RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C SSU72P53538 206 aaPredicted RBP2.42□□□□□ -2.02
CCL1YPR025C ATC1Q04005 294 aa2.42□□□□□ -2.02
CCL1YPR025C COX20Q04935 205 aa2.42□□□□□ -2.02
CCL1YPR025C SME1Q12330 94 aaPredicted RBP2.42□□□□□ -2.02
CCL1YPR025C TOM40P23644 387 aaKnown RBP2.41□□□□□ -2.02
CCL1YPR025C BMH1P29311 267 aaKnown RBP2.41□□□□□ -2.02
CCL1YPR025C PRM9P39551 298 aa2.41□□□□□ -2.02
CCL1YPR025C DDI1P40087 428 aa2.41□□□□□ -2.02
CCL1YPR025C AGX1P43567 385 aa2.41□□□□□ -2.02
CCL1YPR025C YJR012CP47087 207 aa2.41□□□□□ -2.02
CCL1YPR025C SLX9P53251 210 aaPredicted RBP2.41□□□□□ -2.02
CCL1YPR025C ALG11P53954 548 aaKnown RBP2.41□□□□□ -2.02
CCL1YPR025C RNH1Q04740 348 aa2.41□□□□□ -2.02
CCL1YPR025C PEX10Q05568 337 aa2.41□□□□□ -2.02
CCL1YPR025C AGC1Q12482 902 aa2.41□□□□□ -2.02
CCL1YPR025C COX2P00410 251 aa2.4□□□□□ -2.03
CCL1YPR025C MRP1P10662 321 aaKnown RBP2.4□□□□□ -2.03
CCL1YPR025C POL30P15873 258 aaKnown RBP2.4□□□□□ -2.03
CCL1YPR025C RPL10P41805 221 aaKnown RBP2.4□□□□□ -2.03
CCL1YPR025C YJR141WP47172 347 aaPredicted RBP2.4□□□□□ -2.03
CCL1YPR025C NUP84P52891 726 aa2.4□□□□□ -2.03
CCL1YPR025C NBP1P52919 319 aaPredicted RBP2.4□□□□□ -2.03
CCL1YPR025C RDS3Q06835 107 aaPredicted RBP2.4□□□□□ -2.03
CCL1YPR025C TY3A-GQ12173 290 aa2.4□□□□□ -2.03
CCL1YPR025C TY3A-IQ99219 290 aa2.4□□□□□ -2.03
CCL1YPR025C STH1P32597 1359 aa2.39□□□□□ -2.03
CCL1YPR025C RAD10P06838 210 aa2.39□□□□□ -2.03
CCL1YPR025C DAL82P21705 255 aa2.39□□□□□ -2.03
CCL1YPR025C EBS1Q03466 884 aaKnown RBP2.39□□□□□ -2.03
CCL1YPR025C GRX3Q03835 250 aa2.39□□□□□ -2.03
CCL1YPR025C GRH1Q04410 372 aaKnown RBP2.39□□□□□ -2.03
CCL1YPR025C CDD1Q06549 142 aa2.39□□□□□ -2.03
CCL1YPR025C BTS1Q12051 335 aa2.39□□□□□ -2.03
CCL1YPR025C YOL107WQ12239 342 aa2.39□□□□□ -2.03
CCL1YPR025C DPB2P24482 689 aaPredicted RBP2.38□□□□□ -2.03
CCL1YPR025C QRI5P32344 111 aa2.38□□□□□ -2.03
CCL1YPR025C SFC1P33303 322 aa2.38□□□□□ -2.03
CCL1YPR025C SPT8P38915 602 aa2.38□□□□□ -2.03
CCL1YPR025C YJL028WP47062 111 aa2.38□□□□□ -2.03
CCL1YPR025C CTS2Q06350 511 aa2.38□□□□□ -2.03
CCL1YPR025C PLB3Q08108 686 aa2.38□□□□□ -2.03
CCL1YPR025C SMT3Q12306 101 aaKnown RBP2.38□□□□□ -2.03
CCL1YPR025C PST1Q12355 444 aa2.38□□□□□ -2.03
CCL1YPR025C NOT5Q12514 560 aaPredicted RBP2.38□□□□□ -2.03
CCL1YPR025C YPL119C-AQ3E751 87 aa2.38□□□□□ -2.03
CCL1YPR025C RSR1P13856 272 aa2.37□□□□□ -2.03
CCL1YPR025C MAL32P38158 584 aa2.37□□□□□ -2.03
CCL1YPR025C TEM1P38987 245 aa2.37□□□□□ -2.03
CCL1YPR025C YAR1P46683 200 aa2.37□□□□□ -2.03
CCL1YPR025C MAL12P53341 584 aa2.37□□□□□ -2.03
CCL1YPR025C AAH1P53909 347 aa2.37□□□□□ -2.03
CCL1YPR025C YNL134CP53912 376 aaKnown RBP2.37□□□□□ -2.03
CCL1YPR025C RGM1Q00453 211 aa2.37□□□□□ -2.03
CCL1YPR025C ADH6Q04894 360 aaKnown RBP2.37□□□□□ -2.03
CCL1YPR025C BOP2Q06150 570 aa2.37□□□□□ -2.03
CCL1YPR025C YLR173WQ06247 608 aa2.37□□□□□ -2.03
CCL1YPR025C YPL247CQ12523 523 aa2.37□□□□□ -2.03
CCL1YPR025C POX1P13711 748 aa2.36□□□□□ -2.03
CCL1YPR025C VPS3P23643 1011 aa2.36□□□□□ -2.03
CCL1YPR025C RNP1P32385 249 aa2.36□□□□□ -2.03
CCL1YPR025C YHR045WP38775 560 aa2.36□□□□□ -2.03
CCL1YPR025C DSN1P40568 576 aa2.36□□□□□ -2.03
CCL1YPR025C GON7P46984 123 aa2.36□□□□□ -2.03
CCL1YPR025C MDM34P53083 459 aa2.36□□□□□ -2.03
CCL1YPR025C SLD7Q08457 257 aa2.36□□□□□ -2.03
CCL1YPR025C YOR268CQ08734 132 aa2.36□□□□□ -2.03
CCL1YPR025C GDH2P33327 1092 aaKnown RBP2.35□□□□□ -2.03
CCL1YPR025C PRS2P38620 318 aaKnown RBP2.35□□□□□ -2.03
CCL1YPR025C DSK2P48510 373 aa2.35□□□□□ -2.03
CCL1YPR025C EMI1Q04406 187 aa2.35□□□□□ -2.03
CCL1YPR025C GEP5Q12393 293 aa2.35□□□□□ -2.03
CCL1YPR025C MSF1P08425 469 aa2.34□□□□□ -2.03
CCL1YPR025C DPM1P14020 267 aaKnown RBP2.34□□□□□ -2.03
CCL1YPR025C SNF6P18888 332 aa2.34□□□□□ -2.03
CCL1YPR025C CWP1P28319 239 aa2.34□□□□□ -2.03
CCL1YPR025C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
CCL1YPR025C JEN1P36035 616 aa2.34□□□□□ -2.03
CCL1YPR025C BIG1P38813 335 aa2.34□□□□□ -2.03
CCL1YPR025C BNA6P43619 295 aa2.34□□□□□ -2.03
CCL1YPR025C LIA1P47120 325 aaKnown RBP2.34□□□□□ -2.03
CCL1YPR025C YDR209CQ03480 137 aa2.34□□□□□ -2.03
CCL1YPR025C MYO5Q04439 1219 aaKnown RBP2.34□□□□□ -2.03
CCL1YPR025C YMR114CQ04471 368 aaKnown RBP2.34□□□□□ -2.03
CCL1YPR025C SUE1Q06524 206 aa2.34□□□□□ -2.03
CCL1YPR025C YPR011CQ12251 326 aa2.34□□□□□ -2.03
CCL1YPR025C YBL008W-AQ3E821 79 aa2.34□□□□□ -2.03
CCL1YPR025C CFT1Q06632 1357 aaKnown RBP2.34□□□□□ -2.04
CCL1YPR025C YJR146WP47174 117 aa2.33□□□□□ -2.04
CCL1YPR025C PET117Q02771 107 aa2.33□□□□□ -2.04
CCL1YPR025C SPO77Q06134 477 aa2.33□□□□□ -2.04
CCL1YPR025C RPL26AP05743 127 aaKnown RBP2.32□□□□□ -2.04
CCL1YPR025C PPH21P23594 369 aa2.32□□□□□ -2.04
CCL1YPR025C ECM13P38195 257 aa2.32□□□□□ -2.04
CCL1YPR025C SMB1P40018 196 aaKnown RBP2.32□□□□□ -2.04
CCL1YPR025C RPL26BP53221 127 aaKnown RBP2.32□□□□□ -2.04
CCL1YPR025C SDO1Q07953 250 aaKnown RBP2.32□□□□□ -2.04
CCL1YPR025C VPS68Q12016 184 aa2.32□□□□□ -2.04
CCL1YPR025C MED4Q12343 284 aa2.32□□□□□ -2.04
CCL1YPR025C SNF8Q12483 233 aa2.32□□□□□ -2.04
CCL1YPR025C RAD3P06839 778 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms