RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W RPL24AP04449 155 aaKnown RBP4.83□□□□□ -1.64
SHP1YBL058W ILV5P06168 395 aaKnown RBP4.83□□□□□ -1.64
SHP1YBL058W HXT2P23585 541 aa4.83□□□□□ -1.64
SHP1YBL058W FRM2P37261 193 aa4.83□□□□□ -1.64
SHP1YBL058W GON7P46984 123 aa4.83□□□□□ -1.64
SHP1YBL058W TAX4P47030 604 aa4.83□□□□□ -1.64
SHP1YBL058W COX18P53239 316 aa4.83□□□□□ -1.64
SHP1YBL058W YNR048WP53740 393 aa4.83□□□□□ -1.64
SHP1YBL058W SAM50P53969 484 aa4.83□□□□□ -1.64
SHP1YBL058W RFU1Q08003 200 aa4.83□□□□□ -1.64
SHP1YBL058W ISA2Q12425 185 aa4.83□□□□□ -1.64
SHP1YBL058W RPS8AP0CX39 200 aaKnown RBP4.82□□□□□ -1.64
SHP1YBL058W RPS8BP0CX40 200 aaKnown RBP4.82□□□□□ -1.64
SHP1YBL058W SNF4P12904 322 aa4.82□□□□□ -1.64
SHP1YBL058W SAG1P20840 650 aa4.82□□□□□ -1.64
SHP1YBL058W FUN19P28003 413 aaPredicted RBP4.82□□□□□ -1.64
SHP1YBL058W YCR041WP37265 110 aa4.82□□□□□ -1.64
SHP1YBL058W YPK3P38070 525 aa4.82□□□□□ -1.64
SHP1YBL058W FIG1P38224 298 aa4.82□□□□□ -1.64
SHP1YBL058W PSD1P39006 500 aa4.82□□□□□ -1.64
SHP1YBL058W ECM1P39715 212 aa4.82□□□□□ -1.64
SHP1YBL058W DIM1P41819 318 aaKnown RBP4.82□□□□□ -1.64
SHP1YBL058W AGP3P43548 558 aa4.82□□□□□ -1.64
SHP1YBL058W XPT1P47165 209 aa4.82□□□□□ -1.64
SHP1YBL058W SNZ1Q03148 297 aa4.82□□□□□ -1.64
SHP1YBL058W YDR239CQ03780 787 aa4.82□□□□□ -1.64
SHP1YBL058W YDR248CQ03786 193 aa4.82□□□□□ -1.64
SHP1YBL058W CAC2Q04199 468 aa4.82□□□□□ -1.64
SHP1YBL058W ARR2Q06597 130 aa4.82□□□□□ -1.64
SHP1YBL058W GSH2Q08220 491 aa4.82□□□□□ -1.64
SHP1YBL058W YOR378WQ08902 515 aa4.82□□□□□ -1.64
SHP1YBL058W FCY22Q12119 530 aa4.82□□□□□ -1.64
SHP1YBL058W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64 RIP-Chip
SHP1YBL058W RIB3Q99258 208 aa4.82□□□□□ -1.64
SHP1YBL058W TPK3P05986 398 aa4.81□□□□□ -1.64
SHP1YBL058W SPS4P09937 338 aa4.81□□□□□ -1.64
SHP1YBL058W RPL30P14120 105 aaKnown RBP4.81□□□□□ -1.64
SHP1YBL058W OAC1P32332 324 aa4.81□□□□□ -1.64
SHP1YBL058W PDB1P32473 366 aaKnown RBP4.81□□□□□ -1.64
SHP1YBL058W SSE2P32590 693 aaKnown RBP4.81□□□□□ -1.64
SHP1YBL058W PEX32P38292 413 aa4.81□□□□□ -1.64
SHP1YBL058W YER079WP40052 210 aaKnown RBP4.81□□□□□ -1.64
SHP1YBL058W SWP82P43554 623 aa4.81□□□□□ -1.64
SHP1YBL058W PHB2P50085 310 aa4.81□□□□□ -1.64
SHP1YBL058W TAF4P50105 388 aa4.81□□□□□ -1.64
SHP1YBL058W SOD2P00447 233 aa4.8□□□□□ -1.64
SHP1YBL058W RPA135P22138 1203 aaKnown RBP4.8□□□□□ -1.64
SHP1YBL058W ELO2P25358 347 aa4.8□□□□□ -1.64
SHP1YBL058W AFR1P33304 620 aa4.8□□□□□ -1.64
SHP1YBL058W PEX7P39108 375 aa4.8□□□□□ -1.64
SHP1YBL058W THO1P40040 218 aaKnown RBP4.8□□□□□ -1.64
SHP1YBL058W PMT6P42934 759 aa4.8□□□□□ -1.64
SHP1YBL058W PIR5P46999 287 aa4.8□□□□□ -1.64
SHP1YBL058W CCC1P47818 322 aa4.8□□□□□ -1.64
SHP1YBL058W YGR016WP53209 190 aa4.8□□□□□ -1.64
SHP1YBL058W SLI1P53304 468 aa4.8□□□□□ -1.64
SHP1YBL058W ASI2P53895 289 aa4.8□□□□□ -1.64
SHP1YBL058W AAH1P53909 347 aa4.8□□□□□ -1.64
SHP1YBL058W YPL067CQ02754 198 aa4.8□□□□□ -1.64
SHP1YBL058W HOT1Q03213 719 aa4.8□□□□□ -1.64
SHP1YBL058W SMP3Q04174 516 aa4.8□□□□□ -1.64
SHP1YBL058W GAL83Q04739 417 aa4.8□□□□□ -1.64
SHP1YBL058W YMR254CQ04838 102 aa4.8□□□□□ -1.64
SHP1YBL058W YMR315WQ04869 349 aaKnown RBP4.8□□□□□ -1.64
SHP1YBL058W RBS1Q05672 457 aaKnown RBP4.8□□□□□ -1.64
SHP1YBL058W TMA10Q06177 86 aa4.8□□□□□ -1.64
SHP1YBL058W MED7Q08278 222 aa4.8□□□□□ -1.64
SHP1YBL058W ENV7Q12003 364 aa4.8□□□□□ -1.64
SHP1YBL058W PST2Q12335 198 aaKnown RBP4.8□□□□□ -1.64
SHP1YBL058W PCL9Q12477 304 aa4.8□□□□□ -1.64
SHP1YBL058W RAD52P06778 471 aaKnown RBP4.79□□□□□ -1.64
SHP1YBL058W PMR1P13586 950 aa4.79□□□□□ -1.64
SHP1YBL058W ECT1P33412 323 aa4.79□□□□□ -1.64
SHP1YBL058W TMA19P35691 167 aaKnown RBP4.79□□□□□ -1.64
SHP1YBL058W SDP1P40479 209 aa4.79□□□□□ -1.64
SHP1YBL058W NRK1P53915 240 aa4.79□□□□□ -1.64
SHP1YBL058W YMD8Q03697 442 aa4.79□□□□□ -1.64
SHP1YBL058W YMR166CQ03829 368 aa4.79□□□□□ -1.64
SHP1YBL058W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
SHP1YBL058W THP3Q12049 470 aaKnown RBP4.79□□□□□ -1.64
SHP1YBL058W SGA1P08019 549 aa4.78□□□□□ -1.64
SHP1YBL058W FBA1P14540 359 aaKnown RBP4.78□□□□□ -1.64
SHP1YBL058W DOA4P32571 926 aa4.78□□□□□ -1.64
SHP1YBL058W ANR2P36090 516 aaPredicted RBP4.78□□□□□ -1.64
SHP1YBL058W THI2P38141 450 aa4.78□□□□□ -1.64
SHP1YBL058W RPS0BP46654 252 aaKnown RBP4.78□□□□□ -1.64
SHP1YBL058W RAI1P53063 387 aaKnown RBP4.78□□□□□ -1.64
SHP1YBL058W YGL159WP53110 370 aa4.78□□□□□ -1.64
SHP1YBL058W YGL114WP53134 725 aa4.78□□□□□ -1.64
SHP1YBL058W BUD17P53727 317 aa4.78□□□□□ -1.64
SHP1YBL058W YKR005CQ02203 525 aa4.78□□□□□ -1.64
SHP1YBL058W LOT6Q07923 191 aa4.78□□□□□ -1.64
SHP1YBL058W DIF1O13577 133 aa4.77□□□□□ -1.65
SHP1YBL058W PUT3P25502 979 aaPredicted RBP4.77□□□□□ -1.65
SHP1YBL058W AFG1P32317 509 aa4.77□□□□□ -1.65
SHP1YBL058W ZRT3P34240 503 aa4.77□□□□□ -1.65
SHP1YBL058W MTH1P35198 433 aa4.77□□□□□ -1.65
SHP1YBL058W CUE1P38428 203 aa4.77□□□□□ -1.65
SHP1YBL058W YND1P40009 630 aa4.77□□□□□ -1.65
SHP1YBL058W DLS1P40366 167 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms