RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C RPT5P33297 434 aaKnown RBP2.32□□□□□ -2.04
RPC40YPR110C YUH1P35127 236 aa2.32□□□□□ -2.04
RPC40YPR110C HSM3P38348 480 aa2.32□□□□□ -2.04
RPC40YPR110C AVT7P40501 490 aa2.32□□□□□ -2.04
RPC40YPR110C PRP24P49960 444 aaKnown RBP2.32□□□□□ -2.04
RPC40YPR110C UFD1P53044 361 aa2.32□□□□□ -2.04
RPC40YPR110C MPP6P53725 186 aaPredicted RBP2.32□□□□□ -2.04
RPC40YPR110C ZRG17P53735 605 aa2.32□□□□□ -2.04
RPC40YPR110C MNT4P53745 580 aa2.32□□□□□ -2.04
RPC40YPR110C YPL113CQ02961 396 aa2.32□□□□□ -2.04
RPC40YPR110C VPS60Q03390 229 aa2.32□□□□□ -2.04
RPC40YPR110C SFH1Q06168 426 aa2.32□□□□□ -2.04
RPC40YPR110C LOA1Q06508 300 aa2.32□□□□□ -2.04
RPC40YPR110C RRT8Q08219 342 aa2.32□□□□□ -2.04
RPC40YPR110C YPL278CQ08990 100 aa2.32□□□□□ -2.04
RPC40YPR110C YAL064W-BO13512 126 aa2.31□□□□□ -2.04
RPC40YPR110C RPP0P05317 312 aaKnown RBP2.31□□□□□ -2.04
RPC40YPR110C RPS3P05750 240 aaKnown RBP2.31□□□□□ -2.04
RPC40YPR110C MSF1P08425 469 aa2.31□□□□□ -2.04
RPC40YPR110C PHO80P20052 293 aa2.31□□□□□ -2.04
RPC40YPR110C ATG15P25641 520 aa2.31□□□□□ -2.04
RPC40YPR110C ARO4P32449 370 aaKnown RBP2.31□□□□□ -2.04
RPC40YPR110C COA1P40452 197 aa2.31□□□□□ -2.04
RPC40YPR110C SYS1P41544 203 aa2.31□□□□□ -2.04
RPC40YPR110C COS4P43542 379 aa2.31□□□□□ -2.04
RPC40YPR110C COG7P53195 279 aa2.31□□□□□ -2.04
RPC40YPR110C PEX31P53203 462 aa2.31□□□□□ -2.04
RPC40YPR110C SEC10Q06245 871 aa2.31□□□□□ -2.04
RPC40YPR110C SSK22P25390 1331 aaPredicted RBP2.31□□□□□ -2.04
RPC40YPR110C RPO41P13433 1351 aaKnown RBP2.31□□□□□ -2.04
RPC40YPR110C RSF2P46974 1380 aa2.31□□□□□ -2.04
RPC40YPR110C OSM1P21375 501 aaKnown RBP2.3□□□□□ -2.04
RPC40YPR110C POF1P25576 258 aa2.3□□□□□ -2.04
RPC40YPR110C IMP1P28627 190 aa2.3□□□□□ -2.04
RPC40YPR110C PEX3P28795 441 aa2.3□□□□□ -2.04
RPC40YPR110C ALK2P32789 676 aaPredicted RBP2.3□□□□□ -2.04
RPC40YPR110C AVT6P40074 448 aa2.3□□□□□ -2.04
RPC40YPR110C DDI1P40087 428 aa2.3□□□□□ -2.04
RPC40YPR110C YIR035CP40579 254 aa2.3□□□□□ -2.04
RPC40YPR110C YFR045WP43617 309 aa2.3□□□□□ -2.04
RPC40YPR110C ASG7P46993 209 aa2.3□□□□□ -2.04
RPC40YPR110C ALG11P53954 548 aaKnown RBP2.3□□□□□ -2.04
RPC40YPR110C RRN5Q02983 363 aa2.3□□□□□ -2.04
RPC40YPR110C SDC1Q03323 175 aa2.3□□□□□ -2.04
RPC40YPR110C COX20Q04935 205 aa2.3□□□□□ -2.04
RPC40YPR110C ARV1Q06541 321 aa2.3□□□□□ -2.04
RPC40YPR110C SGT2Q12118 346 aaKnown RBP2.3□□□□□ -2.04
RPC40YPR110C SME1Q12330 94 aaPredicted RBP2.3□□□□□ -2.04
RPC40YPR110C YOS9Q99220 542 aa2.3□□□□□ -2.04
RPC40YPR110C SIR4P11978 1358 aa2.3□□□□□ -2.04
RPC40YPR110C ROM2P51862 1356 aaKnown RBP2.29□□□□□ -2.04
RPC40YPR110C HIS1P00498 297 aaKnown RBP2.29□□□□□ -2.04
RPC40YPR110C RSR1P13856 272 aa2.29□□□□□ -2.04
RPC40YPR110C PRE7P23724 241 aaKnown RBP2.29□□□□□ -2.04
RPC40YPR110C RRT12P25381 491 aa2.29□□□□□ -2.04
RPC40YPR110C COT1P32798 439 aa2.29□□□□□ -2.04
RPC40YPR110C COY1P34237 679 aa2.29□□□□□ -2.04
RPC40YPR110C YHI9P38765 294 aa2.29□□□□□ -2.04
RPC40YPR110C SMC2P38989 1170 aaKnown RBP2.29□□□□□ -2.04
RPC40YPR110C SHC1P39000 512 aa2.29□□□□□ -2.04
RPC40YPR110C SEN34P39707 275 aa2.29□□□□□ -2.04
RPC40YPR110C RTR1P40084 226 aaPredicted RBP2.29□□□□□ -2.04
RPC40YPR110C SER33P40510 469 aa2.29□□□□□ -2.04
RPC40YPR110C YIL012WP40551 113 aa2.29□□□□□ -2.04
RPC40YPR110C TAD2P47058 250 aa2.29□□□□□ -2.04
RPC40YPR110C NBP35P52920 328 aa2.29□□□□□ -2.04
RPC40YPR110C SWS2P53937 143 aa2.29□□□□□ -2.04
RPC40YPR110C MRS2Q01926 470 aa2.29□□□□□ -2.04
RPC40YPR110C PER33Q12144 273 aa2.29□□□□□ -2.04
RPC40YPR110C UTP10P42945 1769 aaKnown RBP2.28□□□□□ -2.04
RPC40YPR110C DAL82P21705 255 aa2.28□□□□□ -2.04
RPC40YPR110C KRE6P32486 720 aa2.28□□□□□ -2.04
RPC40YPR110C FMT1P32785 401 aa2.28□□□□□ -2.04
RPC40YPR110C PRY2P36110 329 aa2.28□□□□□ -2.04
RPC40YPR110C MED8P38304 223 aa2.28□□□□□ -2.04
RPC40YPR110C ATG12P38316 186 aa2.28□□□□□ -2.04
RPC40YPR110C DED81P38707 554 aaKnown RBP2.28□□□□□ -2.04
RPC40YPR110C YJL118WP47022 219 aa2.28□□□□□ -2.04
RPC40YPR110C OSH6Q02201 448 aa2.28□□□□□ -2.04
RPC40YPR110C GRX3Q03835 250 aa2.28□□□□□ -2.04
RPC40YPR110C TVP15Q03860 143 aa2.28□□□□□ -2.04
RPC40YPR110C ATG5Q12380 294 aa2.28□□□□□ -2.04
RPC40YPR110C YMR316C-AI2HB70 103 aa2.27□□□□□ -2.05
RPC40YPR110C CDC42P19073 191 aa2.27□□□□□ -2.05
RPC40YPR110C VPS1P21576 704 aaKnown RBP2.27□□□□□ -2.05
RPC40YPR110C AGA2P32781 87 aa2.27□□□□□ -2.05
RPC40YPR110C POP8P38208 133 aa2.27□□□□□ -2.05
RPC40YPR110C PRS2P38620 318 aaKnown RBP2.27□□□□□ -2.05
RPC40YPR110C TIM21P53220 239 aa2.27□□□□□ -2.05
RPC40YPR110C FMP41P53889 259 aaKnown RBP2.27□□□□□ -2.05
RPC40YPR110C OST6Q03723 332 aa2.27□□□□□ -2.05
RPC40YPR110C GTO3Q04806 366 aa2.27□□□□□ -2.05
RPC40YPR110C ADH6Q04894 360 aaKnown RBP2.27□□□□□ -2.05
RPC40YPR110C NNT1Q05874 261 aa2.27□□□□□ -2.05
RPC40YPR110C CTS2Q06350 511 aa2.27□□□□□ -2.05
RPC40YPR110C CTR3Q06686 241 aa2.27□□□□□ -2.05
RPC40YPR110C IES3Q12345 250 aa2.27□□□□□ -2.05
RPC40YPR110C AI5_BETAQ9ZZX0 354 aa2.27□□□□□ -2.05
RPC40YPR110C YOL163WP0CF20 169 aa2.26□□□□□ -2.05
RPC40YPR110C RPL4AP10664 362 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms