RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C GTF1P53260 183 aaPredicted RBP3.65□□□□□ -1.83
PTA1YAL043C YPL113CQ02961 396 aa3.65□□□□□ -1.83
PTA1YAL043C SNT309Q06091 175 aaPredicted RBP3.65□□□□□ -1.83
PTA1YAL043C CTS2Q06350 511 aa3.65□□□□□ -1.83
PTA1YAL043C YPR174CQ06616 221 aaPredicted RBP3.65□□□□□ -1.83
PTA1YAL043C YDR262WQ12331 272 aa3.65□□□□□ -1.83
PTA1YAL043C TRM13Q12383 476 aa3.65□□□□□ -1.83
PTA1YAL043C BRR2P32639 2163 aaKnown RBP3.64□□□□□ -1.83
PTA1YAL043C BEM2P39960 2167 aaKnown RBP3.64□□□□□ -1.83
PTA1YAL043C CDC36P06100 191 aaPredicted RBP3.64□□□□□ -1.83
PTA1YAL043C CBP6P07253 162 aaPredicted RBP3.64□□□□□ -1.83
PTA1YAL043C YSF3P0C074 85 aaPredicted RBP3.64□□□□□ -1.83
PTA1YAL043C SEC12P11655 471 aa3.64□□□□□ -1.83
PTA1YAL043C URA6P15700 204 aa3.64□□□□□ -1.83
PTA1YAL043C OLE1P21147 510 aaKnown RBP3.64□□□□□ -1.83
PTA1YAL043C CAM1P29547 415 aaKnown RBP3.64□□□□□ -1.83
PTA1YAL043C PMT2P31382 759 aa3.64□□□□□ -1.83
PTA1YAL043C HOG1P32485 435 aa3.64□□□□□ -1.83
PTA1YAL043C AGA2P32781 87 aa3.64□□□□□ -1.83
PTA1YAL043C PAD1P33751 242 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
PTA1YAL043C GCV3P39726 170 aaPredicted RBP3.64□□□□□ -1.83
PTA1YAL043C BMT5P40493 336 aa3.64□□□□□ -1.83
PTA1YAL043C SPG5P42933 373 aa3.64□□□□□ -1.83
PTA1YAL043C CWC24P53769 259 aa3.64□□□□□ -1.83
PTA1YAL043C SNX41Q04053 625 aa3.64□□□□□ -1.83
PTA1YAL043C FSH3Q99369 266 aa3.64□□□□□ -1.83
PTA1YAL043C Q0142Q9ZZW4 58 aa3.64□□□□□ -1.83
PTA1YAL043C AI1P03875 834 aa3.63□□□□□ -1.83
PTA1YAL043C SCEIP03882 235 aa3.63□□□□□ -1.83
PTA1YAL043C OPI3P05375 206 aa3.63□□□□□ -1.83
PTA1YAL043C ARF1P11076 181 aaKnown RBP3.63□□□□□ -1.83
PTA1YAL043C FPR1P20081 114 aaKnown RBP3.63□□□□□ -1.83
PTA1YAL043C SCL1P21243 252 aaKnown RBP3.63□□□□□ -1.83
PTA1YAL043C APA2P22108 325 aa3.63□□□□□ -1.83
PTA1YAL043C VMA16P23968 213 aa3.63□□□□□ -1.83
PTA1YAL043C PET18P25362 215 aa3.63□□□□□ -1.83
PTA1YAL043C MLF3P32047 452 aa3.63□□□□□ -1.83
PTA1YAL043C HSP150P32478 413 aa3.63□□□□□ -1.83
PTA1YAL043C NAB2P32505 525 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
PTA1YAL043C ECM25P32525 599 aa3.63□□□□□ -1.83
PTA1YAL043C EMP24P32803 203 aaKnown RBP3.63□□□□□ -1.83
PTA1YAL043C TRS65P32893 560 aa3.63□□□□□ -1.83
PTA1YAL043C DLS1P40366 167 aa3.63□□□□□ -1.83
PTA1YAL043C YIL067CP40514 678 aa3.63□□□□□ -1.83
PTA1YAL043C HIS6P40545 261 aa3.63□□□□□ -1.83
PTA1YAL043C GLR1P41921 483 aaKnown RBP3.63□□□□□ -1.83
PTA1YAL043C YJR056CP47115 236 aa3.63□□□□□ -1.83
PTA1YAL043C SLX9P53251 210 aaPredicted RBP3.63□□□□□ -1.83
PTA1YAL043C ODC1Q03028 310 aa3.63□□□□□ -1.83
PTA1YAL043C YDR248CQ03786 193 aa3.63□□□□□ -1.83
PTA1YAL043C GIM5Q04493 163 aa3.63□□□□□ -1.83
PTA1YAL043C SEI1Q06058 285 aa3.63□□□□□ -1.83
PTA1YAL043C YOL107WQ12239 342 aa3.63□□□□□ -1.83
PTA1YAL043C SNU23Q12368 194 aaPredicted RBP3.63□□□□□ -1.83
PTA1YAL043C PRM4Q12498 284 aa3.63□□□□□ -1.83
PTA1YAL043C YHR213W-AQ8TGT4 77 aa3.63□□□□□ -1.83
PTA1YAL043C BLM10P43583 2143 aa3.63□□□□□ -1.83
PTA1YAL043C HIS5P07172 385 aa3.63□□□□□ -1.83
PTA1YAL043C ISC10P32645 267 aa3.63□□□□□ -1.83
PTA1YAL043C CBT1P36038 271 aaPredicted RBP3.63□□□□□ -1.83
PTA1YAL043C CFD1P40558 293 aa3.63□□□□□ -1.83
PTA1YAL043C SEH1P53011 349 aaKnown RBP3.63□□□□□ -1.83
PTA1YAL043C PKP2P53170 491 aa3.63□□□□□ -1.83
PTA1YAL043C PBP1P53297 722 aaKnown RBP3.63□□□□□ -1.83
PTA1YAL043C TDA7P53882 636 aaPredicted RBP3.63□□□□□ -1.83
PTA1YAL043C ACS1Q01574 713 aa3.63□□□□□ -1.83
PTA1YAL043C YPR127WQ06494 345 aa3.63□□□□□ -1.83
PTA1YAL043C LEU9Q12166 604 aaKnown RBP3.63□□□□□ -1.83
PTA1YAL043C RRI1Q12468 440 aa3.63□□□□□ -1.83
PTA1YAL043C POL2P21951 2222 aaKnown RBP3.63□□□□□ -1.83
PTA1YAL043C CDC34P14682 295 aa3.62□□□□□ -1.83
PTA1YAL043C SNF5P18480 905 aa3.62□□□□□ -1.83
PTA1YAL043C PPZ2P33329 710 aa3.62□□□□□ -1.83
PTA1YAL043C YNK1P36010 153 aaKnown RBP3.62□□□□□ -1.83
PTA1YAL043C UMP1P38293 148 aa3.62□□□□□ -1.83
PTA1YAL043C VBA2P38358 474 aaKnown RBP3.62□□□□□ -1.83
PTA1YAL043C PFS1P38872 237 aa3.62□□□□□ -1.83
PTA1YAL043C YJL016WP47072 561 aa3.62□□□□□ -1.83
PTA1YAL043C AIM24P47127 394 aa3.62□□□□□ -1.83
PTA1YAL043C PHB2P50085 310 aa3.62□□□□□ -1.83
PTA1YAL043C TEX1P53851 422 aaKnown RBP3.62□□□□□ -1.83
PTA1YAL043C HXT11P54862 567 aa3.62□□□□□ -1.83
PTA1YAL043C ADD37Q03233 198 aa3.62□□□□□ -1.83
PTA1YAL043C TSA2Q04120 196 aa3.62□□□□□ -1.83
PTA1YAL043C SEN15Q04675 128 aa3.62□□□□□ -1.83
PTA1YAL043C NOC4Q06512 552 aaPredicted RBP3.62□□□□□ -1.83
PTA1YAL043C BER1Q06688 274 aaKnown RBP3.62□□□□□ -1.83
PTA1YAL043C THI72Q08579 599 aa3.62□□□□□ -1.83
PTA1YAL043C TGS1Q12052 315 aa3.62□□□□□ -1.83
PTA1YAL043C YOR015WQ12169 119 aa3.62□□□□□ -1.83
PTA1YAL043C VMA9Q3E7B6 73 aa3.62□□□□□ -1.83
PTA1YAL043C ZRC1P20107 442 aa3.62□□□□□ -1.83
PTA1YAL043C VMA5P31412 392 aaKnown RBP3.62□□□□□ -1.83
PTA1YAL043C ERG3P32353 365 aa3.62□□□□□ -1.83
PTA1YAL043C ARO4P32449 370 aaKnown RBP3.62□□□□□ -1.83
PTA1YAL043C YOR062CP36025 268 aa3.62□□□□□ -1.83
PTA1YAL043C SRX1P36077 127 aa3.62□□□□□ -1.83
PTA1YAL043C YKL071WP36086 256 aa3.62□□□□□ -1.83
PTA1YAL043C RIB5P38145 238 aa3.62□□□□□ -1.83
PTA1YAL043C PRS3P38689 320 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms