RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 ZNF131P52739 623 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 ATAT1Q5SQI0 421 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 RARS2Q5T160 578 aaKnown RBP23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 C15orf39Q6ZRI6 1047 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 CMASQ8NFW8 434 aaPredicted RBP23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 HDAC7Q8WUI4 952 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 LARP4BQ92615 738 aaKnown RBP23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 REEP2Q9BRK0 252 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 PAAF1Q9BRP4 392 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 TCHPQ9BT92 498 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 RHOBTB2Q9BYZ6 727 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 SLC38A7Q9NVC3 462 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 STK17AQ9UEE5 414 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 MUTYHQ9UIF7 546 aa23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 FBXO2Q9UK22 296 aaPredicted RBP23.35■■□□□ 1.33
UBE2D3-201ENST00000321805 KIF4AO95239 1232 aa23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 TXLNAP40222 546 aa23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 NOLC1Q14978 699 aaKnown RBP eCLIP23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 PDXDC1Q6P996 788 aa23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 ALKAL1Q6UXT8 129 aa23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 CYP26C1Q6V0L0 522 aa23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 CEP120Q8N960 986 aa23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 LRRC15Q8TF66 581 aa23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 POMKQ9H5K3 350 aa23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 PARVGQ9HBI0 331 aa23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 CCDC39Q9UFE4 941 aa23.34■■□□□ 1.33
UBE2D3-201ENST00000321805 SPDYE4A6NLX3 237 aa23.33■■□□□ 1.33
UBE2D3-201ENST00000321805 FAM13AO94988 1023 aa23.33■■□□□ 1.33
UBE2D3-201ENST00000321805 GPR149Q86SP6 731 aa23.33■■□□□ 1.33
UBE2D3-201ENST00000321805 RIN2Q8WYP3 895 aaPredicted RBP23.33■■□□□ 1.33
UBE2D3-201ENST00000321805 SNX27Q96L92 541 aa23.33■■□□□ 1.33
UBE2D3-201ENST00000321805 ACAP3Q96P50 834 aa23.33■■□□□ 1.33
UBE2D3-201ENST00000321805 CXCL16Q9H2A7 254 aa23.33■■□□□ 1.33
UBE2D3-201ENST00000321805 USTQ9Y2C2 406 aa23.33■■□□□ 1.33
UBE2D3-201ENST00000321805 DENND4AQ7Z401 1863 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 NPHP3-ACAD11A0A0J9YXS1 232 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 SMIM28A0A1B0GU29 152 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 KRT18P05783 430 aaKnown RBP23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 KCNE1P15382 129 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 MARCKSP29966 332 aaPredicted RBP23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 DDIT3P35638 169 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 MCL1Q07820 350 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 MCM6Q14566 821 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 GLRA4Q5JXX5 417 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 DCLRE1AQ6PJP8 1040 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 HAUS6Q7Z4H7 955 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 ZBTB33Q86T24 672 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 HSCBQ8IWL3 235 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 C12orf76Q8N812 135 aaPredicted RBP23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 PIK3R5Q8WYR1 880 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 TTPALQ9BTX7 342 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 PLEKHA4Q9H4M7 779 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 MAN1C1Q9NR34 630 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 CNTN3Q9P232 1028 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 CACNG4Q9UBN1 327 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 PLXNA3P51805 1871 aa23.32■■□□□ 1.32
UBE2D3-201ENST00000321805 MTCL1Q9Y4B5 1905 aaKnown RBP23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 CLDN3O15551 220 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 TBCAO75347 108 aaKnown RBP23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 PAPLNO95428 1278 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 PIGRP01833 764 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 CACNB1Q02641 598 aaPredicted RBP23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 SLC39A14Q15043 492 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 KYAT1Q16773 422 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 RTP2Q5QGT7 225 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 FAM173BQ6P4H8 233 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 TMC5Q6UXY8 1006 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 MYCT1Q8N699 235 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 RABGGTAQ92696 567 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 EDAQ92838 391 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 DDX27Q96GQ7 796 aaKnown RBP23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 EPSTI1Q96J88 318 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 USP28Q96RU2 1077 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 ANKFY1Q9P2R3 1169 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 MYH15Q9Y2K3 1946 aa23.31■■□□□ 1.32
UBE2D3-201ENST00000321805 FAM86C2PA6NEL3 165 aa23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 K7ENM7 598 aa23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 TRAK2O60296 914 aa23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 NASPP49321 788 aaPredicted RBP23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 DHX8Q14562 1220 aaKnown RBP23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 UPP1Q16831 310 aa23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 FAM171A1Q5VUB5 890 aa23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 HASPINQ8TF76 798 aa23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 B3GALT6Q96L58 329 aa23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 FOXD4L1Q9NU39 408 aa23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 ARIH1Q9Y4X5 557 aaPredicted RBP23.3■■□□□ 1.32
UBE2D3-201ENST00000321805 TRAPPC3O43617 180 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 B3GAT3O94766 335 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 CLCNKBP51801 687 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 OSTNP61366 133 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 PDCD11Q14690 1871 aaKnown RBP23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 CCDC149Q6ZUS6 474 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 KRI1Q8N9T8 703 aaKnown RBP23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 BICD1Q96G01 975 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 ZBTB45Q96K62 511 aaPredicted RBP23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 PLEKHA5Q9HAU0 1116 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 ZDHHC7Q9NXF8 308 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 CDH22Q9UJ99 828 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms