□□□□□ -2.19
ASM4YDL088C ATP7P30902 174 aa1.36□□□□□ -2.19
ASM4YDL088C CAT2P32796 670 aaKnown RBP1.36□□□□□ -2.19
ASM4YDL088C JEN1P36035 616 aa1.36□□□□□ -2.19
ASM4YDL088C CBT1P36038 271 aaPredicted RBP1.36□□□□□ -2.19
ASM4YDL088C DRE2P36152 348 aa1.36□□□□□ -2.19
ASM4YDL088C GOS1P38736 223 aa1.36□□□□□ -2.19
ASM4YDL088C IKI1P38874 309 aa1.36□□□□□ -2.19
ASM4YDL088C YHB1P39676 399 aaKnown RBP1.36□□□□□ -2.19
ASM4YDL088C PRP24P49960 444 aaKnown RBP1.36□□□□□ -2.19
ASM4YDL088C MIG2P53035 382 aa1.36□□□□□ -2.19
ASM4YDL088C MRH4P53166 561 aa1.36□□□□□ -2.19
ASM4YDL088C AAH1P53909 347 aa1.36□□□□□ -2.19
ASM4YDL088C RHO3Q00245 231 aaKnown RBP1.36□□□□□ -2.19
ASM4YDL088C SPG4Q04438 115 aa1.36□□□□□ -2.19
ASM4YDL088C PEX10Q05568 337 aa1.36□□□□□ -2.19
ASM4YDL088C CDC123Q05791 360 aa1.36□□□□□ -2.19
ASM4YDL088C SEI1Q06058 285 aa1.36□□□□□ -2.19
ASM4YDL088C LOA1Q06508 300 aa1.36□□□□□ -2.19
ASM4YDL088C YPR147CQ06522 304 aaKnown RBP1.36□□□□□ -2.19
ASM4YDL088C RDS3Q06835 107 aaPredicted RBP1.36□□□□□ -2.19
ASM4YDL088C SYC1Q08553 188 aaPredicted RBP1.36□□□□□ -2.19
ASM4YDL088C JLP1Q12358 412 aa1.36□□□□□ -2.19
ASM4YDL088C HTB1P02293 131 aaKnown RBP1.35□□□□□ -2.19
ASM4YDL088C HTB2P02294 131 aa1.35□□□□□ -2.19
ASM4YDL088C MATALPHA2P0CY08 210 aa1.35□□□□□ -2.19
ASM4YDL088C HMLALPHA2P0CY09 210 aa1.35□□□□□ -2.19
ASM4YDL088C CDC10P25342 322 aaKnown RBP1.35□□□□□ -2.19
ASM4YDL088C ADE1P27616 306 aa1.35□□□□□ -2.19
ASM4YDL088C IMP1P28627 190 aa1.35□□□□□ -2.19
ASM4YDL088C ERG2P32352 222 aa1.35□□□□□ -2.19
ASM4YDL088C NTF2P33331 125 aaKnown RBP1.35□□□□□ -2.19
ASM4YDL088C SGE1P33335 543 aa1.35□□□□□ -2.19
ASM4YDL088C ECM4P36156 370 aa1.35□□□□□ -2.19
ASM4YDL088C POP8P38208 133 aa1.35□□□□□ -2.19
ASM4YDL088C YBR062CP38239 180 aa1.35□□□□□ -2.19
ASM4YDL088C YBR096WP38256 230 aa1.35□□□□□ -2.19
ASM4YDL088C AVT6P40074 448 aa1.35□□□□□ -2.19
ASM4YDL088C YNL194CP40169 301 aa1.35□□□□□ -2.19
ASM4YDL088C IRC18P47056 224 aa1.35□□□□□ -2.19
ASM4YDL088C ADO1P47143 340 aaKnown RBP1.35□□□□□ -2.19
ASM4YDL088C YJR141WP47172 347 aaPredicted RBP1.35□□□□□ -2.19
ASM4YDL088C YJR149WP47177 404 aa1.35□□□□□ -2.19
ASM4YDL088C MGA1P53050 456 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms