RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C YGL114WP53134 725 aa0.93□□□□□ -2.26
YAR009CYAR009C HCH1P53834 153 aa0.93□□□□□ -2.26
YAR009CYAR009C CWC21Q03375 135 aaKnown RBP0.93□□□□□ -2.26
YAR009CYAR009C EBS1Q03466 884 aaKnown RBP0.93□□□□□ -2.26
YAR009CYAR009C YPR172WQ06608 200 aa0.93□□□□□ -2.26
YAR009CYAR009C BCY1P07278 416 aaKnown RBP0.93□□□□□ -2.26
YAR009CYAR009C PEX32P38292 413 aa0.93□□□□□ -2.26
YAR009CYAR009C YIR035CP40579 254 aa0.93□□□□□ -2.26
YAR009CYAR009C PFS2P42841 465 aaKnown RBP0.93□□□□□ -2.26
YAR009CYAR009C YCH1P42937 148 aa0.93□□□□□ -2.26
YAR009CYAR009C BOP2Q06150 570 aa0.93□□□□□ -2.26
YAR009CYAR009C RPN6Q12377 434 aa0.93□□□□□ -2.26
YAR009CYAR009C PRM7Q12459 698 aa0.93□□□□□ -2.26
YAR009CYAR009C HIS1P00498 297 aaKnown RBP0.93□□□□□ -2.26
YAR009CYAR009C CPA1P07258 411 aaKnown RBP0.93□□□□□ -2.26
YAR009CYAR009C FUS3P16892 353 aaKnown RBP0.93□□□□□ -2.26
YAR009CYAR009C DCC1P25559 380 aa0.93□□□□□ -2.26
YAR009CYAR009C YEL043WP32618 956 aa0.93□□□□□ -2.26
YAR009CYAR009C MRPL39P36533 70 aa0.93□□□□□ -2.26
YAR009CYAR009C END3P39013 349 aa0.93□□□□□ -2.26
YAR009CYAR009C YFL064CP43540 174 aa0.93□□□□□ -2.26
YAR009CYAR009C YFL051CP43552 160 aa0.93□□□□□ -2.26
YAR009CYAR009C HST4P53688 370 aa0.93□□□□□ -2.26
YAR009CYAR009C MPP6P53725 186 aaPredicted RBP0.93□□□□□ -2.26
YAR009CYAR009C PDR16P53860 351 aaKnown RBP0.93□□□□□ -2.26
YAR009CYAR009C SCS7Q03529 384 aa0.93□□□□□ -2.26
YAR009CYAR009C BUR2Q05949 395 aa0.93□□□□□ -2.26
YAR009CYAR009C GGA1Q06336 557 aa0.93□□□□□ -2.26
YAR009CYAR009C YPR174CQ06616 221 aaPredicted RBP0.93□□□□□ -2.26
YAR009CYAR009C YPR202WQ08993 238 aa0.93□□□□□ -2.26
YAR009CYAR009C SLF1Q12034 447 aaKnown RBP0.93□□□□□ -2.26
YAR009CYAR009C PSY3Q12318 242 aa0.93□□□□□ -2.26
YAR009CYAR009C VPS63O13549 108 aa0.92□□□□□ -2.26
YAR009CYAR009C VMA5P31412 392 aaKnown RBP0.92□□□□□ -2.26
YAR009CYAR009C SUI1P32911 108 aaKnown RBP0.92□□□□□ -2.26
YAR009CYAR009C KTI12P34253 313 aaKnown RBP0.92□□□□□ -2.26
YAR009CYAR009C EBP2P36049 427 aaKnown RBP0.92□□□□□ -2.26
YAR009CYAR009C TRR2P38816 342 aa0.92□□□□□ -2.26
YAR009CYAR009C YIR020CP40575 100 aa0.92□□□□□ -2.26
YAR009CYAR009C PET117Q02771 107 aa0.92□□□□□ -2.26
YAR009CYAR009C UTP15Q04305 513 aaKnown RBP0.92□□□□□ -2.26
YAR009CYAR009C SMD2Q06217 110 aaKnown RBP0.92□□□□□ -2.26
YAR009CYAR009C PFK27Q12471 397 aaPredicted RBP0.92□□□□□ -2.26
YAR009CYAR009C RBK1P25332 333 aa0.92□□□□□ -2.26
YAR009CYAR009C ITR2P30606 609 aa0.92□□□□□ -2.26
YAR009CYAR009C YIL012WP40551 113 aa0.92□□□□□ -2.26
YAR009CYAR009C RPS29AP41057 56 aaKnown RBP0.92□□□□□ -2.26
YAR009CYAR009C CDC123Q05791 360 aa0.92□□□□□ -2.26
YAR009CYAR009C APC2Q12440 853 aa0.92□□□□□ -2.26
YAR009CYAR009C NOT5Q12514 560 aaPredicted RBP0.92□□□□□ -2.26
YAR009CYAR009C TRX1P22217 103 aaKnown RBP0.92□□□□□ -2.26
YAR009CYAR009C RPB9P27999 122 aa0.92□□□□□ -2.26
YAR009CYAR009C MEI5P32489 222 aa0.92□□□□□ -2.26
YAR009CYAR009C MSN4P33749 630 aa0.92□□□□□ -2.26
YAR009CYAR009C ECO1P43605 281 aa0.92□□□□□ -2.26
YAR009CYAR009C YGR016WP53209 190 aa0.92□□□□□ -2.26
YAR009CYAR009C EMI1Q04406 187 aa0.92□□□□□ -2.26
YAR009CYAR009C APC4Q04601 652 aa0.92□□□□□ -2.26
YAR009CYAR009C YPS3Q12303 508 aa0.92□□□□□ -2.26
YAR009CYAR009C PST1Q12355 444 aa0.92□□□□□ -2.26
YAR009CYAR009C CDC33P07260 213 aaKnown RBP0.91□□□□□ -2.26
YAR009CYAR009C FRM2P37261 193 aa0.91□□□□□ -2.26
YAR009CYAR009C CAJ1P39101 391 aa0.91□□□□□ -2.26
YAR009CYAR009C NPT1P39683 429 aaKnown RBP0.91□□□□□ -2.26
YAR009CYAR009C NAS2P40555 220 aa0.91□□□□□ -2.26
YAR009CYAR009C EMC4P53073 190 aa0.91□□□□□ -2.26
YAR009CYAR009C PXR1P53335 271 aaPredicted RBP0.91□□□□□ -2.26
YAR009CYAR009C INP1Q03694 420 aa0.91□□□□□ -2.26
YAR009CYAR009C RVB1Q03940 463 aaKnown RBP0.91□□□□□ -2.26
YAR009CYAR009C YPR195CQ06594 109 aa0.91□□□□□ -2.26
YAR009CYAR009C RHO1P06780 209 aaKnown RBP0.91□□□□□ -2.26
YAR009CYAR009C RSR1P13856 272 aa0.91□□□□□ -2.26
YAR009CYAR009C ACB1P31787 87 aa0.91□□□□□ -2.26
YAR009CYAR009C CBF5P33322 483 aaKnown RBP RIP-Chip data0.91□□□□□ -2.26not detected
YAR009CYAR009C SMF2P38778 549 aa0.91□□□□□ -2.26
YAR009CYAR009C BDH1P39714 382 aa0.91□□□□□ -2.26
YAR009CYAR009C EMC2P47133 292 aaKnown RBP0.91□□□□□ -2.26
YAR009CYAR009C MIG2P53035 382 aa0.91□□□□□ -2.26
YAR009CYAR009C FMP48P53233 369 aa0.91□□□□□ -2.26
YAR009CYAR009C YMR244WQ04018 355 aa0.91□□□□□ -2.26
YAR009CYAR009C YDR124WQ04608 324 aa0.91□□□□□ -2.26
YAR009CYAR009C YDR286CQ05530 114 aa0.91□□□□□ -2.26
YAR009CYAR009C YRA1Q12159 226 aaKnown RBP0.91□□□□□ -2.26
YAR009CYAR009C RIO1Q12196 484 aaKnown RBP0.91□□□□□ -2.26
YAR009CYAR009C PRM4Q12498 284 aa0.91□□□□□ -2.26
YAR009CYAR009C COX10P21592 462 aa0.91□□□□□ -2.26
YAR009CYAR009C ROX3P25046 220 aa0.91□□□□□ -2.26
YAR009CYAR009C AST1P35183 429 aa0.91□□□□□ -2.26
YAR009CYAR009C SDH4P37298 181 aa0.91□□□□□ -2.26
YAR009CYAR009C TCD1P38756 429 aa0.91□□□□□ -2.26
YAR009CYAR009C LIN1P38852 340 aaPredicted RBP0.91□□□□□ -2.26
YAR009CYAR009C YGR168CP53293 376 aa0.91□□□□□ -2.26
YAR009CYAR009C MAL13P53338 473 aa0.91□□□□□ -2.26
YAR009CYAR009C YLR460CP54007 376 aa0.91□□□□□ -2.26
YAR009CYAR009C NCE101Q02820 53 aa0.91□□□□□ -2.26
YAR009CYAR009C VPS71Q03433 280 aa0.91□□□□□ -2.26
YAR009CYAR009C GMC1Q04399 608 aa0.91□□□□□ -2.26
YAR009CYAR009C MRX9Q07349 420 aaKnown RBP0.91□□□□□ -2.26
YAR009CYAR009C DTD1Q07648 150 aaKnown RBP0.91□□□□□ -2.26
YAR009CYAR009C TPO4Q12256 659 aa0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms