RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PHF20Q9BVI0 1012 aa7.62□□□□□ -1.19
PRPF40B-214ENST00000551320 FOXQ1Q9C009 403 aa7.62□□□□□ -1.19
PRPF40B-214ENST00000551320 INO80BQ9C086 356 aaPredicted RBP7.62□□□□□ -1.19
PRPF40B-214ENST00000551320 DHX33Q9H6R0 707 aaKnown RBP7.62□□□□□ -1.19
PRPF40B-214ENST00000551320 SH3GLB2Q9NR46 395 aa7.62□□□□□ -1.19
PRPF40B-214ENST00000551320 CHST12Q9NRB3 414 aa7.62□□□□□ -1.19
PRPF40B-214ENST00000551320 MRPL17Q9NRX2 175 aaKnown RBP7.62□□□□□ -1.19
PRPF40B-214ENST00000551320 PARP2Q9UGN5 583 aa7.62□□□□□ -1.19
PRPF40B-214ENST00000551320 CYP46A1Q9Y6A2 500 aa7.62□□□□□ -1.19
PRPF40B-214ENST00000551320 CEP250Q9BV73 2442 aa7.62□□□□□ -1.19
PRPF40B-214ENST00000551320 CASTOR2A6NHX0 329 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 TGM5O43548 720 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 USO1O60763 962 aaKnown RBP7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 ZNF623O75123 536 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 SLITRK3O94933 977 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 P4HBP07237 508 aaKnown RBP7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 GLULP15104 373 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 ARF4P18085 180 aaPredicted RBP7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 GLRA2P23416 452 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 TXKP42681 527 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 EVCP57679 992 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 SH3BP2P78314 561 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 MBTD1Q05BQ5 628 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 PPP2R5CQ13362 524 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 TDGQ13569 410 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 AGERQ15109 404 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 ANGPT1Q15389 498 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 RTP2Q5QGT7 225 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 KIAA0319Q5VV43 1072 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 EEF1DP3Q658K8 133 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 LIAT1Q6ZQX7 453 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 KRT25Q7Z3Z0 450 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 NEK8Q86SG6 692 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 FERMT3Q86UX7 667 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 CEP57Q86XR8 500 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 NOSTRINQ8IVI9 506 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 UBALD2Q8IYN6 164 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 SLC44A3Q8N4M1 653 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 DTWD2Q8NBA8 298 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 DAGLBQ8NCG7 672 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 GSTCDQ8NEC7 633 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 KCNG4Q8TDN1 519 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 GPR152Q8TDT2 470 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 PSPC1Q8WXF1 523 aaKnown RBP7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 SLC7A3Q8WY07 619 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 ING5Q8WYH8 240 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 CALR3Q96L12 384 aaKnown RBP7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 NECTIN4Q96NY8 510 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 RPS6KC1Q96S38 1066 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 EIF2AK1Q9BQI3 630 aaKnown RBP7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 KIFC3Q9BVG8 833 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 POLR3FQ9H1D9 316 aaPredicted RBP7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 TMEM60Q9H2L4 133 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 SFXN1Q9H9B4 322 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 DZANK1Q9NVP4 752 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 HCFC1R1Q9NWW0 138 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 POLIQ9UNA4 740 aa7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 MTF2Q9Y483 593 aaPredicted RBP7.61□□□□□ -1.19
PRPF40B-214ENST00000551320 CACNA1IQ9P0X4 2223 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 DENND4AQ7Z401 1863 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 DOCK8Q8NF50 2099 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 BTBD18B2RXH4 712 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 CCL16O15467 120 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 GAS2O43903 313 aaKnown RBP7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 ERLIN2O94905 339 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 GLUD1P00367 558 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 SOD2P04179 222 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 URODP06132 367 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 NCLP19338 710 aaKnown RBP7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 PSMA5P28066 241 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 HOXC13P31276 330 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 RPIAP49247 311 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 GLUD2P49448 558 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 PTENP60484 403 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 ST3GAL1Q11201 340 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 EPHA7Q15375 998 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 GLRA4Q5JXX5 417 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 MCTP2Q6DN12 878 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 PARM1Q6UWI2 310 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 RSPO2Q6UXX9 243 aaPredicted RBP7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 GRASPQ7Z6J2 395 aaPredicted RBP7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 BPHLQ86WA6 291 aaPredicted RBP7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 KIAA2013Q8IYS2 634 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 RDM1Q8NG50 284 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 ITFG1Q8TB96 612 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 ADAM32Q8TC27 787 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 PGBD4Q96DM1 585 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 ZNF274Q96GC6 653 aaPredicted RBP7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 ARID3AQ99856 593 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 KXD1Q9BQD3 176 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 HERC2P3Q9BVR0 1158 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 TRAIPQ9BWF2 469 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 EMILIN2Q9BXX0 1053 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 ALG2Q9H553 416 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 TBC1D17Q9HA65 648 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 PIDD1Q9HB75 910 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 ORC3Q9UBD5 711 aaPredicted RBP7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 GDAQ9Y2T3 454 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 IRAK3Q9Y616 596 aa7.6□□□□□ -1.19
PRPF40B-214ENST00000551320 CACNA1AO00555 2505 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 1123.2 ms