RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	YDR115W	Q04598	105 aa		4.05	□□□□□ -1.76
SMP1	YBR182C	GGA1	Q06336	557 aa		4.05	□□□□□ -1.76
SMP1	YBR182C	YPL150W	Q12152	901 aa		4.05	□□□□□ -1.76
SMP1	YBR182C	QCR2	P07257	368 aa		4.04	□□□□□ -1.76
SMP1	YBR182C	PHO80	P20052	293 aa		4.04	□□□□□ -1.76
SMP1	YBR182C	CAT2	P32796	670 aa	Known RBP	4.04	□□□□□ -1.76
SMP1	YBR182C	YPT52	P36018	234 aa	Known RBP	4.04	□□□□□ -1.76
SMP1	YBR182C	TMA22	P47089	198 aa	Predicted RBP	4.04	□□□□□ -1.76
SMP1	YBR182C	FMP48	P53233	369 aa		4.04	□□□□□ -1.76
SMP1	YBR182C	FMP41	P53889	259 aa	Known RBP	4.04	□□□□□ -1.76
SMP1	YBR182C	RPL21A	Q02753	160 aa	Known RBP	4.04	□□□□□ -1.76
SMP1	YBR182C	MRX11	Q03079	207 aa		4.04	□□□□□ -1.76
SMP1	YBR182C	NDD1	Q08887	554 aa		4.04	□□□□□ -1.76
SMP1	YBR182C	MRX4	Q12467	430 aa		4.04	□□□□□ -1.76
SMP1	YBR182C	COX5A	P00424	153 aa		4.03	□□□□□ -1.76
SMP1	YBR182C	POP8	P38208	133 aa		4.03	□□□□□ -1.76
SMP1	YBR182C	AME1	P38313	324 aa		4.03	□□□□□ -1.76
SMP1	YBR182C	BAT1	P38891	393 aa	Known RBP	4.03	□□□□□ -1.76
SMP1	YBR182C	CPR7	P47103	393 aa		4.03	□□□□□ -1.76
SMP1	YBR182C	GTR2	P53290	341 aa		4.03	□□□□□ -1.76
SMP1	YBR182C	LIP2	Q06005	328 aa		4.03	□□□□□ -1.76
SMP1	YBR182C	YNG1	Q08465	219 aa		4.03	□□□□□ -1.76
SMP1	YBR182C	YBR298C-A	Q8TGK4	73 aa		4.03	□□□□□ -1.76
SMP1	YBR182C	PSK1	P31374	1356 aa		4.03	□□□□□ -1.76
SMP1	YBR182C	YCR025C	P25352	136 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	TRR1	P29509	319 aa	Known RBP	4.02	□□□□□ -1.77
SMP1	YBR182C	SPS18	P32572	300 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	OM14	P38325	134 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	YHI9	P38765	294 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	GGC1	P38988	300 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	YER121W	P40076	114 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	YIL012W	P40551	113 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	YJR056C	P47115	236 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	BXI1	P48558	297 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	MRH4	P53166	561 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	AAH1	P53909	347 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	RMI1	Q02685	241 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	GOT1	Q03554	138 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	DRS2	P39524	1355 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	GCN3	P14741	305 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	DBF2	P22204	572 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	FIG1	P38224	298 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	PHO89	P38361	574 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	MIG3	P39943	394 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	COG3	P40094	801 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	YKE4	P40544	346 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	GAB1	P41733	394 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	IGD1	P43598	195 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	MIG2	P53035	382 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	YDR124W	Q04608	324 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	SYC1	Q08553	188 aa	Predicted RBP	4.02	□□□□□ -1.77
SMP1	YBR182C	YOR376W	Q08900	122 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	YDR018C	Q12185	396 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	HRT3	Q12347	344 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	TRM10	Q12400	293 aa		4.02	□□□□□ -1.77
SMP1	YBR182C	CDC28	P00546	298 aa	Known RBP	4.01	□□□□□ -1.77
SMP1	YBR182C	ZWF1	P11412	505 aa	Known RBP	4.01	□□□□□ -1.77
SMP1	YBR182C	TIP20	P33891	701 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	PRY2	P36110	329 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	MRPL28	P36527	147 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	HMT1	P38074	348 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	POP7	P38291	140 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	TOS8	P53147	276 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	YNL140C	P53910	189 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	SNO1	Q03144	224 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	YMR279C	Q03263	540 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	INP1	Q03694	420 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	PEX12	Q04370	399 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	YMR317W	Q04893	1140 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	SPC2	Q04969	178 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	YOR186W	Q08560	144 aa		4.01	□□□□□ -1.77
SMP1	YBR182C	WTM1	Q12363	437 aa	Known RBP	4.01	□□□□□ -1.77
SMP1	YBR182C	MET2	P08465	486 aa		4	□□□□□ -1.77
SMP1	YBR182C	PUT1	P09368	476 aa		4	□□□□□ -1.77
SMP1	YBR182C	MEI4	P29467	408 aa		4	□□□□□ -1.77
SMP1	YBR182C	SRY1	P36007	326 aa		4	□□□□□ -1.77
SMP1	YBR182C	DBP7	P36120	742 aa	Known RBP	4	□□□□□ -1.77
SMP1	YBR182C	SEO1	P39709	593 aa		4	□□□□□ -1.77
SMP1	YBR182C	MIC19	P43594	170 aa		4	□□□□□ -1.77
SMP1	YBR182C	YNL046W	P53956	172 aa		4	□□□□□ -1.77
SMP1	YBR182C	INM2	Q05533	292 aa		4	□□□□□ -1.77
SMP1	YBR182C	YOL163W	P0CF20	169 aa		3.99	□□□□□ -1.77
SMP1	YBR182C	ERD2	P18414	219 aa		3.99	□□□□□ -1.77
SMP1	YBR182C	ERG2	P32352	222 aa		3.99	□□□□□ -1.77
SMP1	YBR182C	YOX1	P34161	385 aa		3.99	□□□□□ -1.77
SMP1	YBR182C	AVT6	P40074	448 aa		3.99	□□□□□ -1.77
SMP1	YBR182C	LSM1	P47017	172 aa	Known RBP	3.99	□□□□□ -1.77
SMP1	YBR182C	SYF2	P53277	215 aa	Predicted RBP	3.99	□□□□□ -1.77
SMP1	YBR182C	YLR460C	P54007	376 aa		3.99	□□□□□ -1.77
SMP1	YBR182C	VHS1	Q03785	461 aa		3.99	□□□□□ -1.77
SMP1	YBR182C	API2	Q04413	109 aa		3.99	□□□□□ -1.77
SMP1	YBR182C	YBL008W-A	Q3E821	79 aa		3.99	□□□□□ -1.77
SMP1	YBR182C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
SMP1	YBR182C	RFS1	P38234	210 aa	Known RBP	3.98	□□□□□ -1.77
SMP1	YBR182C	SSH1	P38353	490 aa	Known RBP	3.98	□□□□□ -1.77
SMP1	YBR182C	EDC2	P40023	145 aa	Predicted RBP	3.98	□□□□□ -1.77
SMP1	YBR182C	ILM1	P47155	203 aa		3.98	□□□□□ -1.77
SMP1	YBR182C	NRK1	P53915	240 aa		3.98	□□□□□ -1.77
SMP1	YBR182C	YML108W	Q03759	105 aa		3.98	□□□□□ -1.77
SMP1	YBR182C	TIR4	Q12218	487 aa	Predicted RBP	3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms